RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ERVK-9P63128 1117 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 CCDC102BQ68D86 513 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 PPP1R18Q6NYC8 613 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 TAS1R3Q7RTX0 852 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 SPNS2Q8IVW8 549 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 RGS22Q8NE09 1264 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 MTMR7Q9Y216 660 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 IVNS1ABPQ9Y6Y0 642 aa5.8□□□□□ -1.48
RNU6-390P-201ENST00000516259 SIAH2O43255 324 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 ERCC3P19447 782 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 MFAP1P55081 439 aaKnown RBP5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 NR5A1Q13285 461 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 OXLD1Q5BKU9 147 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 INTS6LQ5JSJ4 861 aaKnown RBP5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 PLA2G2CQ5R387 149 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 EGFL7Q9UHF1 273 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 AMOTL2Q9Y2J4 779 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 PCDHB11Q9Y5F2 797 aa5.79□□□□□ -1.48
RNU6-390P-201ENST00000516259 WNT7AO00755 349 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 PPEF1O14829 653 aaPredicted RBP5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 ATP2B4P23634 1241 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 OCLNQ16625 522 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 RC3H1Q5TC82 1133 aaKnown RBP5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 CC2D2BQ6DHV5 1058 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 VASH1Q7L8A9 365 aaPredicted RBP5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 COL26A1Q96A83 441 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 SLAIN2Q9P270 581 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 KIAA1024Q9UPX6 916 aa5.78□□□□□ -1.48
RNU6-390P-201ENST00000516259 CARNS1A5YM72 827 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 ERVH48-1M5A8F1 160 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 WEE1P30291 646 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 GRM5P41594 1212 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 EHBP1Q8NDI1 1231 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 CXXC1Q9P0U4 656 aaPredicted RBP5.77□□□□□ -1.49
RNU6-390P-201ENST00000516259 BACH1O14867 736 aa5.76□□□□□ -1.49
RNU6-390P-201ENST00000516259 ADH1CP00326 375 aa5.76□□□□□ -1.49
RNU6-390P-201ENST00000516259 CCDC27Q2M243 656 aa5.76□□□□□ -1.49
RNU6-390P-201ENST00000516259 TPCN2Q8NHX9 752 aa5.76□□□□□ -1.49
RNU6-390P-201ENST00000516259 ZNF594Q96JF6 807 aaPredicted RBP5.76□□□□□ -1.49
RNU6-390P-201ENST00000516259 GNRH1P01148 92 aa5.75□□□□□ -1.49
RNU6-390P-201ENST00000516259 NPM2Q86SE8 214 aaKnown RBP5.75□□□□□ -1.49
RNU6-390P-201ENST00000516259 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
RNU6-390P-201ENST00000516259 SLC4A9Q96Q91 983 aa5.75□□□□□ -1.49
RNU6-390P-201ENST00000516259 FOXO3O43524 673 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 PTCD1O75127 700 aaKnown RBP5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 IGFBP4P22692 258 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 MYT1Q01538 1121 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 LIAT1Q6ZQX7 453 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 CYP2U1Q7Z449 544 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 CCDC116Q8IYX3 515 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 OSBPL3Q9H4L5 887 aa5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 ESF1Q9H501 851 aaKnown RBP5.74□□□□□ -1.49
RNU6-390P-201ENST00000516259 SOWAHDA6NJG2 315 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 TMEM229AB2RXF0 380 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 LILRA1O75019 489 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 SLC19A1P41440 591 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 RANGAP1P46060 587 aaPredicted RBP5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 PSME1Q06323 249 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 ESCO1Q5FWF5 840 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 EMID1Q96A84 441 aaPredicted RBP5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 PGPEP1Q9NXJ5 209 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 EMILIN1Q9Y6C2 1016 aa5.73□□□□□ -1.49
RNU6-390P-201ENST00000516259 SFI1A8K8P3 1242 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 INHAP05111 366 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 FSHRP23945 695 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 SCTRP47872 440 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 SCNN1DP51172 638 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 EPHA4P54764 986 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 MTFR1Q15390 333 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 SPRYD7Q5W111 196 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 POTEAQ6S8J7 498 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 ZNF358Q9NW07 568 aa5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 V9GY48 417 aaPredicted RBP5.72□□□□□ -1.49
RNU6-390P-201ENST00000516259 GDF10P55107 478 aa5.71□□□□□ -1.5
RNU6-390P-201ENST00000516259 SF3B2Q13435 895 aaKnown RBP5.71□□□□□ -1.5
RNU6-390P-201ENST00000516259 PPP1R26Q5T8A7 1209 aaPredicted RBP5.71□□□□□ -1.5
RNU6-390P-201ENST00000516259 ZNF598Q86UK7 904 aaKnown RBP5.71□□□□□ -1.5
RNU6-390P-201ENST00000516259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNU6-390P-201ENST00000516259 NPR3P17342 541 aa5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 FOXK2Q01167 660 aa5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 ZNF784Q8NCA9 323 aaPredicted RBP5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 XAGE2Q96GT9 111 aa5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 MRGPRX2Q96LB1 330 aa5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 HINFPQ9BQA5 517 aa5.7□□□□□ -1.5
RNU6-390P-201ENST00000516259 PRMT3O60678 531 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 ICMTO60725 284 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 MMRN1Q13201 1228 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 ARID5BQ14865 1188 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 Q6ZVU0 165 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 TSEN2Q8NCE0 465 aaKnown RBP5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 SNIP1Q8TAD8 396 aaKnown RBP5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 HRH3Q9Y5N1 445 aa5.69□□□□□ -1.5
RNU6-390P-201ENST00000516259 A0A0G2JS52 829 aa5.68□□□□□ -1.5
RNU6-390P-201ENST00000516259 CDK2AP1O14519 115 aa5.68□□□□□ -1.5
RNU6-390P-201ENST00000516259 C21orf2O43822 256 aa5.68□□□□□ -1.5
RNU6-390P-201ENST00000516259 HIRAP54198 1017 aaPredicted RBP5.68□□□□□ -1.5
RNU6-390P-201ENST00000516259 FKBP4Q02790 459 aaKnown RBP eCLIP5.68□□□□□ -1.5
RNU6-390P-201ENST00000516259 COL19A1Q14993 1142 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms