RNA–Protein interactions for RNA: ENST00000515725.5

COPG1-210, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-210ENST00000515725 F6X3S4 739 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 RARSP54136 660 aaKnown RBP11.58□□□□□ -0.56
COPG1-210ENST00000515725 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 LRRC7Q96NW7 1537 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 CABP4P57796 275 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 FKBP5Q13451 457 aaPredicted RBP11.58□□□□□ -0.56
COPG1-210ENST00000515725 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
COPG1-210ENST00000515725 ERBB3P21860 1342 aa11.57□□□□□ -0.56
COPG1-210ENST00000515725 NPM2Q86SE8 214 aaKnown RBP11.57□□□□□ -0.56
COPG1-210ENST00000515725 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
COPG1-210ENST00000515725 OVOS2A0A0J9YW53 1432 aa11.57□□□□□ -0.56
COPG1-210ENST00000515725 OVOS2Q6IE36 1432 aa11.57□□□□□ -0.56
COPG1-210ENST00000515725 FAM98CQ17RN3 349 aaKnown RBP11.57□□□□□ -0.56
COPG1-210ENST00000515725 MAP2P11137 1827 aaKnown RBP11.57□□□□□ -0.56
COPG1-210ENST00000515725 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
COPG1-210ENST00000515725 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
COPG1-210ENST00000515725 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 SPG7Q9UQ90 795 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 INSRP06213 1382 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 HSPA1LP34931 641 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
COPG1-210ENST00000515725 RLBP1P12271 317 aa11.55□□□□□ -0.56
COPG1-210ENST00000515725 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
COPG1-210ENST00000515725 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
COPG1-210ENST00000515725 ZCRB1Q8TBF4 217 aaKnown RBP11.54□□□□□ -0.56
COPG1-210ENST00000515725 CERKQ8TCT0 537 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 KCNQ4P56696 695 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 NALCNQ8IZF0 1738 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
COPG1-210ENST00000515725 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
COPG1-210ENST00000515725 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
COPG1-210ENST00000515725 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
COPG1-210ENST00000515725 JARID2Q92833 1246 aaPredicted RBP11.53□□□□□ -0.56
COPG1-210ENST00000515725 IL2RBP14784 551 aa11.53□□□□□ -0.56
COPG1-210ENST00000515725 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
COPG1-210ENST00000515725 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
COPG1-210ENST00000515725 EXOC5O00471 708 aa11.52□□□□□ -0.56
COPG1-210ENST00000515725 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.56
COPG1-210ENST00000515725 IFT57Q9NWB7 429 aa11.52□□□□□ -0.56
COPG1-210ENST00000515725 USP31Q70CQ4 1352 aa11.52□□□□□ -0.56
COPG1-210ENST00000515725 IFNL2Q8IZJ0 200 aa11.52□□□□□ -0.57
COPG1-210ENST00000515725 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
COPG1-210ENST00000515725 SOS2Q07890 1332 aaPredicted RBP11.52□□□□□ -0.57
COPG1-210ENST00000515725 TRIM27P14373 513 aa11.52□□□□□ -0.57
COPG1-210ENST00000515725 G2E3Q7L622 706 aa11.52□□□□□ -0.57
COPG1-210ENST00000515725 AMOTQ4VCS5 1084 aa11.51□□□□□ -0.57
COPG1-210ENST00000515725 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
COPG1-210ENST00000515725 SSH2Q76I76 1423 aa11.51□□□□□ -0.57
COPG1-210ENST00000515725 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
COPG1-210ENST00000515725 VAMP4O75379 141 aa11.51□□□□□ -0.57
COPG1-210ENST00000515725 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
COPG1-210ENST00000515725 ITSN1Q15811 1721 aa11.51□□□□□ -0.57
COPG1-210ENST00000515725 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
COPG1-210ENST00000515725 CYP27B1O15528 508 aa11.5□□□□□ -0.57
COPG1-210ENST00000515725 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
COPG1-210ENST00000515725 AKAP4Q5JQC9 854 aa11.5□□□□□ -0.57
COPG1-210ENST00000515725 PHAXQ9H814 394 aaKnown RBP11.5□□□□□ -0.57
COPG1-210ENST00000515725 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
COPG1-210ENST00000515725 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 DDB1Q16531 1140 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 USP21Q9UK80 565 aa11.49□□□□□ -0.57
COPG1-210ENST00000515725 TMOD3Q9NYL9 352 aa11.48□□□□□ -0.57
COPG1-210ENST00000515725 PRIM1P49642 420 aaKnown RBP11.48□□□□□ -0.57
COPG1-210ENST00000515725 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
COPG1-210ENST00000515725 GOLGB1Q14789 3259 aaKnown RBP11.47□□□□□ -0.57
COPG1-210ENST00000515725 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
COPG1-210ENST00000515725 CHL1O00533 1208 aa11.47□□□□□ -0.57
COPG1-210ENST00000515725 PHKG2P15735 406 aa11.47□□□□□ -0.57
COPG1-210ENST00000515725 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
COPG1-210ENST00000515725 CCDC30Q5VVM6 783 aa11.47□□□□□ -0.57
COPG1-210ENST00000515725 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
COPG1-210ENST00000515725 RIC3Q7Z5B4 369 aa11.46□□□□□ -0.57
COPG1-210ENST00000515725 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.57
COPG1-210ENST00000515725 STRCQ7RTU9 1775 aa11.46□□□□□ -0.58
COPG1-210ENST00000515725 USP19O94966 1318 aa11.46□□□□□ -0.58
COPG1-210ENST00000515725 EIF5BO60841 1220 aaKnown RBP11.46□□□□□ -0.58
COPG1-210ENST00000515725 STRCP1A6NGW2 1772 aa11.46□□□□□ -0.58
COPG1-210ENST00000515725 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 ASAP1Q9ULH1 1129 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 KIF16BQ96L93 1317 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 FMN2Q9NZ56 1722 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 NPHP1O15259 732 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
COPG1-210ENST00000515725 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
COPG1-210ENST00000515725 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
COPG1-210ENST00000515725 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
COPG1-210ENST00000515725 PI4KAP2A4QPH2 592 aa11.44□□□□□ -0.58
COPG1-210ENST00000515725 A1BGP04217 495 aa11.44□□□□□ -0.58
COPG1-210ENST00000515725 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
COPG1-210ENST00000515725 TRMT2AQ8IZ69 625 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms