RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 XIRP1Q702N8 1843 aaKnown RBP19.78■□□□□ 0.76
THUMPD3-210ENST00000515662 IPO8O15397 1037 aaKnown RBP19.78■□□□□ 0.76
THUMPD3-210ENST00000515662 TWISTNBQ3B726 338 aaPredicted RBP19.78■□□□□ 0.76
THUMPD3-210ENST00000515662 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
THUMPD3-210ENST00000515662 RTF1Q92541 710 aaKnown RBP19.77■□□□□ 0.75
THUMPD3-210ENST00000515662 ELL2O00472 640 aaPredicted RBP19.76■□□□□ 0.75
THUMPD3-210ENST00000515662 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
THUMPD3-210ENST00000515662 USHBP1Q8N6Y0 703 aa19.76■□□□□ 0.75
THUMPD3-210ENST00000515662 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 IGHDP01880 384 aa19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
THUMPD3-210ENST00000515662 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
THUMPD3-210ENST00000515662 MED1Q15648 1581 aaPredicted RBP19.73■□□□□ 0.75
THUMPD3-210ENST00000515662 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
THUMPD3-210ENST00000515662 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
THUMPD3-210ENST00000515662 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
THUMPD3-210ENST00000515662 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
THUMPD3-210ENST00000515662 LRRC37A3O60309 1634 aa19.72■□□□□ 0.75
THUMPD3-210ENST00000515662 ARHGAP45Q92619 1136 aa19.72■□□□□ 0.75
THUMPD3-210ENST00000515662 MAP3K5Q99683 1374 aa19.71■□□□□ 0.75
THUMPD3-210ENST00000515662 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
THUMPD3-210ENST00000515662 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
THUMPD3-210ENST00000515662 DDX19BQ9UMR2 479 aa19.71■□□□□ 0.75
THUMPD3-210ENST00000515662 RGPD2P0DJD1 1756 aa19.71■□□□□ 0.75
THUMPD3-210ENST00000515662 PXDNQ92626 1479 aa19.7■□□□□ 0.74
THUMPD3-210ENST00000515662 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
THUMPD3-210ENST00000515662 LRRC59Q96AG4 307 aaKnown RBP19.7■□□□□ 0.74
THUMPD3-210ENST00000515662 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
THUMPD3-210ENST00000515662 NCAPD2Q15021 1401 aa19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 MIS18AQ9NYP9 233 aa19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 TNS3Q68CZ2 1445 aa19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 HAP1P54257 671 aaPredicted RBP19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
THUMPD3-210ENST00000515662 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
THUMPD3-210ENST00000515662 IL17REQ8NFR9 667 aa19.68■□□□□ 0.74
THUMPD3-210ENST00000515662 BRINP3Q76B58 766 aa19.67■□□□□ 0.74
THUMPD3-210ENST00000515662 ZC3H6P61129 1189 aaKnown RBP19.66■□□□□ 0.74
THUMPD3-210ENST00000515662 CAMTA1Q9Y6Y1 1673 aa19.66■□□□□ 0.74
THUMPD3-210ENST00000515662 SPATA31A3Q5VYP0 1347 aa19.66■□□□□ 0.74
THUMPD3-210ENST00000515662 RWDD1Q9H446 243 aaPredicted RBP19.65■□□□□ 0.74
THUMPD3-210ENST00000515662 ZBTB40Q9NUA8 1239 aa19.65■□□□□ 0.74
THUMPD3-210ENST00000515662 ABCC4O15439 1325 aa19.64■□□□□ 0.73
THUMPD3-210ENST00000515662 PDE4AP27815 886 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 API5Q9BZZ5 524 aaKnown RBP19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 SLAIN2Q9P270 581 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 RGPD5Q99666 1765 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 ERBB3P21860 1342 aa19.63■□□□□ 0.73
THUMPD3-210ENST00000515662 CABLES1Q8TDN4 633 aa19.62■□□□□ 0.73
THUMPD3-210ENST00000515662 CEMIPQ8WUJ3 1361 aa19.62■□□□□ 0.73
THUMPD3-210ENST00000515662 TAF7Q15545 349 aaPredicted RBP19.62■□□□□ 0.73
THUMPD3-210ENST00000515662 PLEKHO1Q53GL0 409 aaPredicted RBP19.62■□□□□ 0.73
THUMPD3-210ENST00000515662 BACH2Q9BYV9 841 aa19.62■□□□□ 0.73
THUMPD3-210ENST00000515662 AMOTQ4VCS5 1084 aa19.61■□□□□ 0.73
THUMPD3-210ENST00000515662 LMO7Q8WWI1 1683 aa19.61■□□□□ 0.73
THUMPD3-210ENST00000515662 COL18A1P39060 1754 aa19.61■□□□□ 0.73
THUMPD3-210ENST00000515662 RGS3P49796 1198 aa19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 HDAC1Q13547 482 aaPredicted RBP19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 ZNF530Q6P9A1 599 aaPredicted RBP19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 AKAP4Q5JQC9 854 aa19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 ABCC6O95255 1503 aa19.59■□□□□ 0.73
THUMPD3-210ENST00000515662 CHMP4BQ9H444 224 aaKnown RBP19.58■□□□□ 0.73
THUMPD3-210ENST00000515662 SOS2Q07890 1332 aaPredicted RBP19.58■□□□□ 0.72
THUMPD3-210ENST00000515662 RGS12O14924 1447 aa19.57■□□□□ 0.72
THUMPD3-210ENST00000515662 CPDO75976 1380 aa19.57■□□□□ 0.72
THUMPD3-210ENST00000515662 LGR6Q9HBX8 967 aa19.57■□□□□ 0.72
THUMPD3-210ENST00000515662 PTPRCP08575 1304 aa19.57■□□□□ 0.72
THUMPD3-210ENST00000515662 SLC4A2P04920 1241 aa19.56■□□□□ 0.72
THUMPD3-210ENST00000515662 SOS1Q07889 1333 aaPredicted RBP19.56■□□□□ 0.72
THUMPD3-210ENST00000515662 ERICH6Q7L0X2 663 aa19.56■□□□□ 0.72
THUMPD3-210ENST00000515662 CHRNA2Q15822 529 aa19.55■□□□□ 0.72
THUMPD3-210ENST00000515662 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
THUMPD3-210ENST00000515662 NLRP2Q9NX02 1062 aa19.55■□□□□ 0.72
THUMPD3-210ENST00000515662 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
THUMPD3-210ENST00000515662 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
THUMPD3-210ENST00000515662 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
THUMPD3-210ENST00000515662 MPRIPQ6WCQ1 1025 aa19.54■□□□□ 0.72
THUMPD3-210ENST00000515662 OVOS2A0A0G2JMS6 1433 aa19.54■□□□□ 0.72
THUMPD3-210ENST00000515662 RNMTO43148 476 aaKnown RBP19.52■□□□□ 0.72
THUMPD3-210ENST00000515662 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
THUMPD3-210ENST00000515662 CCDC30Q5VVM6 783 aa19.52■□□□□ 0.72
THUMPD3-210ENST00000515662 KDM3BQ7LBC6 1761 aa19.52■□□□□ 0.71
THUMPD3-210ENST00000515662 TEFQ10587 303 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 STK31Q9BXU1 1019 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 G2E3Q7L622 706 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
THUMPD3-210ENST00000515662 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
THUMPD3-210ENST00000515662 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
THUMPD3-210ENST00000515662 C1orf115Q9H7X2 142 aa19.49■□□□□ 0.71
THUMPD3-210ENST00000515662 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
THUMPD3-210ENST00000515662 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
THUMPD3-210ENST00000515662 BTBD11A6QL63 1104 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms