RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
HOXA11-202ENST00000517402 RTL1A6NKG5 1358 aa25.01■■□□□ 1.59
HOXA11-202ENST00000517402 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
HOXA11-202ENST00000517402 ARHGAP45Q92619 1136 aa25■■□□□ 1.59
HOXA11-202ENST00000517402 GAS2L2Q8NHY3 880 aa24.98■■□□□ 1.59
HOXA11-202ENST00000517402 ABCC4O15439 1325 aa24.98■■□□□ 1.59
HOXA11-202ENST00000517402 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
HOXA11-202ENST00000517402 HDAC1Q13547 482 aaPredicted RBP24.97■■□□□ 1.59
HOXA11-202ENST00000517402 LRRC37A3O60309 1634 aa24.97■■□□□ 1.59
HOXA11-202ENST00000517402 RGPD2P0DJD1 1756 aa24.97■■□□□ 1.59
HOXA11-202ENST00000517402 LMOD2Q6P5Q4 547 aa24.97■■□□□ 1.59
HOXA11-202ENST00000517402 IP6K1Q92551 441 aa24.96■■□□□ 1.59
HOXA11-202ENST00000517402 TRPM3Q9HCF6 1732 aaPredicted RBP24.96■■□□□ 1.59
HOXA11-202ENST00000517402 KIAA0232Q92628 1395 aa24.96■■□□□ 1.59
HOXA11-202ENST00000517402 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
HOXA11-202ENST00000517402 C1orf115Q9H7X2 142 aa24.95■■□□□ 1.59
HOXA11-202ENST00000517402 TSPYL4Q9UJ04 414 aa24.95■■□□□ 1.58
HOXA11-202ENST00000517402 ZBTB7BO15156 539 aaPredicted RBP24.94■■□□□ 1.58
HOXA11-202ENST00000517402 HSPA2P54652 639 aa24.94■■□□□ 1.58
HOXA11-202ENST00000517402 MSH6P52701 1360 aa24.94■■□□□ 1.58
HOXA11-202ENST00000517402 ZBTB47Q9UFB7 747 aaPredicted RBP24.94■■□□□ 1.58
HOXA11-202ENST00000517402 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
HOXA11-202ENST00000517402 NBPF6Q5VWK0 638 aa24.92■■□□□ 1.58
HOXA11-202ENST00000517402 NBPF4Q96M43 638 aa24.92■■□□□ 1.58
HOXA11-202ENST00000517402 C19orf44Q9H6X5 657 aa24.92■■□□□ 1.58
HOXA11-202ENST00000517402 PHRF1Q9P1Y6 1649 aaKnown RBP24.92■■□□□ 1.58
HOXA11-202ENST00000517402 GNAT3A8MTJ3 354 aa24.92■■□□□ 1.58
HOXA11-202ENST00000517402 RGS12O14924 1447 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 GCP02774 474 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 API5Q9BZZ5 524 aaKnown RBP24.91■■□□□ 1.58
HOXA11-202ENST00000517402 SLIT3O75094 1523 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 KIF1AQ12756 1690 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 TMEM94Q12767 1356 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 MAP3K5Q99683 1374 aa24.91■■□□□ 1.58
HOXA11-202ENST00000517402 LRRC59Q96AG4 307 aaKnown RBP24.91■■□□□ 1.58
HOXA11-202ENST00000517402 SMC5Q8IY18 1101 aa24.89■■□□□ 1.58
HOXA11-202ENST00000517402 KRT28Q7Z3Y7 464 aa24.89■■□□□ 1.57
HOXA11-202ENST00000517402 IL17REQ8NFR9 667 aa24.88■■□□□ 1.57
HOXA11-202ENST00000517402 SEC24BO95487 1268 aa24.88■■□□□ 1.57
HOXA11-202ENST00000517402 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
HOXA11-202ENST00000517402 DDX17Q92841 729 aaKnown RBP24.87■■□□□ 1.57
HOXA11-202ENST00000517402 MST1RQ04912 1400 aa24.87■■□□□ 1.57
HOXA11-202ENST00000517402 HTATSF1O43719 755 aaKnown RBP24.86■■□□□ 1.57
HOXA11-202ENST00000517402 ARHGEF25Q86VW2 580 aa24.86■■□□□ 1.57
HOXA11-202ENST00000517402 USP19O94966 1318 aa24.85■■□□□ 1.57
HOXA11-202ENST00000517402 SLC4A2P04920 1241 aa24.85■■□□□ 1.57
HOXA11-202ENST00000517402 ALS2Q96Q42 1657 aa24.84■■□□□ 1.57
HOXA11-202ENST00000517402 ATF3P18847 181 aa24.83■■□□□ 1.57
HOXA11-202ENST00000517402 SIRT2Q8IXJ6 389 aa24.83■■□□□ 1.57
HOXA11-202ENST00000517402 FAM208AQ9UK61 1670 aaKnown RBP24.82■■□□□ 1.56
HOXA11-202ENST00000517402 RGPD5Q99666 1765 aa24.82■■□□□ 1.56
HOXA11-202ENST00000517402 G2E3Q7L622 706 aa24.82■■□□□ 1.56
HOXA11-202ENST00000517402 AXIN2Q9Y2T1 843 aa24.82■■□□□ 1.56
HOXA11-202ENST00000517402 MED1Q15648 1581 aaPredicted RBP24.81■■□□□ 1.56
HOXA11-202ENST00000517402 CHMP4BQ9H444 224 aaKnown RBP24.81■■□□□ 1.56
HOXA11-202ENST00000517402 INTS3Q68E01 1043 aaKnown RBP24.8■■□□□ 1.56
HOXA11-202ENST00000517402 LNPKQ9C0E8 428 aa24.8■■□□□ 1.56
HOXA11-202ENST00000517402 NUCB1Q02818 461 aa24.8■■□□□ 1.56
HOXA11-202ENST00000517402 NECTIN2Q92692 538 aa24.8■■□□□ 1.56
HOXA11-202ENST00000517402 PTPRCP08575 1304 aa24.8■■□□□ 1.56
HOXA11-202ENST00000517402 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
HOXA11-202ENST00000517402 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
HOXA11-202ENST00000517402 ZC3H6P61129 1189 aaKnown RBP24.78■■□□□ 1.56
HOXA11-202ENST00000517402 PXDNQ92626 1479 aa24.78■■□□□ 1.56
HOXA11-202ENST00000517402 DCCP43146 1447 aa24.78■■□□□ 1.56
HOXA11-202ENST00000517402 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
HOXA11-202ENST00000517402 DDRGK1Q96HY6 314 aa24.77■■□□□ 1.56
HOXA11-202ENST00000517402 LGR6Q9HBX8 967 aa24.77■■□□□ 1.56
HOXA11-202ENST00000517402 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
HOXA11-202ENST00000517402 F6X3S4 739 aa24.77■■□□□ 1.56
HOXA11-202ENST00000517402 SLC4A3P48751 1232 aa24.76■■□□□ 1.55
HOXA11-202ENST00000517402 CHD1LQ86WJ1 897 aa24.76■■□□□ 1.55
HOXA11-202ENST00000517402 LMO7Q8WWI1 1683 aa24.76■■□□□ 1.55
HOXA11-202ENST00000517402 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
HOXA11-202ENST00000517402 CAMTA1Q9Y6Y1 1673 aa24.74■■□□□ 1.55
HOXA11-202ENST00000517402 ZNF530Q6P9A1 599 aaPredicted RBP24.74■■□□□ 1.55
HOXA11-202ENST00000517402 NCAPD2Q15021 1401 aa24.74■■□□□ 1.55
HOXA11-202ENST00000517402 ATP10DQ9P241 1426 aa24.74■■□□□ 1.55
HOXA11-202ENST00000517402 ANKRD45Q5TZF3 282 aa24.74■■□□□ 1.55
HOXA11-202ENST00000517402 MEIS3Q99687 375 aa24.74■■□□□ 1.55
HOXA11-202ENST00000517402 SLC4A10Q6U841 1118 aa24.73■■□□□ 1.55
HOXA11-202ENST00000517402 STK31Q9BXU1 1019 aa24.73■■□□□ 1.55
HOXA11-202ENST00000517402 GCC1Q96CN9 775 aa24.73■■□□□ 1.55
HOXA11-202ENST00000517402 MPRIPQ6WCQ1 1025 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 CABLES1Q8TDN4 633 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 ERBB3P21860 1342 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 KDM3BQ7LBC6 1761 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 NBR1Q14596 966 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 NCOA3Q9Y6Q9 1424 aa24.71■■□□□ 1.55
HOXA11-202ENST00000517402 CCDC30Q5VVM6 783 aa24.7■■□□□ 1.54
HOXA11-202ENST00000517402 FLIIQ13045 1269 aa24.7■■□□□ 1.54
HOXA11-202ENST00000517402 AKAP4Q5JQC9 854 aa24.7■■□□□ 1.54
HOXA11-202ENST00000517402 STRCQ7RTU9 1775 aa24.7■■□□□ 1.54
HOXA11-202ENST00000517402 PLEKHO1Q53GL0 409 aaPredicted RBP24.69■■□□□ 1.54
HOXA11-202ENST00000517402 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
HOXA11-202ENST00000517402 FKBP5Q13451 457 aaPredicted RBP24.68■■□□□ 1.54
HOXA11-202ENST00000517402 NPHP3Q7Z494 1330 aa24.68■■□□□ 1.54
HOXA11-202ENST00000517402 KCNQ3O43525 872 aa24.67■■□□□ 1.54
HOXA11-202ENST00000517402 TNS3Q68CZ2 1445 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms