RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 AMOTQ4VCS5 1084 aa28.78■■■□□ 2.2
EFCAB13-202ENST00000517310 PLEKHO1Q53GL0 409 aaPredicted RBP28.78■■■□□ 2.2
EFCAB13-202ENST00000517310 USP21Q9UK80 565 aa28.78■■■□□ 2.2
EFCAB13-202ENST00000517310 SPATA31A1Q5TZJ5 1347 aa28.77■■■□□ 2.2
EFCAB13-202ENST00000517310 OVOS2A0A0G2JMS6 1433 aa28.76■■■□□ 2.2
EFCAB13-202ENST00000517310 SPATA31A5Q5VU36 1347 aa28.76■■■□□ 2.2
EFCAB13-202ENST00000517310 SPATA31A7Q8IWB4 1347 aa28.76■■■□□ 2.2
EFCAB13-202ENST00000517310 VPS72Q15906 364 aa28.76■■■□□ 2.19
EFCAB13-202ENST00000517310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.76■■■□□ 2.19
EFCAB13-202ENST00000517310 TRIM35Q9UPQ4 493 aa28.76■■■□□ 2.19
EFCAB13-202ENST00000517310 WNK3Q9BYP7 1800 aa28.76■■■□□ 2.19
EFCAB13-202ENST00000517310 PKD1L3Q7Z443 1732 aa28.76■■■□□ 2.19
EFCAB13-202ENST00000517310 AFF2P51816 1311 aa28.75■■■□□ 2.19
EFCAB13-202ENST00000517310 IL2RBP14784 551 aa28.75■■■□□ 2.19
EFCAB13-202ENST00000517310 WWC1Q8IX03 1113 aa28.75■■■□□ 2.19
EFCAB13-202ENST00000517310 USP35Q9P2H5 1018 aa28.75■■■□□ 2.19
EFCAB13-202ENST00000517310 THRAP3Q9Y2W1 955 aaKnown RBP28.75■■■□□ 2.19
EFCAB13-202ENST00000517310 DISP2A7MBM2 1401 aa28.74■■■□□ 2.19
EFCAB13-202ENST00000517310 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
EFCAB13-202ENST00000517310 SPG7Q9UQ90 795 aa28.71■■■□□ 2.19
EFCAB13-202ENST00000517310 PDE3BQ13370 1112 aa28.7■■■□□ 2.18
EFCAB13-202ENST00000517310 CCDC9Q9Y3X0 531 aaKnown RBP28.7■■■□□ 2.18
EFCAB13-202ENST00000517310 ZNF530Q6P9A1 599 aaPredicted RBP28.69■■■□□ 2.18
EFCAB13-202ENST00000517310 MAP3K5Q99683 1374 aa28.69■■■□□ 2.18
EFCAB13-202ENST00000517310 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
EFCAB13-202ENST00000517310 WDR63Q8IWG1 891 aa28.68■■■□□ 2.18
EFCAB13-202ENST00000517310 CDCA7Q9BWT1 371 aaPredicted RBP28.68■■■□□ 2.18
EFCAB13-202ENST00000517310 ATRNO75882 1429 aa28.68■■■□□ 2.18
EFCAB13-202ENST00000517310 GNAT3A8MTJ3 354 aa28.67■■■□□ 2.18
EFCAB13-202ENST00000517310 AKAP4Q5JQC9 854 aa28.67■■■□□ 2.18
EFCAB13-202ENST00000517310 BARGINQ6ZT62 677 aa28.67■■■□□ 2.18
EFCAB13-202ENST00000517310 ZCRB1Q8TBF4 217 aaKnown RBP28.66■■■□□ 2.18
EFCAB13-202ENST00000517310 GOLGA2Q08379 1002 aa28.66■■■□□ 2.18
EFCAB13-202ENST00000517310 SHANK3Q9BYB0 1731 aa28.66■■■□□ 2.18
EFCAB13-202ENST00000517310 TRPC5Q9UL62 973 aaPredicted RBP28.66■■■□□ 2.18
EFCAB13-202ENST00000517310 C1orf141Q5JVX7 400 aa28.65■■■□□ 2.18
EFCAB13-202ENST00000517310 RTF1Q92541 710 aaKnown RBP28.64■■■□□ 2.17
EFCAB13-202ENST00000517310 IL16Q14005 1332 aa28.62■■■□□ 2.17
EFCAB13-202ENST00000517310 PCDH11XQ9BZA7 1347 aa28.62■■■□□ 2.17
EFCAB13-202ENST00000517310 PCDH11YQ9BZA8 1340 aa28.62■■■□□ 2.17
EFCAB13-202ENST00000517310 PHKG2P15735 406 aa28.62■■■□□ 2.17
EFCAB13-202ENST00000517310 IFNL2Q8IZJ0 200 aa28.62■■■□□ 2.17
EFCAB13-202ENST00000517310 GLI3P10071 1580 aa28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 CENPBP07199 599 aaPredicted RBP28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 CALD1Q05682 793 aaKnown RBP28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 DCTN1Q14203 1278 aa28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 CDCA7LQ96GN5 454 aa28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
EFCAB13-202ENST00000517310 CYP27B1O15528 508 aa28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 MCM10Q7L590 875 aa28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 GJD4Q96KN9 370 aaPredicted RBP28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 THUMPD2Q9BTF0 503 aaKnown RBP28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 ADAMTS7Q9UKP4 1686 aa28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 LRRC37A3O60309 1634 aa28.6■■■□□ 2.17
EFCAB13-202ENST00000517310 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
EFCAB13-202ENST00000517310 TNS2Q63HR2 1409 aa28.59■■■□□ 2.17
EFCAB13-202ENST00000517310 E9PSI1 815 aa28.59■■■□□ 2.17
EFCAB13-202ENST00000517310 IL17REQ8NFR9 667 aa28.59■■■□□ 2.17
EFCAB13-202ENST00000517310 SPINK5Q9NQ38 1064 aaPredicted RBP28.59■■■□□ 2.17
EFCAB13-202ENST00000517310 ZNF772Q68DY9 489 aaPredicted RBP28.58■■■□□ 2.17
EFCAB13-202ENST00000517310 QTRT2Q9H974 415 aaKnown RBP28.58■■■□□ 2.17
EFCAB13-202ENST00000517310 CEMIPQ8WUJ3 1361 aa28.57■■■□□ 2.16
EFCAB13-202ENST00000517310 EXOC5O00471 708 aa28.57■■■□□ 2.16
EFCAB13-202ENST00000517310 FAM98CQ17RN3 349 aaKnown RBP28.57■■■□□ 2.16
EFCAB13-202ENST00000517310 SCN11AQ9UI33 1791 aa28.56■■■□□ 2.16
EFCAB13-202ENST00000517310 HSP90AB1P08238 724 aaKnown RBP28.56■■■□□ 2.16
EFCAB13-202ENST00000517310 TRMT2AQ8IZ69 625 aaKnown RBP28.56■■■□□ 2.16
EFCAB13-202ENST00000517310 THSD7AQ9UPZ6 1657 aa28.56■■■□□ 2.16
EFCAB13-202ENST00000517310 RNMTO43148 476 aaKnown RBP28.55■■■□□ 2.16
EFCAB13-202ENST00000517310 MPRIPQ6WCQ1 1025 aa28.55■■■□□ 2.16
EFCAB13-202ENST00000517310 DDB1Q16531 1140 aa28.54■■■□□ 2.16
EFCAB13-202ENST00000517310 LGR6Q9HBX8 967 aa28.54■■■□□ 2.16
EFCAB13-202ENST00000517310 NKX1-1Q15270 411 aaPredicted RBP28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 IFT57Q9NWB7 429 aa28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 KDM6AO15550 1401 aaPredicted RBP28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 DUSP27Q5VZP5 1158 aa28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 DDX54Q8TDD1 881 aaKnown RBP28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 DCAF5Q96JK2 942 aa28.53■■■□□ 2.16
EFCAB13-202ENST00000517310 ZNF853P0CG23 659 aa28.52■■■□□ 2.16
EFCAB13-202ENST00000517310 GNAI1P63096 354 aa28.52■■■□□ 2.16
EFCAB13-202ENST00000517310 CFAP44Q96MT7 982 aa28.52■■■□□ 2.16
EFCAB13-202ENST00000517310 MYH16Q9H6N6 1097 aa28.52■■■□□ 2.16
EFCAB13-202ENST00000517310 ONECUT3O60422 494 aaPredicted RBP28.51■■■□□ 2.15
EFCAB13-202ENST00000517310 SIPA1L3O60292 1781 aaPredicted RBP28.48■■■□□ 2.15
EFCAB13-202ENST00000517310 ILDR1Q86SU0 546 aaPredicted RBP28.47■■■□□ 2.15
EFCAB13-202ENST00000517310 LAS1LQ9Y4W2 734 aaKnown RBP28.47■■■□□ 2.15
EFCAB13-202ENST00000517310 MRC1P22897 1456 aa28.47■■■□□ 2.15
EFCAB13-202ENST00000517310 CHL1O00533 1208 aa28.46■■■□□ 2.15
EFCAB13-202ENST00000517310 FANCIQ9NVI1 1328 aa28.46■■■□□ 2.15
EFCAB13-202ENST00000517310 TEFQ10587 303 aa28.46■■■□□ 2.15
EFCAB13-202ENST00000517310 TAF7Q15545 349 aaPredicted RBP28.46■■■□□ 2.15
EFCAB13-202ENST00000517310 BABAM1Q9NWV8 329 aa28.46■■■□□ 2.15
EFCAB13-202ENST00000517310 TSR2Q969E8 191 aaKnown RBP28.45■■■□□ 2.14
EFCAB13-202ENST00000517310 RBM6P78332 1123 aaKnown RBP28.44■■■□□ 2.14
EFCAB13-202ENST00000517310 MBIPQ9NS73 344 aa28.44■■■□□ 2.14
EFCAB13-202ENST00000517310 TOGARAM1Q9Y4F4 1720 aa28.44■■■□□ 2.14
EFCAB13-202ENST00000517310 A0A0G2JS52 829 aa28.43■■■□□ 2.14
EFCAB13-202ENST00000517310 MYT1Q01538 1121 aa28.43■■■□□ 2.14
EFCAB13-202ENST00000517310 MARCH10Q8NA82 808 aaPredicted RBP28.43■■■□□ 2.14
EFCAB13-202ENST00000517310 SLC52A2Q9HAB3 445 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms