RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 RREB1Q92766 1687 aa17.19■□□□□ 0.34
PDGFRB-204ENST00000517957 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
PDGFRB-204ENST00000517957 NSD2O96028 1365 aa17.18■□□□□ 0.34
PDGFRB-204ENST00000517957 PROM2Q8N271 834 aa17.18■□□□□ 0.34
PDGFRB-204ENST00000517957 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
PDGFRB-204ENST00000517957 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
PDGFRB-204ENST00000517957 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
PDGFRB-204ENST00000517957 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
PDGFRB-204ENST00000517957 MEGF6O75095 1541 aa17.16■□□□□ 0.34
PDGFRB-204ENST00000517957 PRIM1P49642 420 aaKnown RBP17.15■□□□□ 0.34
PDGFRB-204ENST00000517957 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
PDGFRB-204ENST00000517957 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
PDGFRB-204ENST00000517957 EYA1Q99502 592 aa17.14■□□□□ 0.33
PDGFRB-204ENST00000517957 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
PDGFRB-204ENST00000517957 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
PDGFRB-204ENST00000517957 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
PDGFRB-204ENST00000517957 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
PDGFRB-204ENST00000517957 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
PDGFRB-204ENST00000517957 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
PDGFRB-204ENST00000517957 BTAF1O14981 1849 aa17.11■□□□□ 0.33
PDGFRB-204ENST00000517957 LRP5O75197 1615 aa17.1■□□□□ 0.33
PDGFRB-204ENST00000517957 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
PDGFRB-204ENST00000517957 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
PDGFRB-204ENST00000517957 SPON1Q9HCB6 807 aa17.1■□□□□ 0.33
PDGFRB-204ENST00000517957 SLC27A3Q5K4L6 730 aa17.09■□□□□ 0.33
PDGFRB-204ENST00000517957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDGFRB-204ENST00000517957 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
PDGFRB-204ENST00000517957 CYP27B1O15528 508 aa17.08■□□□□ 0.32
PDGFRB-204ENST00000517957 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
PDGFRB-204ENST00000517957 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
PDGFRB-204ENST00000517957 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
PDGFRB-204ENST00000517957 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
PDGFRB-204ENST00000517957 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
PDGFRB-204ENST00000517957 PPP1R1BQ9UD71 204 aaPredicted RBP17.06■□□□□ 0.32
PDGFRB-204ENST00000517957 DOT1LQ8TEK3 1739 aa17.06■□□□□ 0.32
PDGFRB-204ENST00000517957 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
PDGFRB-204ENST00000517957 IGSF1Q8N6C5 1336 aa17.04■□□□□ 0.32
PDGFRB-204ENST00000517957 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
PDGFRB-204ENST00000517957 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
PDGFRB-204ENST00000517957 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
PDGFRB-204ENST00000517957 MTHFSP49914 203 aa17.03■□□□□ 0.32
PDGFRB-204ENST00000517957 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
PDGFRB-204ENST00000517957 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
PDGFRB-204ENST00000517957 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
PDGFRB-204ENST00000517957 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
PDGFRB-204ENST00000517957 PHKG2P15735 406 aa17.02■□□□□ 0.32
PDGFRB-204ENST00000517957 KCNQ4P56696 695 aa17.02■□□□□ 0.32
PDGFRB-204ENST00000517957 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
PDGFRB-204ENST00000517957 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
PDGFRB-204ENST00000517957 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
PDGFRB-204ENST00000517957 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
PDGFRB-204ENST00000517957 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
PDGFRB-204ENST00000517957 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
PDGFRB-204ENST00000517957 IL13P35225 146 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 ZNF827Q17R98 1081 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 AKT1S1Q96B36 256 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
PDGFRB-204ENST00000517957 PIGBQ92521 554 aa16.99■□□□□ 0.31
PDGFRB-204ENST00000517957 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
PDGFRB-204ENST00000517957 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
PDGFRB-204ENST00000517957 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
PDGFRB-204ENST00000517957 CASZ1Q86V15 1759 aa16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 LY75O60449 1722 aa16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 ITGB4P16144 1822 aa16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
PDGFRB-204ENST00000517957 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
PDGFRB-204ENST00000517957 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
PDGFRB-204ENST00000517957 PAPPAQ13219 1627 aa16.96■□□□□ 0.3
PDGFRB-204ENST00000517957 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
PDGFRB-204ENST00000517957 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
PDGFRB-204ENST00000517957 MSH5O43196 834 aa16.94■□□□□ 0.3
PDGFRB-204ENST00000517957 PTGER2P43116 358 aa16.94■□□□□ 0.3
PDGFRB-204ENST00000517957 KDRP35968 1356 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 HMOX1P09601 288 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 CABP4P57796 275 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
PDGFRB-204ENST00000517957 LOC102724428A0A0B4J2F2 783 aa16.92■□□□□ 0.3
PDGFRB-204ENST00000517957 SIK1P57059 783 aa16.92■□□□□ 0.3
PDGFRB-204ENST00000517957 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
PDGFRB-204ENST00000517957 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
PDGFRB-204ENST00000517957 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 POLD1P28340 1107 aa16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 AK7Q96M32 723 aa16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 ARXQ96QS3 562 aa16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
PDGFRB-204ENST00000517957 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
PDGFRB-204ENST00000517957 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
PDGFRB-204ENST00000517957 SGIP1Q9BQI5 828 aa16.89■□□□□ 0.29
PDGFRB-204ENST00000517957 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
PDGFRB-204ENST00000517957 NFATC2IPQ8NCF5 419 aa16.88■□□□□ 0.29
PDGFRB-204ENST00000517957 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
PDGFRB-204ENST00000517957 C5P01031 1676 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms