RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 C5P01031 1676 aa12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
LINCR-0001-201ENST00000517732 NLGN2Q8NFZ4 835 aa12.86□□□□□ -0.35
LINCR-0001-201ENST00000517732 IP6K1Q92551 441 aa12.86□□□□□ -0.35
LINCR-0001-201ENST00000517732 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
LINCR-0001-201ENST00000517732 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
LINCR-0001-201ENST00000517732 USP47Q96K76 1375 aa12.85□□□□□ -0.35
LINCR-0001-201ENST00000517732 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
LINCR-0001-201ENST00000517732 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
LINCR-0001-201ENST00000517732 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
LINCR-0001-201ENST00000517732 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 AMPHP49418 695 aa12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 KCNQ4P56696 695 aa12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
LINCR-0001-201ENST00000517732 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
LINCR-0001-201ENST00000517732 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINCR-0001-201ENST00000517732 COG3Q96JB2 828 aa12.82□□□□□ -0.36
LINCR-0001-201ENST00000517732 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
LINCR-0001-201ENST00000517732 NSD2O96028 1365 aa12.81□□□□□ -0.36
LINCR-0001-201ENST00000517732 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
LINCR-0001-201ENST00000517732 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
LINCR-0001-201ENST00000517732 ITGB4P16144 1822 aa12.81□□□□□ -0.36
LINCR-0001-201ENST00000517732 MEGF6O75095 1541 aa12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 HOXC9P31274 260 aa12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 RTL1A6NKG5 1358 aa12.8□□□□□ -0.36
LINCR-0001-201ENST00000517732 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
LINCR-0001-201ENST00000517732 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
LINCR-0001-201ENST00000517732 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
LINCR-0001-201ENST00000517732 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
LINCR-0001-201ENST00000517732 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
LINCR-0001-201ENST00000517732 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
LINCR-0001-201ENST00000517732 C4BP0C0L5 1744 aa12.77□□□□□ -0.36
LINCR-0001-201ENST00000517732 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.37
LINCR-0001-201ENST00000517732 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
LINCR-0001-201ENST00000517732 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
LINCR-0001-201ENST00000517732 NSD3Q9BZ95 1437 aa12.77□□□□□ -0.37
LINCR-0001-201ENST00000517732 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
LINCR-0001-201ENST00000517732 HSPA6P17066 643 aa12.76□□□□□ -0.37
LINCR-0001-201ENST00000517732 AK7Q96M32 723 aa12.76□□□□□ -0.37
LINCR-0001-201ENST00000517732 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
LINCR-0001-201ENST00000517732 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
LINCR-0001-201ENST00000517732 ADCY9O60503 1353 aa12.74□□□□□ -0.37
LINCR-0001-201ENST00000517732 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
LINCR-0001-201ENST00000517732 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
LINCR-0001-201ENST00000517732 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
LINCR-0001-201ENST00000517732 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
LINCR-0001-201ENST00000517732 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
LINCR-0001-201ENST00000517732 PHF14O94880 888 aa12.71□□□□□ -0.37
LINCR-0001-201ENST00000517732 FBLN1P23142 703 aa12.71□□□□□ -0.37
LINCR-0001-201ENST00000517732 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
LINCR-0001-201ENST00000517732 INSRP06213 1382 aa12.7□□□□□ -0.38
LINCR-0001-201ENST00000517732 FLT4P35916 1363 aa12.7□□□□□ -0.38
LINCR-0001-201ENST00000517732 GOLGB1Q14789 3259 aaKnown RBP12.7□□□□□ -0.38
LINCR-0001-201ENST00000517732 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
LINCR-0001-201ENST00000517732 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
LINCR-0001-201ENST00000517732 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 SSFA2P28290 1259 aa12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
LINCR-0001-201ENST00000517732 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
LINCR-0001-201ENST00000517732 FYB1O15117 783 aa12.67□□□□□ -0.38
LINCR-0001-201ENST00000517732 TESK2Q96S53 571 aa12.67□□□□□ -0.38
LINCR-0001-201ENST00000517732 CYP27B1O15528 508 aa12.66□□□□□ -0.38
LINCR-0001-201ENST00000517732 APLP1P51693 650 aa12.66□□□□□ -0.38
LINCR-0001-201ENST00000517732 TMF1P82094 1093 aa12.66□□□□□ -0.38
LINCR-0001-201ENST00000517732 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
LINCR-0001-201ENST00000517732 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
LINCR-0001-201ENST00000517732 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
LINCR-0001-201ENST00000517732 KIF3CO14782 793 aa12.65□□□□□ -0.38
LINCR-0001-201ENST00000517732 SIK1P57059 783 aa12.65□□□□□ -0.38
LINCR-0001-201ENST00000517732 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
LINCR-0001-201ENST00000517732 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
LINCR-0001-201ENST00000517732 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 GNPATO15228 680 aa12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 PIGBQ92521 554 aa12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 KIAA1551Q9HCM1 1747 aa12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 ARFGEF1Q9Y6D6 1849 aa12.64□□□□□ -0.39
LINCR-0001-201ENST00000517732 CEP350Q5VT06 3117 aa12.63□□□□□ -0.39
LINCR-0001-201ENST00000517732 TOMM70O94826 608 aa12.63□□□□□ -0.39
LINCR-0001-201ENST00000517732 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
LINCR-0001-201ENST00000517732 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
LINCR-0001-201ENST00000517732 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms