RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
RN7SKP135-201ENST00000516549 FBLN1P23142 703 aa14.87□□□□□ -0.03
RN7SKP135-201ENST00000516549 FAM182BQ5T319 152 aa14.87□□□□□ -0.03
RN7SKP135-201ENST00000516549 EP400Q96L91 3159 aa14.87□□□□□ -0.03
RN7SKP135-201ENST00000516549 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
RN7SKP135-201ENST00000516549 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
RN7SKP135-201ENST00000516549 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
RN7SKP135-201ENST00000516549 TRIM37O94972 964 aa14.84□□□□□ -0.03
RN7SKP135-201ENST00000516549 MORC1Q86VD1 984 aa14.84□□□□□ -0.03
RN7SKP135-201ENST00000516549 SBF2Q86WG5 1849 aa14.84□□□□□ -0.03
RN7SKP135-201ENST00000516549 BCL9O00512 1426 aa14.83□□□□□ -0.03
RN7SKP135-201ENST00000516549 HSP90AB2PQ58FF8 381 aa14.83□□□□□ -0.04
RN7SKP135-201ENST00000516549 DEFB132Q7Z7B7 95 aa14.83□□□□□ -0.04
RN7SKP135-201ENST00000516549 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
RN7SKP135-201ENST00000516549 PARD3Q8TEW0 1356 aa14.83□□□□□ -0.04
RN7SKP135-201ENST00000516549 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
RN7SKP135-201ENST00000516549 APBA3O96018 575 aa14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 MARCH10Q8NA82 808 aaPredicted RBP14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 POLKQ9UBT6 870 aa14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 KAT6BQ8WYB5 2073 aa14.81□□□□□ -0.04
RN7SKP135-201ENST00000516549 RGPD3A6NKT7 1758 aaPredicted RBP14.8□□□□□ -0.04
RN7SKP135-201ENST00000516549 RGPD4Q7Z3J3 1758 aa14.8□□□□□ -0.04
RN7SKP135-201ENST00000516549 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
RN7SKP135-201ENST00000516549 NBPF6Q5VWK0 638 aa14.79□□□□□ -0.04
RN7SKP135-201ENST00000516549 NBPF4Q96M43 638 aa14.79□□□□□ -0.04
RN7SKP135-201ENST00000516549 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
RN7SKP135-201ENST00000516549 TATP17735 454 aaPredicted RBP14.78□□□□□ -0.04
RN7SKP135-201ENST00000516549 EN1Q05925 392 aaPredicted RBP14.78□□□□□ -0.04
RN7SKP135-201ENST00000516549 BCL11BQ9C0K0 894 aaPredicted RBP14.78□□□□□ -0.04
RN7SKP135-201ENST00000516549 NHSQ6T4R5 1651 aa14.77□□□□□ -0.04
RN7SKP135-201ENST00000516549 ZCRB1Q8TBF4 217 aaKnown RBP14.77□□□□□ -0.05
RN7SKP135-201ENST00000516549 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
RN7SKP135-201ENST00000516549 MEGF6O75095 1541 aa14.76□□□□□ -0.05
RN7SKP135-201ENST00000516549 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
RN7SKP135-201ENST00000516549 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
RN7SKP135-201ENST00000516549 RREB1Q92766 1687 aa14.75□□□□□ -0.05
RN7SKP135-201ENST00000516549 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
RN7SKP135-201ENST00000516549 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
RN7SKP135-201ENST00000516549 SHANK3Q9BYB0 1731 aa14.75□□□□□ -0.05
RN7SKP135-201ENST00000516549 NCAPD2Q15021 1401 aa14.75□□□□□ -0.05
RN7SKP135-201ENST00000516549 PLEKHG2Q9H7P9 1386 aa14.74□□□□□ -0.05
RN7SKP135-201ENST00000516549 PLSCR1O15162 318 aa14.74□□□□□ -0.05
RN7SKP135-201ENST00000516549 ZEB1P37275 1124 aaPredicted RBP14.74□□□□□ -0.05
RN7SKP135-201ENST00000516549 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
RN7SKP135-201ENST00000516549 PCDH11XQ9BZA7 1347 aa14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 PCDH11YQ9BZA8 1340 aa14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 PKD1L3Q7Z443 1732 aa14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 EVX2Q03828 476 aa14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 CC2D1BQ5T0F9 858 aaKnown RBP14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 EYA1Q99502 592 aa14.73□□□□□ -0.05
RN7SKP135-201ENST00000516549 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
RN7SKP135-201ENST00000516549 NUP188Q5SRE5 1749 aa14.72□□□□□ -0.05
RN7SKP135-201ENST00000516549 DOT1LQ8TEK3 1739 aa14.72□□□□□ -0.05
RN7SKP135-201ENST00000516549 BTAF1O14981 1849 aa14.71□□□□□ -0.05
RN7SKP135-201ENST00000516549 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.05
RN7SKP135-201ENST00000516549 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
RN7SKP135-201ENST00000516549 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
RN7SKP135-201ENST00000516549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.06
RN7SKP135-201ENST00000516549 MTHFSP49914 203 aa14.69□□□□□ -0.06
RN7SKP135-201ENST00000516549 KCNQ2O43526 872 aa14.68□□□□□ -0.06
RN7SKP135-201ENST00000516549 SYTL4Q96C24 671 aaPredicted RBP14.67□□□□□ -0.06
RN7SKP135-201ENST00000516549 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP135-201ENST00000516549 PTF1AQ7RTS3 328 aa14.66□□□□□ -0.06
RN7SKP135-201ENST00000516549 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 IL13P35225 146 aa14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 PRIM1P49642 420 aaKnown RBP14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 PLEKHO1Q53GL0 409 aaPredicted RBP14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 CFAP53Q96M91 514 aa14.65□□□□□ -0.06
RN7SKP135-201ENST00000516549 PSDA5PKW4 1024 aaPredicted RBP14.64□□□□□ -0.07
RN7SKP135-201ENST00000516549 CYP27B1O15528 508 aa14.64□□□□□ -0.07
RN7SKP135-201ENST00000516549 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
RN7SKP135-201ENST00000516549 R3HDM1Q15032 1099 aaKnown RBP14.64□□□□□ -0.07
RN7SKP135-201ENST00000516549 KDRP35968 1356 aa14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 SLC27A3Q5K4L6 730 aa14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 ITGB4P16144 1822 aa14.63□□□□□ -0.07
RN7SKP135-201ENST00000516549 LY75O60449 1722 aa14.61□□□□□ -0.07
RN7SKP135-201ENST00000516549 PHKG2P15735 406 aa14.61□□□□□ -0.07
RN7SKP135-201ENST00000516549 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
RN7SKP135-201ENST00000516549 STK32BQ9NY57 414 aa14.61□□□□□ -0.07
RN7SKP135-201ENST00000516549 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
RN7SKP135-201ENST00000516549 LRP5O75197 1615 aa14.6□□□□□ -0.07
RN7SKP135-201ENST00000516549 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
RN7SKP135-201ENST00000516549 PROM2Q8N271 834 aa14.6□□□□□ -0.07
RN7SKP135-201ENST00000516549 NUDCQ9Y266 331 aa14.6□□□□□ -0.07
RN7SKP135-201ENST00000516549 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
RN7SKP135-201ENST00000516549 MPRIPQ6WCQ1 1025 aa14.59□□□□□ -0.07
RN7SKP135-201ENST00000516549 AEBP1Q8IUX7 1158 aa14.59□□□□□ -0.07
RN7SKP135-201ENST00000516549 SMARCC1Q92922 1105 aaPredicted RBP14.59□□□□□ -0.07
RN7SKP135-201ENST00000516549 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
RN7SKP135-201ENST00000516549 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
RN7SKP135-201ENST00000516549 DCAF5Q96JK2 942 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms