RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 RNF144AP50876 292 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-203ENST00000518151 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
CSMD1-203ENST00000518151 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-203ENST00000518151 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
CSMD1-203ENST00000518151 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
CSMD1-203ENST00000518151 A0A1W2PRU2 124 aa9.96□□□□□ -0.82
CSMD1-203ENST00000518151 MEN1O00255 615 aa9.96□□□□□ -0.82
CSMD1-203ENST00000518151 MYCP01106 439 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-203ENST00000518151 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-203ENST00000518151 SV2AQ7L0J3 742 aa9.96□□□□□ -0.82
CSMD1-203ENST00000518151 CEP126Q9P2H0 1117 aa9.96□□□□□ -0.82
CSMD1-203ENST00000518151 CDC14CA4D256 554 aa9.94□□□□□ -0.82
CSMD1-203ENST00000518151 CLN3Q13286 438 aa9.94□□□□□ -0.82
CSMD1-203ENST00000518151 PRICKLE2Q7Z3G6 844 aa9.94□□□□□ -0.82
CSMD1-203ENST00000518151 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
CSMD1-203ENST00000518151 TRAK2O60296 914 aa9.93□□□□□ -0.82
CSMD1-203ENST00000518151 SCTRP47872 440 aa9.93□□□□□ -0.82
CSMD1-203ENST00000518151 SLC27A3Q5K4L6 730 aa9.93□□□□□ -0.82
CSMD1-203ENST00000518151 GNRH1P01148 92 aa9.92□□□□□ -0.82
CSMD1-203ENST00000518151 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-203ENST00000518151 WASHC4Q2M389 1173 aa9.92□□□□□ -0.82
CSMD1-203ENST00000518151 VWA5B2Q8N398 1253 aa9.92□□□□□ -0.82
CSMD1-203ENST00000518151 GPR161Q8N6U8 529 aaKnown RBP9.92□□□□□ -0.82
CSMD1-203ENST00000518151 COL25A1Q9BXS0 654 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-203ENST00000518151 OSBPL3Q9H4L5 887 aa9.92□□□□□ -0.82
CSMD1-203ENST00000518151 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
CSMD1-203ENST00000518151 GMCL1Q96IK5 515 aa9.91□□□□□ -0.82
CSMD1-203ENST00000518151 CNTNAP3BQ96NU0 1288 aa9.91□□□□□ -0.82
CSMD1-203ENST00000518151 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
CSMD1-203ENST00000518151 IRF5Q13568 498 aa9.9□□□□□ -0.82
CSMD1-203ENST00000518151 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.82
CSMD1-203ENST00000518151 ARHGEF10LQ9HCE6 1279 aa9.9□□□□□ -0.82
CSMD1-203ENST00000518151 ABL2P42684 1182 aa9.89□□□□□ -0.83
CSMD1-203ENST00000518151 WDR44Q5JSH3 913 aa9.89□□□□□ -0.83
CSMD1-203ENST00000518151 SIRT1Q96EB6 747 aa9.89□□□□□ -0.83
CSMD1-203ENST00000518151 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
CSMD1-203ENST00000518151 RHOQP17081 205 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 SOX11P35716 441 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 KRT76Q01546 638 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 USP4Q13107 963 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 MCM6Q14566 821 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 FOXR1Q6PIV2 292 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
CSMD1-203ENST00000518151 GRIP2Q9C0E4 1043 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 DYRK1BQ9Y463 629 aa9.88□□□□□ -0.83
CSMD1-203ENST00000518151 H7C1W4 665 aa9.87□□□□□ -0.83
CSMD1-203ENST00000518151 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
CSMD1-203ENST00000518151 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
CSMD1-203ENST00000518151 SPATA31C2B4DYI2 1134 aa9.86□□□□□ -0.83
CSMD1-203ENST00000518151 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-203ENST00000518151 VAC14Q08AM6 782 aa9.86□□□□□ -0.83
CSMD1-203ENST00000518151 WWC1Q8IX03 1113 aa9.86□□□□□ -0.83
CSMD1-203ENST00000518151 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
CSMD1-203ENST00000518151 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
CSMD1-203ENST00000518151 POU4F2Q12837 409 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 RNFT1Q5M7Z0 435 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 NBPF10Q6P3W6 841 aaKnown RBP9.85□□□□□ -0.83
CSMD1-203ENST00000518151 RIPOR1Q6ZS17 1223 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 TAS1R3Q7RTX0 852 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 PHTF2Q8N3S3 785 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 NBPF15Q8N660 670 aa9.85□□□□□ -0.83
CSMD1-203ENST00000518151 CDCA7Q9BWT1 371 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-203ENST00000518151 SEMA3FQ13275 785 aa9.84□□□□□ -0.83
CSMD1-203ENST00000518151 RAB6BQ9NRW1 208 aa9.84□□□□□ -0.83
CSMD1-203ENST00000518151 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-203ENST00000518151 SLURP2P0DP57 97 aa9.83□□□□□ -0.84
CSMD1-203ENST00000518151 MAP7D1Q3KQU3 841 aa9.83□□□□□ -0.84
CSMD1-203ENST00000518151 TIMMDC1Q9NPL8 285 aa9.83□□□□□ -0.84
CSMD1-203ENST00000518151 IL2RAP01589 272 aa9.82□□□□□ -0.84
CSMD1-203ENST00000518151 CENPCQ03188 943 aa9.82□□□□□ -0.84
CSMD1-203ENST00000518151 ZNF837Q96EG3 531 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-203ENST00000518151 XAGE2Q96GT9 111 aa9.82□□□□□ -0.84
CSMD1-203ENST00000518151 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-203ENST00000518151 GAS2L1Q99501 681 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-203ENST00000518151 CUEDC1Q9NWM3 386 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-203ENST00000518151 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
CSMD1-203ENST00000518151 SRSF11Q05519 484 aaKnown RBP9.81□□□□□ -0.84
CSMD1-203ENST00000518151 OXLD1Q5BKU9 147 aa9.81□□□□□ -0.84
CSMD1-203ENST00000518151 GNASQ5JWF2 1037 aa9.81□□□□□ -0.84
CSMD1-203ENST00000518151 SVOPQ8N4V2 548 aa9.81□□□□□ -0.84
CSMD1-203ENST00000518151 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
CSMD1-203ENST00000518151 F11P03951 625 aa9.8□□□□□ -0.84
CSMD1-203ENST00000518151 RNF225M0QZC1 329 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-203ENST00000518151 TMEM214Q6NUQ4 689 aaKnown RBP9.79□□□□□ -0.84
CSMD1-203ENST00000518151 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
CSMD1-203ENST00000518151 A0A1B0GTH6 734 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 RAD21O60216 631 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 ADAMTS2O95450 1211 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 FLIIQ13045 1269 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 DBN1Q16643 649 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 TSGA10IPQ3SY00 556 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-203ENST00000518151 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 MBIPQ9NS73 344 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
CSMD1-203ENST00000518151 FHDC1Q9C0D6 1143 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-203ENST00000518151 NUCKS1Q9H1E3 243 aaKnown RBP9.77□□□□□ -0.85
CSMD1-203ENST00000518151 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
CSMD1-203ENST00000518151 GAS6Q14393 721 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms