RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, human

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-213	ENST00000515859	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
TUSC3-213	ENST00000515859	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.54	■■■□□ 2.8
TUSC3-213	ENST00000515859	MEX3C	Q5U5Q3	659 aa	Known RBP	32.52	■■■□□ 2.8
TUSC3-213	ENST00000515859	HTATSF1	O43719	755 aa	Known RBP	32.51	■■■□□ 2.8
TUSC3-213	ENST00000515859	UNC5CL	Q8IV45	518 aa		32.51	■■■□□ 2.8
TUSC3-213	ENST00000515859	CALD1	Q05682	793 aa	Known RBP	32.51	■■■□□ 2.79
TUSC3-213	ENST00000515859	NRAP	Q86VF7	1730 aa		32.51	■■■□□ 2.79
TUSC3-213	ENST00000515859	MEGF6	O75095	1541 aa		32.49	■■■□□ 2.79
TUSC3-213	ENST00000515859		E9PSI1	815 aa		32.49	■■■□□ 2.79
TUSC3-213	ENST00000515859	IL2RB	P14784	551 aa		32.49	■■■□□ 2.79
TUSC3-213	ENST00000515859	CDCA7L	Q96GN5	454 aa		32.49	■■■□□ 2.79
TUSC3-213	ENST00000515859	SPG7	Q9UQ90	795 aa		32.49	■■■□□ 2.79
TUSC3-213	ENST00000515859	GNAT3	A8MTJ3	354 aa		32.48	■■■□□ 2.79
TUSC3-213	ENST00000515859	RTF1	Q92541	710 aa	Known RBP	32.48	■■■□□ 2.79
TUSC3-213	ENST00000515859	IL16	Q14005	1332 aa		32.48	■■■□□ 2.79
TUSC3-213	ENST00000515859	SLFN5	Q08AF3	891 aa		32.47	■■■□□ 2.79
TUSC3-213	ENST00000515859	THRAP3	Q9Y2W1	955 aa	Known RBP	32.47	■■■□□ 2.79
TUSC3-213	ENST00000515859	DLG5	Q8TDM6	1919 aa		32.46	■■■□□ 2.79
TUSC3-213	ENST00000515859	OVOS2	A0A0G2JMS6	1433 aa		32.46	■■■□□ 2.79
TUSC3-213	ENST00000515859	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.46	■■■□□ 2.79
TUSC3-213	ENST00000515859	USP35	Q9P2H5	1018 aa		32.46	■■■□□ 2.79
TUSC3-213	ENST00000515859	MAP3K5	Q99683	1374 aa		32.46	■■■□□ 2.79
TUSC3-213	ENST00000515859	BCL9L	Q86UU0	1499 aa		32.45	■■■□□ 2.79
TUSC3-213	ENST00000515859	AKAP4	Q5JQC9	854 aa		32.45	■■■□□ 2.79
TUSC3-213	ENST00000515859	SPATA31A1	Q5TZJ5	1347 aa		32.44	■■■□□ 2.78
TUSC3-213	ENST00000515859	C1orf141	Q5JVX7	400 aa		32.44	■■■□□ 2.78
TUSC3-213	ENST00000515859	TRMT2A	Q8IZ69	625 aa	Known RBP	32.44	■■■□□ 2.78
TUSC3-213	ENST00000515859	USP21	Q9UK80	565 aa		32.43	■■■□□ 2.78
TUSC3-213	ENST00000515859	SPATA31A5	Q5VU36	1347 aa		32.43	■■■□□ 2.78
TUSC3-213	ENST00000515859	SPATA31A7	Q8IWB4	1347 aa		32.43	■■■□□ 2.78
TUSC3-213	ENST00000515859	PARP4	Q9UKK3	1724 aa	Known RBP	32.42	■■■□□ 2.78
TUSC3-213	ENST00000515859	VPS72	Q15906	364 aa		32.41	■■■□□ 2.78
TUSC3-213	ENST00000515859	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.41	■■■□□ 2.78
TUSC3-213	ENST00000515859	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.4	■■■□□ 2.78
TUSC3-213	ENST00000515859	DUSP27	Q5VZP5	1158 aa		32.4	■■■□□ 2.78
TUSC3-213	ENST00000515859	ZCRB1	Q8TBF4	217 aa	Known RBP	32.4	■■■□□ 2.78
TUSC3-213	ENST00000515859	MYH16	Q9H6N6	1097 aa		32.4	■■■□□ 2.78
TUSC3-213	ENST00000515859	DCTN1	Q14203	1278 aa		32.39	■■■□□ 2.78
TUSC3-213	ENST00000515859	MCM10	Q7L590	875 aa		32.39	■■■□□ 2.78
TUSC3-213	ENST00000515859	IFNL2	Q8IZJ0	200 aa		32.38	■■■□□ 2.77
TUSC3-213	ENST00000515859	THUMPD2	Q9BTF0	503 aa	Known RBP	32.38	■■■□□ 2.77
TUSC3-213	ENST00000515859	CCDC9	Q9Y3X0	531 aa	Known RBP	32.38	■■■□□ 2.77
TUSC3-213	ENST00000515859	PKD1L3	Q7Z443	1732 aa		32.38	■■■□□ 2.77
TUSC3-213	ENST00000515859	DISP2	A7MBM2	1401 aa		32.38	■■■□□ 2.77
TUSC3-213	ENST00000515859	IFT57	Q9NWB7	429 aa		32.37	■■■□□ 2.77
TUSC3-213	ENST00000515859	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.36	■■■□□ 2.77
TUSC3-213	ENST00000515859	AFF2	P51816	1311 aa		32.36	■■■□□ 2.77
TUSC3-213	ENST00000515859	GNAI1	P63096	354 aa		32.36	■■■□□ 2.77
TUSC3-213	ENST00000515859	BARGIN	Q6ZT62	677 aa		32.36	■■■□□ 2.77
TUSC3-213	ENST00000515859	PCDH11X	Q9BZA7	1347 aa		32.35	■■■□□ 2.77
TUSC3-213	ENST00000515859	PCDH11Y	Q9BZA8	1340 aa		32.35	■■■□□ 2.77
TUSC3-213	ENST00000515859	PHKG2	P15735	406 aa		32.35	■■■□□ 2.77
TUSC3-213	ENST00000515859	IL17RE	Q8NFR9	667 aa		32.34	■■■□□ 2.77
TUSC3-213	ENST00000515859	CFAP44	Q96MT7	982 aa		32.34	■■■□□ 2.77
TUSC3-213	ENST00000515859	HSP90AB1	P08238	724 aa	Known RBP	32.33	■■■□□ 2.77
TUSC3-213	ENST00000515859	CEMIP	Q8WUJ3	1361 aa		32.33	■■■□□ 2.77
TUSC3-213	ENST00000515859	CYP27B1	O15528	508 aa		32.32	■■■□□ 2.76
TUSC3-213	ENST00000515859	ZNF853	P0CG23	659 aa		32.32	■■■□□ 2.76
TUSC3-213	ENST00000515859	RNMT	O43148	476 aa	Known RBP	32.29	■■■□□ 2.76
TUSC3-213	ENST00000515859	MPRIP	Q6WCQ1	1025 aa		32.29	■■■□□ 2.76
TUSC3-213	ENST00000515859	EXOC5	O00471	708 aa		32.29	■■■□□ 2.76
TUSC3-213	ENST00000515859	LAS1L	Q9Y4W2	734 aa	Known RBP	32.29	■■■□□ 2.76
TUSC3-213	ENST00000515859	FANCI	Q9NVI1	1328 aa		32.28	■■■□□ 2.76
TUSC3-213	ENST00000515859	DCAF5	Q96JK2	942 aa		32.28	■■■□□ 2.76
TUSC3-213	ENST00000515859	LGR6	Q9HBX8	967 aa		32.28	■■■□□ 2.76
TUSC3-213	ENST00000515859	TRPC5	Q9UL62	973 aa	Predicted RBP	32.28	■■■□□ 2.76
TUSC3-213	ENST00000515859	BABAM1	Q9NWV8	329 aa		32.27	■■■□□ 2.76
TUSC3-213	ENST00000515859	CHL1	O00533	1208 aa		32.26	■■■□□ 2.76
TUSC3-213	ENST00000515859	WNK3	Q9BYP7	1800 aa		32.26	■■■□□ 2.75
TUSC3-213	ENST00000515859	NKX1-1	Q15270	411 aa	Predicted RBP	32.26	■■■□□ 2.75
TUSC3-213	ENST00000515859	LRRC37A3	O60309	1634 aa		32.25	■■■□□ 2.75
TUSC3-213	ENST00000515859	TAF7	Q15545	349 aa	Predicted RBP	32.25	■■■□□ 2.75
TUSC3-213	ENST00000515859	TSR2	Q969E8	191 aa	Known RBP	32.25	■■■□□ 2.75
TUSC3-213	ENST00000515859	ATRN	O75882	1429 aa		32.24	■■■□□ 2.75
TUSC3-213	ENST00000515859	TEF	Q10587	303 aa		32.24	■■■□□ 2.75
TUSC3-213	ENST00000515859	DDX54	Q8TDD1	881 aa	Known RBP	32.24	■■■□□ 2.75
TUSC3-213	ENST00000515859	GJD4	Q96KN9	370 aa	Predicted RBP	32.24	■■■□□ 2.75
TUSC3-213	ENST00000515859	MBIP	Q9NS73	344 aa		32.23	■■■□□ 2.75
TUSC3-213	ENST00000515859	ADAMTS7	Q9UKP4	1686 aa		32.23	■■■□□ 2.75
TUSC3-213	ENST00000515859	DDB1	Q16531	1140 aa		32.22	■■■□□ 2.75
TUSC3-213	ENST00000515859	TNS2	Q63HR2	1409 aa		32.22	■■■□□ 2.75
TUSC3-213	ENST00000515859	KDM6A	O15550	1401 aa	Predicted RBP	32.21	■■■□□ 2.75
TUSC3-213	ENST00000515859	FAM98C	Q17RN3	349 aa	Known RBP	32.21	■■■□□ 2.75
TUSC3-213	ENST00000515859	CT47B1	P0C2W7	299 aa	Predicted RBP	32.2	■■■□□ 2.75
TUSC3-213	ENST00000515859	SHANK3	Q9BYB0	1731 aa		32.2	■■■□□ 2.74
TUSC3-213	ENST00000515859	QTRT2	Q9H974	415 aa	Known RBP	32.19	■■■□□ 2.74
TUSC3-213	ENST00000515859	TSPYL4	Q9UJ04	414 aa		32.19	■■■□□ 2.74
TUSC3-213	ENST00000515859	ZNF772	Q68DY9	489 aa	Predicted RBP	32.18	■■■□□ 2.74
TUSC3-213	ENST00000515859	RCAN3	Q9UKA8	241 aa		32.18	■■■□□ 2.74
TUSC3-213	ENST00000515859	EXOSC9	Q06265	439 aa	Known RBP	32.17	■■■□□ 2.74
TUSC3-213	ENST00000515859	SLC52A2	Q9HAB3	445 aa		32.17	■■■□□ 2.74
TUSC3-213	ENST00000515859	SCN11A	Q9UI33	1791 aa		32.16	■■■□□ 2.74
TUSC3-213	ENST00000515859	ERVV-2	B6SEH9	535 aa		32.15	■■■□□ 2.74
TUSC3-213	ENST00000515859	ONECUT3	O60422	494 aa	Predicted RBP	32.14	■■■□□ 2.74
TUSC3-213	ENST00000515859	MIS18A	Q9NYP9	233 aa		32.14	■■■□□ 2.74
TUSC3-213	ENST00000515859	GLI3	P10071	1580 aa		32.13	■■■□□ 2.73
TUSC3-213	ENST00000515859	VIRMA	Q69YN4	1812 aa	Known RBP	32.13	■■■□□ 2.73
TUSC3-213	ENST00000515859	BTBD11	A6QL63	1104 aa		32.12	■■■□□ 2.73
TUSC3-213	ENST00000515859	MRC1	P22897	1456 aa		32.12	■■■□□ 2.73
TUSC3-213	ENST00000515859	CABP4	P57796	275 aa		32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms