RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 USP47Q96K76 1375 aa14.8□□□□□ -0.04
PDGFRB-203ENST00000517660 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
PDGFRB-203ENST00000517660 ABCC6O95255 1503 aa14.8□□□□□ -0.04
PDGFRB-203ENST00000517660 A0A1W2PP64 1363 aa14.79□□□□□ -0.04
PDGFRB-203ENST00000517660 PIK3C2AO00443 1686 aa14.79□□□□□ -0.04
PDGFRB-203ENST00000517660 EXOC5O00471 708 aa14.79□□□□□ -0.04
PDGFRB-203ENST00000517660 CDCA8Q53HL2 280 aa14.79□□□□□ -0.04
PDGFRB-203ENST00000517660 APLP1P51693 650 aa14.78□□□□□ -0.04
PDGFRB-203ENST00000517660 RGPD5Q99666 1765 aa14.78□□□□□ -0.04
PDGFRB-203ENST00000517660 PCNTO95613 3336 aa14.77□□□□□ -0.04
PDGFRB-203ENST00000517660 PRELPP51888 382 aa14.77□□□□□ -0.05
PDGFRB-203ENST00000517660 KCNQ4P56696 695 aa14.77□□□□□ -0.05
PDGFRB-203ENST00000517660 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
PDGFRB-203ENST00000517660 COG3Q96JB2 828 aa14.75□□□□□ -0.05
PDGFRB-203ENST00000517660 SLC34A2O95436 690 aa14.74□□□□□ -0.05
PDGFRB-203ENST00000517660 NFAT5O94916 1531 aa14.74□□□□□ -0.05
PDGFRB-203ENST00000517660 ANKRD36BQ8N2N9 1353 aa14.73□□□□□ -0.05
PDGFRB-203ENST00000517660 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
PDGFRB-203ENST00000517660 HTRA3P83110 453 aa14.73□□□□□ -0.05
PDGFRB-203ENST00000517660 JMYQ8N9B5 988 aa14.73□□□□□ -0.05
PDGFRB-203ENST00000517660 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 TNS4Q8IZW8 715 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 IP6K1Q92551 441 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 NLRP2Q9NX02 1062 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 TFCP2L1Q9NZI6 479 aa14.72□□□□□ -0.05
PDGFRB-203ENST00000517660 ERBB3P21860 1342 aa14.71□□□□□ -0.05
PDGFRB-203ENST00000517660 MSL1Q68DK7 614 aa14.71□□□□□ -0.05
PDGFRB-203ENST00000517660 COL23A1Q86Y22 540 aaPredicted RBP14.71□□□□□ -0.05
PDGFRB-203ENST00000517660 WDR90Q96KV7 1748 aa14.71□□□□□ -0.05
PDGFRB-203ENST00000517660 FYB1O15117 783 aa14.7□□□□□ -0.06
PDGFRB-203ENST00000517660 NSD2O96028 1365 aa14.7□□□□□ -0.06
PDGFRB-203ENST00000517660 KLRG1Q96E93 195 aa14.69□□□□□ -0.06
PDGFRB-203ENST00000517660 CD2APQ9Y5K6 639 aa14.69□□□□□ -0.06
PDGFRB-203ENST00000517660 AMPHP49418 695 aa14.68□□□□□ -0.06
PDGFRB-203ENST00000517660 GGNBP2Q9H3C7 697 aa14.68□□□□□ -0.06
PDGFRB-203ENST00000517660 WWC3Q9ULE0 1092 aa14.68□□□□□ -0.06
PDGFRB-203ENST00000517660 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 CICQ96RK0 1608 aaPredicted RBP14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 LY75O60449 1722 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 TOMM70O94826 608 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 IL2RBP14784 551 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 FBLN1P23142 703 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 HOXC9P31274 260 aa14.67□□□□□ -0.06
PDGFRB-203ENST00000517660 USP54Q70EL1 1684 aa14.66□□□□□ -0.06
PDGFRB-203ENST00000517660 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDGFRB-203ENST00000517660 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
PDGFRB-203ENST00000517660 CARD14Q9BXL6 1004 aa14.66□□□□□ -0.06
PDGFRB-203ENST00000517660 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
PDGFRB-203ENST00000517660 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
PDGFRB-203ENST00000517660 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
PDGFRB-203ENST00000517660 NMRK2Q9NPI5 230 aa14.63□□□□□ -0.07
PDGFRB-203ENST00000517660 POLR3GLQ9BT43 218 aa14.62□□□□□ -0.07
PDGFRB-203ENST00000517660 MSH5O43196 834 aa14.61□□□□□ -0.07
PDGFRB-203ENST00000517660 AMIGO3Q86WK7 504 aa14.61□□□□□ -0.07
PDGFRB-203ENST00000517660 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
PDGFRB-203ENST00000517660 RTL1A6NKG5 1358 aa14.6□□□□□ -0.07
PDGFRB-203ENST00000517660 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
PDGFRB-203ENST00000517660 PRIM1P49642 420 aaKnown RBP14.6□□□□□ -0.07
PDGFRB-203ENST00000517660 CCNL1Q9UK58 526 aaPredicted RBP14.59□□□□□ -0.07
PDGFRB-203ENST00000517660 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
PDGFRB-203ENST00000517660 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.07
PDGFRB-203ENST00000517660 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 KIF24Q5T7B8 1368 aa14.58□□□□□ -0.08
PDGFRB-203ENST00000517660 ZCRB1Q8TBF4 217 aaKnown RBP14.57□□□□□ -0.08
PDGFRB-203ENST00000517660 INSRP06213 1382 aa14.57□□□□□ -0.08
PDGFRB-203ENST00000517660 KIAA1551Q9HCM1 1747 aa14.56□□□□□ -0.08
PDGFRB-203ENST00000517660 LTN1O94822 1766 aa14.56□□□□□ -0.08
PDGFRB-203ENST00000517660 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
PDGFRB-203ENST00000517660 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
PDGFRB-203ENST00000517660 FLT4P35916 1363 aa14.56□□□□□ -0.08
PDGFRB-203ENST00000517660 C5P01031 1676 aa14.55□□□□□ -0.08
PDGFRB-203ENST00000517660 RAPGEF4Q8WZA2 1011 aa14.55□□□□□ -0.08
PDGFRB-203ENST00000517660 PANK3Q9H999 370 aa14.55□□□□□ -0.08
PDGFRB-203ENST00000517660 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
PDGFRB-203ENST00000517660 SMG6Q86US8 1419 aaKnown RBP14.55□□□□□ -0.08
PDGFRB-203ENST00000517660 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
PDGFRB-203ENST00000517660 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
PDGFRB-203ENST00000517660 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
PDGFRB-203ENST00000517660 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
PDGFRB-203ENST00000517660 PXDNLA1KZ92 1463 aa14.53□□□□□ -0.08
PDGFRB-203ENST00000517660 TATP17735 454 aaPredicted RBP14.53□□□□□ -0.08
PDGFRB-203ENST00000517660 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.08
PDGFRB-203ENST00000517660 FSTL1Q12841 308 aa14.52□□□□□ -0.09
PDGFRB-203ENST00000517660 POLKQ9UBT6 870 aa14.52□□□□□ -0.09
PDGFRB-203ENST00000517660 FAM208AQ9UK61 1670 aaKnown RBP14.51□□□□□ -0.09
PDGFRB-203ENST00000517660 KAT6BQ8WYB5 2073 aa14.5□□□□□ -0.09
PDGFRB-203ENST00000517660 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
PDGFRB-203ENST00000517660 TNNT2P45379 298 aaPredicted RBP14.49□□□□□ -0.09
PDGFRB-203ENST00000517660 MEGF6O75095 1541 aa14.49□□□□□ -0.09
PDGFRB-203ENST00000517660 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
PDGFRB-203ENST00000517660 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
PDGFRB-203ENST00000517660 EYA1Q99502 592 aa14.48□□□□□ -0.09
PDGFRB-203ENST00000517660 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
PDGFRB-203ENST00000517660 C10orf71Q711Q0 1435 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms