RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 ZCRB1Q8TBF4 217 aaKnown RBP15.55■□□□□ 0.08
IGHV3-25-201ENST00000518224 KNSTRNQ9Y448 316 aa15.55■□□□□ 0.08
IGHV3-25-201ENST00000518224 KCNQ2O43526 872 aa15.54■□□□□ 0.08
IGHV3-25-201ENST00000518224 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
IGHV3-25-201ENST00000518224 USHBP1Q8N6Y0 703 aa15.53■□□□□ 0.08
IGHV3-25-201ENST00000518224 EYA1Q99502 592 aa15.53■□□□□ 0.08
IGHV3-25-201ENST00000518224 LRP5O75197 1615 aa15.53■□□□□ 0.08
IGHV3-25-201ENST00000518224 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.08
IGHV3-25-201ENST00000518224 RAPGEF4Q8WZA2 1011 aa15.52■□□□□ 0.08
IGHV3-25-201ENST00000518224 BTAF1O14981 1849 aa15.52■□□□□ 0.07
IGHV3-25-201ENST00000518224 IGSF1Q8N6C5 1336 aa15.51■□□□□ 0.07
IGHV3-25-201ENST00000518224 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
IGHV3-25-201ENST00000518224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
IGHV3-25-201ENST00000518224 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
IGHV3-25-201ENST00000518224 TATP17735 454 aaPredicted RBP15.5■□□□□ 0.07
IGHV3-25-201ENST00000518224 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
IGHV3-25-201ENST00000518224 PCDH11XQ9BZA7 1347 aa15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 PCDH11YQ9BZA8 1340 aa15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 R3HDM1Q15032 1099 aaKnown RBP15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 PAPPAQ13219 1627 aa15.49■□□□□ 0.07
IGHV3-25-201ENST00000518224 DOT1LQ8TEK3 1739 aa15.48■□□□□ 0.07
IGHV3-25-201ENST00000518224 PSDA5PKW4 1024 aaPredicted RBP15.48■□□□□ 0.07
IGHV3-25-201ENST00000518224 CYP27B1O15528 508 aa15.48■□□□□ 0.07
IGHV3-25-201ENST00000518224 ACSBG1Q96GR2 724 aa15.48■□□□□ 0.07
IGHV3-25-201ENST00000518224 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
IGHV3-25-201ENST00000518224 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
IGHV3-25-201ENST00000518224 KDRP35968 1356 aa15.47■□□□□ 0.07
IGHV3-25-201ENST00000518224 KAT6BQ8WYB5 2073 aa15.45■□□□□ 0.06
IGHV3-25-201ENST00000518224 IL13P35225 146 aa15.45■□□□□ 0.06
IGHV3-25-201ENST00000518224 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
IGHV3-25-201ENST00000518224 LY75O60449 1722 aa15.45■□□□□ 0.06
IGHV3-25-201ENST00000518224 TOGARAM1Q9Y4F4 1720 aa15.44■□□□□ 0.06
IGHV3-25-201ENST00000518224 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
IGHV3-25-201ENST00000518224 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
IGHV3-25-201ENST00000518224 LRRC4BQ9NT99 713 aa15.43■□□□□ 0.06
IGHV3-25-201ENST00000518224 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
IGHV3-25-201ENST00000518224 MTHFSP49914 203 aa15.42■□□□□ 0.06
IGHV3-25-201ENST00000518224 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
IGHV3-25-201ENST00000518224 SLC15A2Q16348 729 aa15.41■□□□□ 0.06
IGHV3-25-201ENST00000518224 PHKG2P15735 406 aa15.4■□□□□ 0.06
IGHV3-25-201ENST00000518224 CC2D1BQ5T0F9 858 aaKnown RBP15.4■□□□□ 0.06
IGHV3-25-201ENST00000518224 ITGB4P16144 1822 aa15.4■□□□□ 0.06
IGHV3-25-201ENST00000518224 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
IGHV3-25-201ENST00000518224 QSER1Q2KHR3 1735 aa15.39■□□□□ 0.05
IGHV3-25-201ENST00000518224 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
IGHV3-25-201ENST00000518224 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
IGHV3-25-201ENST00000518224 AMOTQ4VCS5 1084 aa15.37■□□□□ 0.05
IGHV3-25-201ENST00000518224 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
IGHV3-25-201ENST00000518224 STK32BQ9NY57 414 aa15.37■□□□□ 0.05
IGHV3-25-201ENST00000518224 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
IGHV3-25-201ENST00000518224 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
IGHV3-25-201ENST00000518224 SULT6B1Q6IMI4 303 aa15.36■□□□□ 0.05
IGHV3-25-201ENST00000518224 PIGBQ92521 554 aa15.36■□□□□ 0.05
IGHV3-25-201ENST00000518224 PDGFDQ9GZP0 370 aaPredicted RBP15.36■□□□□ 0.05
IGHV3-25-201ENST00000518224 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 SMARCC1Q92922 1105 aaPredicted RBP15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 SPON1Q9HCB6 807 aa15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
IGHV3-25-201ENST00000518224 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
IGHV3-25-201ENST00000518224 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
IGHV3-25-201ENST00000518224 SGIP1Q9BQI5 828 aa15.33■□□□□ 0.04
IGHV3-25-201ENST00000518224 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
IGHV3-25-201ENST00000518224 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.04
IGHV3-25-201ENST00000518224 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
IGHV3-25-201ENST00000518224 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
IGHV3-25-201ENST00000518224 CCNL1Q9UK58 526 aaPredicted RBP15.32■□□□□ 0.04
IGHV3-25-201ENST00000518224 ADAMTS7Q9UKP4 1686 aa15.32■□□□□ 0.04
IGHV3-25-201ENST00000518224 PTGER2P43116 358 aa15.31■□□□□ 0.04
IGHV3-25-201ENST00000518224 ZNF530Q6P9A1 599 aaPredicted RBP15.31■□□□□ 0.04
IGHV3-25-201ENST00000518224 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
IGHV3-25-201ENST00000518224 C5P01031 1676 aa15.31■□□□□ 0.04
IGHV3-25-201ENST00000518224 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
IGHV3-25-201ENST00000518224 KCNQ4P56696 695 aa15.3■□□□□ 0.04
IGHV3-25-201ENST00000518224 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
IGHV3-25-201ENST00000518224 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
IGHV3-25-201ENST00000518224 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
IGHV3-25-201ENST00000518224 MRC1P22897 1456 aa15.29■□□□□ 0.04
IGHV3-25-201ENST00000518224 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
IGHV3-25-201ENST00000518224 ATG3Q9NT62 314 aa15.29■□□□□ 0.04
IGHV3-25-201ENST00000518224 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
IGHV3-25-201ENST00000518224 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
IGHV3-25-201ENST00000518224 C4BP0C0L5 1744 aa15.27■□□□□ 0.04
IGHV3-25-201ENST00000518224 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
IGHV3-25-201ENST00000518224 HMOX1P09601 288 aa15.27■□□□□ 0.04
IGHV3-25-201ENST00000518224 SIK1P57059 783 aa15.27■□□□□ 0.04
IGHV3-25-201ENST00000518224 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
IGHV3-25-201ENST00000518224 CICQ96RK0 1608 aaPredicted RBP15.27■□□□□ 0.03
IGHV3-25-201ENST00000518224 ZBTB7AO95365 584 aa15.26■□□□□ 0.03
IGHV3-25-201ENST00000518224 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
IGHV3-25-201ENST00000518224 CFAP53Q96M91 514 aa15.25■□□□□ 0.03
IGHV3-25-201ENST00000518224 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
IGHV3-25-201ENST00000518224 TFCP2L1Q9NZI6 479 aa15.25■□□□□ 0.03
IGHV3-25-201ENST00000518224 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms