RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
SPIDR-208ENST00000518711 PAPPAQ13219 1627 aa8.22□□□□□ -1.09
SPIDR-208ENST00000518711 EXOC5O00471 708 aa8.22□□□□□ -1.09
SPIDR-208ENST00000518711 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
SPIDR-208ENST00000518711 TOM1L2Q6ZVM7 507 aa8.22□□□□□ -1.09
SPIDR-208ENST00000518711 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
SPIDR-208ENST00000518711 CUL9Q8IWT3 2517 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 KCPQ6ZWJ8 1503 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 NLRP6P59044 892 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 ARHGEF25Q86VW2 580 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 LRRC4BQ9NT99 713 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 CCDC7Q96M83 1385 aa8.21□□□□□ -1.1
SPIDR-208ENST00000518711 VEGFBP49765 207 aa8.2□□□□□ -1.1
SPIDR-208ENST00000518711 CICQ96RK0 1608 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-208ENST00000518711 PLEKHG2Q9H7P9 1386 aa8.2□□□□□ -1.1
SPIDR-208ENST00000518711 SLIT3O75094 1523 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 FXR1P51114 621 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPIDR-208ENST00000518711 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 C9orf131Q5VYM1 1079 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 MSL1Q68DK7 614 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 ARHGAP27Q6ZUM4 889 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 RNF216Q9NWF9 866 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-208ENST00000518711 AXIN2Q9Y2T1 843 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 USP6P35125 1406 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 PPIP5K1Q6PFW1 1433 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 ABCC6O95255 1503 aa8.19□□□□□ -1.1
SPIDR-208ENST00000518711 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
SPIDR-208ENST00000518711 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
SPIDR-208ENST00000518711 TTC21AQ8NDW8 1320 aa8.18□□□□□ -1.1
SPIDR-208ENST00000518711 CENPJQ9HC77 1338 aaPredicted RBP8.18□□□□□ -1.1
SPIDR-208ENST00000518711 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
SPIDR-208ENST00000518711 COL18A1P39060 1754 aa8.17□□□□□ -1.1
SPIDR-208ENST00000518711 SOX10P56693 466 aa8.17□□□□□ -1.1
SPIDR-208ENST00000518711 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
SPIDR-208ENST00000518711 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
SPIDR-208ENST00000518711 VEGFAP15692 232 aaPredicted RBP8.16□□□□□ -1.1
SPIDR-208ENST00000518711 QSER1Q2KHR3 1735 aa8.16□□□□□ -1.1
SPIDR-208ENST00000518711 RAB3GAP2Q9H2M9 1393 aa8.16□□□□□ -1.1
SPIDR-208ENST00000518711 TTC21BQ7Z4L5 1316 aa8.15□□□□□ -1.1
SPIDR-208ENST00000518711 EVC2Q86UK5 1308 aa8.15□□□□□ -1.1
SPIDR-208ENST00000518711 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
SPIDR-208ENST00000518711 NBPF15Q8N660 670 aa8.15□□□□□ -1.1
SPIDR-208ENST00000518711 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
SPIDR-208ENST00000518711 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
SPIDR-208ENST00000518711 CSB-PGBD3P0DP91 1061 aa8.14□□□□□ -1.11
SPIDR-208ENST00000518711 IL2RBP14784 551 aa8.14□□□□□ -1.11
SPIDR-208ENST00000518711 ZNF219Q9P2Y4 722 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-208ENST00000518711 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
SPIDR-208ENST00000518711 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
SPIDR-208ENST00000518711 TNRC6CQ9HCJ0 1690 aaKnown RBP8.14□□□□□ -1.11
SPIDR-208ENST00000518711 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
SPIDR-208ENST00000518711 DGKZQ13574 1117 aa8.13□□□□□ -1.11
SPIDR-208ENST00000518711 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
SPIDR-208ENST00000518711 A0A0C4DFX4 3053 aa8.12□□□□□ -1.11
SPIDR-208ENST00000518711 ERBB3P21860 1342 aa8.12□□□□□ -1.11
SPIDR-208ENST00000518711 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-208ENST00000518711 ACSBG1Q96GR2 724 aa8.12□□□□□ -1.11
SPIDR-208ENST00000518711 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
SPIDR-208ENST00000518711 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
SPIDR-208ENST00000518711 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
SPIDR-208ENST00000518711 PUS7Q96PZ0 661 aaKnown RBP8.11□□□□□ -1.11
SPIDR-208ENST00000518711 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
SPIDR-208ENST00000518711 NFAT5O94916 1531 aa8.1□□□□□ -1.11
SPIDR-208ENST00000518711 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
SPIDR-208ENST00000518711 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
SPIDR-208ENST00000518711 NLRP2Q9NX02 1062 aa8.1□□□□□ -1.11
SPIDR-208ENST00000518711 PIK3C2AO00443 1686 aa8.1□□□□□ -1.11
SPIDR-208ENST00000518711 VIRMAQ69YN4 1812 aaKnown RBP8.1□□□□□ -1.11
SPIDR-208ENST00000518711 ZBTB22O15209 634 aa8.09□□□□□ -1.11
SPIDR-208ENST00000518711 KCNQ4P56696 695 aa8.09□□□□□ -1.11
SPIDR-208ENST00000518711 FOXD4L1Q9NU39 408 aa8.09□□□□□ -1.11
SPIDR-208ENST00000518711 SBNO2Q9Y2G9 1366 aa8.09□□□□□ -1.12
SPIDR-208ENST00000518711 QRICH2Q9H0J4 1663 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 CGNL1Q0VF96 1302 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 CHADLQ6NUI6 762 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 KTN1Q86UP2 1357 aaKnown RBP8.08□□□□□ -1.12
SPIDR-208ENST00000518711 ANKRD36BQ8N2N9 1353 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 TUBGCP6Q96RT7 1819 aa8.08□□□□□ -1.12
SPIDR-208ENST00000518711 WDR33Q9C0J8 1336 aaKnown RBP8.07□□□□□ -1.12
SPIDR-208ENST00000518711 GLTPD2A6NH11 291 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 TMEM88BA6NKF7 163 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 SLC24A1O60721 1099 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 FCHSD2O94868 740 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 DEFB115Q30KQ5 88 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 ANKRD24Q8TF21 1146 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 IP6K1Q92551 441 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 BTAF1O14981 1849 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
SPIDR-208ENST00000518711 PKD1L3Q7Z443 1732 aa8.06□□□□□ -1.12
SPIDR-208ENST00000518711 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
SPIDR-208ENST00000518711 HOXD11P31277 338 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-208ENST00000518711 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
SPIDR-208ENST00000518711 A0A0G2JLW4 131 aa8.05□□□□□ -1.12
SPIDR-208ENST00000518711 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
SPIDR-208ENST00000518711 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
SPIDR-208ENST00000518711 TERF2IPQ9NYB0 399 aa8.05□□□□□ -1.12
SPIDR-208ENST00000518711 ZC3H4Q9UPT8 1303 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms