RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 RGPD1P0DJD0 1748 aa6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 MTHFSP49914 203 aa6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 CNGB1Q14028 1251 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 EIF4A2Q14240 407 aaKnown RBP6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 IFNL2Q8IZJ0 200 aa6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 SMARCC1Q92922 1105 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP260-201ENST00000516907 IGSF1Q8N6C5 1336 aa6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 PLSCR1O15162 318 aa6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 MARCH10Q8NA82 808 aaPredicted RBP6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 EYA1Q99502 592 aa6.83□□□□□ -1.32
RN7SKP260-201ENST00000516907 FBLN1P23142 703 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 SLC27A3Q5K4L6 730 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 SULT6B1Q6IMI4 303 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 GAS2L2Q8NHY3 880 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 DCAF5Q96JK2 942 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 TMOD3Q9NYL9 352 aa6.82□□□□□ -1.32
RN7SKP260-201ENST00000516907 MEGF6O75095 1541 aa6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 ZNF316A6NFI3 1004 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 EN1Q05925 392 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 DDX10Q13206 875 aaKnown RBP6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 ZNF530Q6P9A1 599 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 ACSBG1Q96GR2 724 aa6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 NCAPD2Q15021 1401 aa6.81□□□□□ -1.32
RN7SKP260-201ENST00000516907 WNK3Q9BYP7 1800 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 MYBBP1AQ9BQG0 1328 aaKnown RBP6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 MAPK8IP3Q9UPT6 1336 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 ERVV-2B6SEH9 535 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 PPP2R1AP30153 589 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 IL13P35225 146 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 CABP4P57796 275 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 WDR43Q15061 677 aaKnown RBP eCLIP6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 AKAP4Q5JQC9 854 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 DEFB132Q7Z7B7 95 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 RTF1Q92541 710 aaKnown RBP6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 KDRP35968 1356 aa6.8□□□□□ -1.32
RN7SKP260-201ENST00000516907 PEAK1Q9H792 1746 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 BRWD3Q6RI45 1802 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 ANP32CO43423 234 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 FCHSD2O94868 740 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 PHKG2P15735 406 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 PRIM1P49642 420 aaKnown RBP6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 NKX1-1Q15270 411 aaPredicted RBP6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 EZH2Q15910 746 aaKnown RBP6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 CAMKK2Q96RR4 588 aa6.79□□□□□ -1.32
RN7SKP260-201ENST00000516907 RGPD3A6NKT7 1758 aaPredicted RBP6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 RGPD4Q7Z3J3 1758 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 DCAF8L1A6NGE4 600 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 LMOD3Q0VAK6 560 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 TEFQ10587 303 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 TXNRD1Q16881 649 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 MPRIPQ6WCQ1 1025 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 NPM2Q86SE8 214 aaKnown RBP6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 TTC5Q8N0Z6 440 aa6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 CCNL1Q9UK58 526 aaPredicted RBP6.78□□□□□ -1.32
RN7SKP260-201ENST00000516907 NHSQ6T4R5 1651 aa6.77□□□□□ -1.32
RN7SKP260-201ENST00000516907 RGPD5Q99666 1765 aa6.77□□□□□ -1.33
RN7SKP260-201ENST00000516907 CYP27B1O15528 508 aa6.77□□□□□ -1.33
RN7SKP260-201ENST00000516907 HMOX1P09601 288 aa6.77□□□□□ -1.33
RN7SKP260-201ENST00000516907 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.33
RN7SKP260-201ENST00000516907 PALLDQ8WX93 1383 aa6.77□□□□□ -1.33
RN7SKP260-201ENST00000516907 MAP2P11137 1827 aaKnown RBP6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 KCNQ2O43526 872 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 HTATSF1O43719 755 aaKnown RBP6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 R3HDM1Q15032 1099 aaKnown RBP6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 AK7Q96M32 723 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 TFCP2L1Q9NZI6 479 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 MAP3K5Q99683 1374 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 PKD1L3Q7Z443 1732 aa6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 TNS1Q9HBL0 1735 aaKnown RBP6.76□□□□□ -1.33
RN7SKP260-201ENST00000516907 POLD1P28340 1107 aa6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 AEBP1Q8IUX7 1158 aa6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 SLC16A10Q8TF71 515 aa6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 SPON1Q9HCB6 807 aa6.75□□□□□ -1.33
RN7SKP260-201ENST00000516907 MSH5O43196 834 aa6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 ATP6V1AP38606 617 aa6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 PIGBQ92521 554 aa6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 RBM42Q9BTD8 480 aaKnown RBP6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 TEX13AQ9BXU3 409 aaPredicted RBP6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 PRKRIP1Q9H875 184 aaPredicted RBP6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
RN7SKP260-201ENST00000516907 COL3A1P02461 1466 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP260-201ENST00000516907 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
RN7SKP260-201ENST00000516907 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP260-201ENST00000516907 STARD3NLO95772 234 aa6.73□□□□□ -1.33
RN7SKP260-201ENST00000516907 ADRA2BP18089 450 aa6.73□□□□□ -1.33
RN7SKP260-201ENST00000516907 SIK1P57059 783 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms