RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
PABPC1-202ENST00000517403 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
PABPC1-202ENST00000517403 IP6K1Q92551 441 aa12.22□□□□□ -0.45
PABPC1-202ENST00000517403 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-202ENST00000517403 NSD3Q9BZ95 1437 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 KCNQ4P56696 695 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 TERF2IPQ9NYB0 399 aa12.21□□□□□ -0.45
PABPC1-202ENST00000517403 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
PABPC1-202ENST00000517403 IL2RBP14784 551 aa12.2□□□□□ -0.46
PABPC1-202ENST00000517403 PTGER2P43116 358 aa12.19□□□□□ -0.46
PABPC1-202ENST00000517403 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
PABPC1-202ENST00000517403 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
PABPC1-202ENST00000517403 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-202ENST00000517403 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
PABPC1-202ENST00000517403 EXOC5O00471 708 aa12.18□□□□□ -0.46
PABPC1-202ENST00000517403 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
PABPC1-202ENST00000517403 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
PABPC1-202ENST00000517403 ITGB4P16144 1822 aa12.18□□□□□ -0.46
PABPC1-202ENST00000517403 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
PABPC1-202ENST00000517403 TAF1LQ8IZX4 1826 aa12.17□□□□□ -0.46
PABPC1-202ENST00000517403 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
PABPC1-202ENST00000517403 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
PABPC1-202ENST00000517403 COG3Q96JB2 828 aa12.16□□□□□ -0.46
PABPC1-202ENST00000517403 C5P01031 1676 aa12.16□□□□□ -0.46
PABPC1-202ENST00000517403 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-202ENST00000517403 TMF1P82094 1093 aa12.15□□□□□ -0.46
PABPC1-202ENST00000517403 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
PABPC1-202ENST00000517403 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
PABPC1-202ENST00000517403 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
PABPC1-202ENST00000517403 INSRP06213 1382 aa12.14□□□□□ -0.47
PABPC1-202ENST00000517403 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
PABPC1-202ENST00000517403 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
PABPC1-202ENST00000517403 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
PABPC1-202ENST00000517403 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
PABPC1-202ENST00000517403 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
PABPC1-202ENST00000517403 AMPHP49418 695 aa12.12□□□□□ -0.47
PABPC1-202ENST00000517403 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
PABPC1-202ENST00000517403 FLT4P35916 1363 aa12.12□□□□□ -0.47
PABPC1-202ENST00000517403 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
PABPC1-202ENST00000517403 CYP27B1O15528 508 aa12.11□□□□□ -0.47
PABPC1-202ENST00000517403 HSPA5P11021 654 aaKnown RBP12.11□□□□□ -0.47
PABPC1-202ENST00000517403 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
PABPC1-202ENST00000517403 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-202ENST00000517403 SMIM5Q71RC9 77 aa12.1□□□□□ -0.47
PABPC1-202ENST00000517403 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
PABPC1-202ENST00000517403 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
PABPC1-202ENST00000517403 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
PABPC1-202ENST00000517403 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
PABPC1-202ENST00000517403 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-202ENST00000517403 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
PABPC1-202ENST00000517403 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
PABPC1-202ENST00000517403 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
PABPC1-202ENST00000517403 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
PABPC1-202ENST00000517403 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
PABPC1-202ENST00000517403 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
PABPC1-202ENST00000517403 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-202ENST00000517403 EYA1Q99502 592 aa12.06□□□□□ -0.48
PABPC1-202ENST00000517403 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
PABPC1-202ENST00000517403 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-202ENST00000517403 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
PABPC1-202ENST00000517403 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-202ENST00000517403 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-202ENST00000517403 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
PABPC1-202ENST00000517403 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
PABPC1-202ENST00000517403 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-202ENST00000517403 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
PABPC1-202ENST00000517403 PALLDQ8WX93 1383 aa12.04□□□□□ -0.48
PABPC1-202ENST00000517403 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
PABPC1-202ENST00000517403 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
PABPC1-202ENST00000517403 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
PABPC1-202ENST00000517403 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
PABPC1-202ENST00000517403 TJP1Q07157 1748 aa12.03□□□□□ -0.48
PABPC1-202ENST00000517403 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-202ENST00000517403 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-202ENST00000517403 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 PANK3Q9H999 370 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 C4AP0C0L4 1744 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 KDRP35968 1356 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
PABPC1-202ENST00000517403 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.49
PABPC1-202ENST00000517403 UTRNP46939 3433 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-202ENST00000517403 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 PIGBQ92521 554 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-202ENST00000517403 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
PABPC1-202ENST00000517403 ITPK1Q13572 414 aa12□□□□□ -0.49
PABPC1-202ENST00000517403 CDCA8Q53HL2 280 aa12□□□□□ -0.49
PABPC1-202ENST00000517403 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
PABPC1-202ENST00000517403 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
PABPC1-202ENST00000517403 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms