RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 KLF16Q9BXK1 252 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ACIN1Q9UKV3 1341 aaKnown RBP8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L15C9J2P7 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L13C9JLJ4 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L12C9JPN9 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L11C9JVI0 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L21D6R901 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L18D6R9N7 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L22D6RA61 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L17D6RBQ6 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L19D6RCP7 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L20D6RJB6 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ADD1P35611 737 aaKnown RBP8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 USP17L24Q0WX57 530 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 RETREG2Q8NC44 543 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 PCDHGA11Q9Y5H2 935 aa8.89□□□□□ -0.99
RNU6-1028P-201ENST00000517164 FAM196BA6NMK8 535 aa8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ZIC2O95409 532 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 TIMP2P16035 220 aa8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 PTK7Q13308 1070 aa8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 LARP1Q6PKG0 1096 aaKnown RBP8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ZNF594Q96JF6 807 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ATP1A2P50993 1020 aa8.87□□□□□ -0.99
RNU6-1028P-201ENST00000517164 CBLBQ13191 982 aa8.87□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
RNU6-1028P-201ENST00000517164 DNAAF2Q9NVR5 837 aaKnown RBP8.87□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1028P-201ENST00000517164 PSME1Q06323 249 aa8.86□□□□□ -0.99
RNU6-1028P-201ENST00000517164 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
RNU6-1028P-201ENST00000517164 FAM187AA6NFU0 413 aa8.85□□□□□ -0.99
RNU6-1028P-201ENST00000517164 STAU1O95793 577 aaKnown RBP8.85□□□□□ -0.99
RNU6-1028P-201ENST00000517164 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
RNU6-1028P-201ENST00000517164 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
RNU6-1028P-201ENST00000517164 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
RNU6-1028P-201ENST00000517164 DKK1O94907 266 aa8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ELOAQ14241 798 aaKnown RBP8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 ANKMY2Q8IV38 441 aa8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 SIX5Q8N196 739 aa8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 TPCN2Q8NHX9 752 aa8.84□□□□□ -0.99
RNU6-1028P-201ENST00000517164 CARNS1A5YM72 827 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 GFRA3O60609 400 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 CSB-PGBD3P0DP91 1061 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 DPYDQ12882 1025 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 Q6ZVU0 165 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
RNU6-1028P-201ENST00000517164 ADH1AP07327 375 aa8.82□□□□□ -1
RNU6-1028P-201ENST00000517164 SCNN1DP51172 638 aa8.82□□□□□ -1
RNU6-1028P-201ENST00000517164 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
RNU6-1028P-201ENST00000517164 KDF1Q8NAX2 398 aaPredicted RBP8.82□□□□□ -1
RNU6-1028P-201ENST00000517164 TMEM88BA6NKF7 163 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 SFI1A8K8P3 1242 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 NRG2O14511 850 aaPredicted RBP8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 CAPN5O15484 640 aaPredicted RBP8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 MEIOBQ8N635 442 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 FAM200AQ8TCP9 573 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 ETNK1Q9HBU6 452 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
RNU6-1028P-201ENST00000517164 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
RNU6-1028P-201ENST00000517164 AVPP01185 164 aa8.8□□□□□ -1
RNU6-1028P-201ENST00000517164 GDF10P55107 478 aa8.8□□□□□ -1
RNU6-1028P-201ENST00000517164 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
RNU6-1028P-201ENST00000517164 GNRH1P01148 92 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 SEC13P55735 322 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 RELBQ01201 579 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 PKDCCQ504Y2 493 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 ZNF358Q9NW07 568 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 USTQ9Y2C2 406 aa8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
RNU6-1028P-201ENST00000517164 PTGIRP43119 386 aa8.78□□□□□ -1
RNU6-1028P-201ENST00000517164 A0A1W2PRU2 124 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 DGAT1O75907 488 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 IL2RAP01589 272 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 INHAP05111 366 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 SERTAD1Q9UHV2 236 aa8.77□□□□□ -1.01
RNU6-1028P-201ENST00000517164 LGR5O75473 907 aa8.76□□□□□ -1.01
RNU6-1028P-201ENST00000517164 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
RNU6-1028P-201ENST00000517164 PDIA4P13667 645 aaKnown RBP8.75□□□□□ -1.01
RNU6-1028P-201ENST00000517164 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
RNU6-1028P-201ENST00000517164 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
RNU6-1028P-201ENST00000517164 CNKSR1Q969H4 720 aa8.75□□□□□ -1.01
RNU6-1028P-201ENST00000517164 SLAIN2Q9P270 581 aa8.75□□□□□ -1.01
RNU6-1028P-201ENST00000517164 MEN1O00255 615 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 BMP1P13497 986 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 CLN3Q13286 438 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 LAPTM4AQ15012 233 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 SWI5Q1ZZU3 235 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms