RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 TNRQ92752 1358 aa10.57□□□□□ -0.72
CTNNA1-210ENST00000518825 USP6P35125 1406 aa10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 TNPO1Q92973 898 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 PANK2Q9BZ23 570 aa10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
CTNNA1-210ENST00000518825 MSH6P52701 1360 aa10.55□□□□□ -0.72
CTNNA1-210ENST00000518825 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
CTNNA1-210ENST00000518825 CEP85Q6P2H3 762 aa10.55□□□□□ -0.72
CTNNA1-210ENST00000518825 ANKRD44Q8N8A2 993 aa10.55□□□□□ -0.72
CTNNA1-210ENST00000518825 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
CTNNA1-210ENST00000518825 ARXQ96QS3 562 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 MEIS3Q99687 375 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 RRAGDQ9NQL2 400 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 KIAA0232Q92628 1395 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 RAB3GAP1Q15042 981 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 SMARCA5O60264 1052 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 TTC22Q5TAA0 569 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 G2E3Q7L622 706 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
CTNNA1-210ENST00000518825 SOX12O15370 315 aa10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 CDC45O75419 566 aa10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 MTHFSDQ2M296 383 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 CEP170BQ9Y4F5 1589 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 SLC26A8Q96RN1 970 aa10.53□□□□□ -0.72
CTNNA1-210ENST00000518825 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.73
CTNNA1-210ENST00000518825 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-210ENST00000518825 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-210ENST00000518825 FMN2Q9NZ56 1722 aa10.52□□□□□ -0.73
CTNNA1-210ENST00000518825 GOLGA6L3A6NEY3 463 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 SLC4A2P04920 1241 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 L1TD1Q5T7N2 865 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 USP26Q9BXU7 913 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 F6X3S4 739 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 CEBPAP49715 358 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 GAS2L3Q86XJ1 694 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 SDSP20132 328 aa10.51□□□□□ -0.73
CTNNA1-210ENST00000518825 KDRP35968 1356 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 PTPRCP08575 1304 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 HDGFP51858 240 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 CIZ1Q9ULV3 898 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 PIK3C2AO00443 1686 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 SSFA2P28290 1259 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 AK9Q5TCS8 1911 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 APBB1O00213 710 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 EYA1Q99502 592 aa10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 MARF1Q9Y4F3 1742 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-210ENST00000518825 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
CTNNA1-210ENST00000518825 AMOTL2Q9Y2J4 779 aa10.49□□□□□ -0.73
CTNNA1-210ENST00000518825 NWD1Q149M9 1564 aa10.49□□□□□ -0.73
CTNNA1-210ENST00000518825 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
CTNNA1-210ENST00000518825 PKP1Q13835 747 aa10.48□□□□□ -0.73
CTNNA1-210ENST00000518825 LRRC37A3O60309 1634 aa10.48□□□□□ -0.73
CTNNA1-210ENST00000518825 IGSF1Q8N6C5 1336 aa10.48□□□□□ -0.73
CTNNA1-210ENST00000518825 TUBGCP6Q96RT7 1819 aa10.48□□□□□ -0.73
CTNNA1-210ENST00000518825 CLEC17AQ6ZS10 378 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 DIP2AQ14689 1571 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 SALL3Q9BXA9 1300 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 FLT4P35916 1363 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 TSPYL4Q9UJ04 414 aa10.47□□□□□ -0.73
CTNNA1-210ENST00000518825 TSHZ3Q63HK5 1081 aa10.46□□□□□ -0.73
CTNNA1-210ENST00000518825 GRPEL1Q9HAV7 217 aa10.46□□□□□ -0.73
CTNNA1-210ENST00000518825 XRN1Q8IZH2 1706 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-210ENST00000518825 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-210ENST00000518825 ARHGAP23Q9P227 1491 aa10.46□□□□□ -0.74
CTNNA1-210ENST00000518825 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.74
CTNNA1-210ENST00000518825 MRE11P49959 708 aa10.46□□□□□ -0.74
CTNNA1-210ENST00000518825 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.74
CTNNA1-210ENST00000518825 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.74
CTNNA1-210ENST00000518825 SLIT1O75093 1534 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 PNMA6EA0A0J9YXQ4 647 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 PDE1AP54750 535 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 RABEP1Q15276 862 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 EXOC6BQ9Y2D4 811 aa10.45□□□□□ -0.74
CTNNA1-210ENST00000518825 BAG4O95429 457 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 HSP90AA1P07900 732 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 ZGPATQ8N5A5 531 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 GBP4Q96PP9 640 aa10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 ZDHHC9Q9Y397 364 aa10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 HAP1P54257 671 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 NUTM2GQ5VZR2 741 aa10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 ERBB4Q15303 1308 aa10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
CTNNA1-210ENST00000518825 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
CTNNA1-210ENST00000518825 TBX22Q9Y458 520 aa10.43□□□□□ -0.74
CTNNA1-210ENST00000518825 HOXC9P31274 260 aa10.43□□□□□ -0.74
CTNNA1-210ENST00000518825 CCT4P50991 539 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms