RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PSMA5P28066 241 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC30Q5VVM6 783 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-203ENST00000517490 TTC37Q6PGP7 1564 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 PTPRCP08575 1304 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 MX1P20591 662 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 ZSCAN31Q96LW9 406 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-203ENST00000517490 PRDM10Q9NQV6 1147 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 MBIPQ9NS73 344 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 ADCY5O95622 1261 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 IFIT2P09913 472 aaKnown RBP7.97□□□□□ -1.13
CPNE3-203ENST00000517490 CCDC112Q8NEF3 446 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 LMBRD1Q9NUN5 540 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 CHD1O14646 1710 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 ECM2O94769 699 aaPredicted RBP7.97□□□□□ -1.13
CPNE3-203ENST00000517490 ANAPC15P60006 121 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 KRT85P78386 507 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 NOLC1Q14978 699 aaKnown RBP eCLIP7.97□□□□□ -1.135e-11■■■■■ 37.1
CPNE3-203ENST00000517490 TRAPPC8Q9Y2L5 1435 aa7.97□□□□□ -1.13
CPNE3-203ENST00000517490 VAMP4O75379 141 aa7.96□□□□□ -1.13
CPNE3-203ENST00000517490 CBX1P83916 185 aa7.96□□□□□ -1.13
CPNE3-203ENST00000517490 TRIM35Q9UPQ4 493 aa7.96□□□□□ -1.13
CPNE3-203ENST00000517490 RAD21O60216 631 aa7.96□□□□□ -1.13
CPNE3-203ENST00000517490 TNNT3P45378 269 aaPredicted RBP7.96□□□□□ -1.13
CPNE3-203ENST00000517490 SURF6O75683 361 aaKnown RBP7.96□□□□□ -1.14
CPNE3-203ENST00000517490 TEX35Q5T0J7 233 aa7.96□□□□□ -1.14
CPNE3-203ENST00000517490 CYP46A1Q9Y6A2 500 aa7.96□□□□□ -1.14
CPNE3-203ENST00000517490 ERVK-7P63135 1459 aa7.96□□□□□ -1.14
CPNE3-203ENST00000517490 ABCA8O94911 1581 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 FYB1O15117 783 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 INTS4Q96HW7 963 aaKnown RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 UPF3BQ9BZI7 483 aaKnown RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 NUP62CLQ9H1M0 184 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 TNMDQ9H2S6 317 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 E9PCH4 1651 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 SAMD9LQ8IVG5 1584 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 CFAP74Q9C0B2 1584 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 ADGRL1O94910 1474 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 ZBTB22O15209 634 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 UBE2HP62256 183 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 SF3A1Q15459 793 aaKnown RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 ZGPATQ8N5A5 531 aaKnown RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 CCDC73Q6ZRK6 1079 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 ARGLU1Q9NWB6 273 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 ZNF518AQ6AHZ1 1483 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 HIP1O00291 1037 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 GTPBP4Q9BZE4 634 aaKnown RBP7.95□□□□□ -1.14
CPNE3-203ENST00000517490 EXOC6BQ9Y2D4 811 aa7.95□□□□□ -1.14
CPNE3-203ENST00000517490 NECTIN2Q92692 538 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 NAT10Q9H0A0 1025 aaKnown RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 ANKRD1Q15327 319 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 CLASRPQ8N2M8 674 aaKnown RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 ZNF692Q9BU19 519 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 ZFYVE9O95405 1425 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 LIMCH1Q9UPQ0 1083 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 TRPM2O94759 1503 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 IQGAP3Q86VI3 1631 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 PLXNC1O60486 1568 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 ERBB4Q15303 1308 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 DHX8Q14562 1220 aaKnown RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 LARP1BQ659C4 914 aaKnown RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 PDRG1Q9NUG6 133 aa7.94□□□□□ -1.14
CPNE3-203ENST00000517490 C9orf78Q9NZ63 289 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-203ENST00000517490 PDE1AP54750 535 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 PDE4CQ08493 712 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 USP48Q86UV5 1035 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 NGDNQ8NEJ9 315 aaKnown RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 ESYT1Q9BSJ8 1104 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 SH2B1Q9NRF2 756 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 ZHX1Q9UKY1 873 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 RAB11FIP3O75154 756 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 C16orf71Q8IYS4 520 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 MYRIPQ8NFW9 859 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 CGNQ9P2M7 1197 aaKnown RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 CDC42BPAQ5VT25 1732 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 UNC13BO14795 1591 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 FANCAO15360 1455 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 KIF24Q5T7B8 1368 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 STX6O43752 255 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-203ENST00000517490 GPS2Q13227 327 aa7.93□□□□□ -1.14
CPNE3-203ENST00000517490 MLECQ14165 292 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 HOMER1Q86YM7 354 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 ZSCAN22P10073 491 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-203ENST00000517490 G3BP1Q13283 466 aaKnown RBP eCLIP7.92□□□□□ -1.14
CPNE3-203ENST00000517490 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 CEP85Q6P2H3 762 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 A0A1W2PP64 1363 aa7.92□□□□□ -1.14
CPNE3-203ENST00000517490 MYOM2P54296 1465 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms