RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 PARD3Q8TEW0 1356 aa26.32■■□□□ 1.8
LMNA-225ENST00000515824 ACSBG1Q96GR2 724 aa26.31■■□□□ 1.8
LMNA-225ENST00000515824 PLSCR1O15162 318 aa26.29■■□□□ 1.8
LMNA-225ENST00000515824 MTHFSP49914 203 aa26.29■■□□□ 1.8
LMNA-225ENST00000515824 PTF1AQ7RTS3 328 aa26.29■■□□□ 1.8
LMNA-225ENST00000515824 KCNQ2O43526 872 aa26.28■■□□□ 1.8
LMNA-225ENST00000515824 NCAPD2Q15021 1401 aa26.27■■□□□ 1.8
LMNA-225ENST00000515824 SBF2Q86WG5 1849 aa26.27■■□□□ 1.8
LMNA-225ENST00000515824 PCDH11XQ9BZA7 1347 aa26.25■■□□□ 1.79
LMNA-225ENST00000515824 PCDH11YQ9BZA8 1340 aa26.25■■□□□ 1.79
LMNA-225ENST00000515824 SPG7Q9UQ90 795 aa26.25■■□□□ 1.79
LMNA-225ENST00000515824 IGSF1Q8N6C5 1336 aa26.24■■□□□ 1.79
LMNA-225ENST00000515824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.23■■□□□ 1.79
LMNA-225ENST00000515824 IL13P35225 146 aa26.22■■□□□ 1.79
LMNA-225ENST00000515824 SYTL4Q96C24 671 aaPredicted RBP26.21■■□□□ 1.79
LMNA-225ENST00000515824 PRIM1P49642 420 aaKnown RBP26.2■■□□□ 1.78
LMNA-225ENST00000515824 NBPF14Q5TI25 921 aa26.2■■□□□ 1.78
LMNA-225ENST00000515824 CYP27B1O15528 508 aa26.19■■□□□ 1.78
LMNA-225ENST00000515824 KAT6BQ8WYB5 2073 aa26.19■■□□□ 1.78
LMNA-225ENST00000515824 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
LMNA-225ENST00000515824 DIAPH1O60610 1272 aaKnown RBP26.17■■□□□ 1.78
LMNA-225ENST00000515824 PLEKHG2Q9H7P9 1386 aa26.17■■□□□ 1.78
LMNA-225ENST00000515824 TXNRD1Q16881 649 aa26.16■■□□□ 1.78
LMNA-225ENST00000515824 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
LMNA-225ENST00000515824 PROM2Q8N271 834 aa26.16■■□□□ 1.78
LMNA-225ENST00000515824 SHANK3Q9BYB0 1731 aa26.16■■□□□ 1.78
LMNA-225ENST00000515824 PSDA5PKW4 1024 aaPredicted RBP26.15■■□□□ 1.78
LMNA-225ENST00000515824 PLEKHO1Q53GL0 409 aaPredicted RBP26.15■■□□□ 1.78
LMNA-225ENST00000515824 IFNL2Q8IZJ0 200 aa26.15■■□□□ 1.78
LMNA-225ENST00000515824 R3HDM1Q15032 1099 aaKnown RBP26.14■■□□□ 1.78
LMNA-225ENST00000515824 AEBP1Q8IUX7 1158 aa26.14■■□□□ 1.78
LMNA-225ENST00000515824 NKX1-1Q15270 411 aaPredicted RBP26.13■■□□□ 1.77
LMNA-225ENST00000515824 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
LMNA-225ENST00000515824 RGPD3A6NKT7 1758 aaPredicted RBP26.12■■□□□ 1.77
LMNA-225ENST00000515824 RGPD4Q7Z3J3 1758 aa26.12■■□□□ 1.77
LMNA-225ENST00000515824 RREB1Q92766 1687 aa26.12■■□□□ 1.77
LMNA-225ENST00000515824 PHKG2P15735 406 aa26.11■■□□□ 1.77
LMNA-225ENST00000515824 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
LMNA-225ENST00000515824 CFAP53Q96M91 514 aa26.11■■□□□ 1.77
LMNA-225ENST00000515824 PKD1L3Q7Z443 1732 aa26.11■■□□□ 1.77
LMNA-225ENST00000515824 KDRP35968 1356 aa26.1■■□□□ 1.77
LMNA-225ENST00000515824 PPP2R1AP30153 589 aa26.1■■□□□ 1.77
LMNA-225ENST00000515824 MPRIPQ6WCQ1 1025 aa26.08■■□□□ 1.77
LMNA-225ENST00000515824 BTAF1O14981 1849 aa26.07■■□□□ 1.76
LMNA-225ENST00000515824 HSP90AB1P08238 724 aaKnown RBP26.07■■□□□ 1.76
LMNA-225ENST00000515824 HMOX1P09601 288 aa26.07■■□□□ 1.76
LMNA-225ENST00000515824 NUP188Q5SRE5 1749 aa26.07■■□□□ 1.76
LMNA-225ENST00000515824 DOT1LQ8TEK3 1739 aa26.07■■□□□ 1.76
LMNA-225ENST00000515824 U2SURPO15042 1029 aaKnown RBP26.06■■□□□ 1.76
LMNA-225ENST00000515824 SLC27A3Q5K4L6 730 aa26.06■■□□□ 1.76
LMNA-225ENST00000515824 ZNF530Q6P9A1 599 aaPredicted RBP26.06■■□□□ 1.76
LMNA-225ENST00000515824 C1orf141Q5JVX7 400 aa26.04■■□□□ 1.76
LMNA-225ENST00000515824 STK32BQ9NY57 414 aa26.04■■□□□ 1.76
LMNA-225ENST00000515824 NUDCQ9Y266 331 aa26.04■■□□□ 1.76
LMNA-225ENST00000515824 COL3A1P02461 1466 aaPredicted RBP26.03■■□□□ 1.76
LMNA-225ENST00000515824 DCAF5Q96JK2 942 aa26.02■■□□□ 1.76
LMNA-225ENST00000515824 ANO8Q9HCE9 1232 aaPredicted RBP26.02■■□□□ 1.76
LMNA-225ENST00000515824 PIGBQ92521 554 aa26.01■■□□□ 1.75
LMNA-225ENST00000515824 LRRC4BQ9NT99 713 aa26.01■■□□□ 1.75
LMNA-225ENST00000515824 TMOD3Q9NYL9 352 aa26.01■■□□□ 1.75
LMNA-225ENST00000515824 SLC15A2Q16348 729 aa26■■□□□ 1.75
LMNA-225ENST00000515824 SMARCC1Q92922 1105 aaPredicted RBP26■■□□□ 1.75
LMNA-225ENST00000515824 ERVV-2B6SEH9 535 aa25.99■■□□□ 1.75
LMNA-225ENST00000515824 RALBP1Q15311 655 aa25.99■■□□□ 1.75
LMNA-225ENST00000515824 SRCAPQ6ZRS2 3230 aa25.98■■□□□ 1.75
LMNA-225ENST00000515824 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
LMNA-225ENST00000515824 HMGB2P26583 209 aaKnown RBP25.97■■□□□ 1.75
LMNA-225ENST00000515824 AKAP4Q5JQC9 854 aa25.97■■□□□ 1.75
LMNA-225ENST00000515824 PALLDQ8WX93 1383 aa25.95■■□□□ 1.75
LMNA-225ENST00000515824 KCNQ4P56696 695 aa25.95■■□□□ 1.74
LMNA-225ENST00000515824 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
LMNA-225ENST00000515824 CABP4P57796 275 aa25.94■■□□□ 1.74
LMNA-225ENST00000515824 MTHFSDQ2M296 383 aaKnown RBP25.94■■□□□ 1.74
LMNA-225ENST00000515824 U2AF1L5P0DN76 240 aaPredicted RBP25.93■■□□□ 1.74
LMNA-225ENST00000515824 U2AF1Q01081 240 aaKnown RBP eCLIP25.93■■□□□ 1.74
LMNA-225ENST00000515824 ITGB4P16144 1822 aa25.92■■□□□ 1.74
LMNA-225ENST00000515824 ASAP1Q9ULH1 1129 aa25.91■■□□□ 1.74
LMNA-225ENST00000515824 KDM6AO15550 1401 aaPredicted RBP25.9■■□□□ 1.74
LMNA-225ENST00000515824 ZNF827Q17R98 1081 aa25.9■■□□□ 1.74
LMNA-225ENST00000515824 GAS2L2Q8NHY3 880 aa25.9■■□□□ 1.74
LMNA-225ENST00000515824 AKT1S1Q96B36 256 aa25.9■■□□□ 1.74
LMNA-225ENST00000515824 ATG3Q9NT62 314 aa25.9■■□□□ 1.74
LMNA-225ENST00000515824 LY75O60449 1722 aa25.9■■□□□ 1.74
LMNA-225ENST00000515824 FCHSD2O94868 740 aa25.89■■□□□ 1.74
LMNA-225ENST00000515824 PRKAR2BP31323 418 aa25.89■■□□□ 1.74
LMNA-225ENST00000515824 RSPH6AQ9H0K4 717 aa25.89■■□□□ 1.74
LMNA-225ENST00000515824 ZNF316A6NFI3 1004 aaPredicted RBP25.88■■□□□ 1.73
LMNA-225ENST00000515824 NFATC2IPQ8NCF5 419 aa25.88■■□□□ 1.73
LMNA-225ENST00000515824 LOC102724428A0A0B4J2F2 783 aa25.87■■□□□ 1.73
LMNA-225ENST00000515824 SIK1P57059 783 aa25.87■■□□□ 1.73
LMNA-225ENST00000515824 SPON1Q9HCB6 807 aa25.87■■□□□ 1.73
LMNA-225ENST00000515824 TFCP2L1Q9NZI6 479 aa25.87■■□□□ 1.73
LMNA-225ENST00000515824 PAPPAQ13219 1627 aa25.87■■□□□ 1.73
LMNA-225ENST00000515824 RNMTO43148 476 aaKnown RBP25.86■■□□□ 1.73
LMNA-225ENST00000515824 PDGFDQ9GZP0 370 aaPredicted RBP25.86■■□□□ 1.73
LMNA-225ENST00000515824 LGR6Q9HBX8 967 aa25.86■■□□□ 1.73
LMNA-225ENST00000515824 PHACTR3Q96KR7 559 aa25.84■■□□□ 1.73
LMNA-225ENST00000515824 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
LMNA-225ENST00000515824 GNAT3A8MTJ3 354 aa25.83■■□□□ 1.73
LMNA-225ENST00000515824 ATP6V1AP38606 617 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 316.6 ms