RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
COL4A5-210ENST00000515658 CARD10Q9BWT7 1032 aa13.81□□□□□ -0.2
COL4A5-210ENST00000515658 THRAP3Q9Y2W1 955 aaKnown RBP13.81□□□□□ -0.2
COL4A5-210ENST00000515658 ABCC6O95255 1503 aa13.8□□□□□ -0.2
COL4A5-210ENST00000515658 PDE3BQ13370 1112 aa13.8□□□□□ -0.2
COL4A5-210ENST00000515658 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
COL4A5-210ENST00000515658 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-210ENST00000515658 COG3Q96JB2 828 aa13.79□□□□□ -0.2
COL4A5-210ENST00000515658 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
COL4A5-210ENST00000515658 HOXC9P31274 260 aa13.78□□□□□ -0.2
COL4A5-210ENST00000515658 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
COL4A5-210ENST00000515658 IP6K1Q92551 441 aa13.78□□□□□ -0.2
COL4A5-210ENST00000515658 FAM208AQ9UK61 1670 aaKnown RBP13.78□□□□□ -0.2
COL4A5-210ENST00000515658 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL4A5-210ENST00000515658 EVX2Q03828 476 aa13.77□□□□□ -0.21
COL4A5-210ENST00000515658 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
COL4A5-210ENST00000515658 DDB1Q16531 1140 aa13.77□□□□□ -0.21
COL4A5-210ENST00000515658 SBF2Q86WG5 1849 aa13.77□□□□□ -0.21
COL4A5-210ENST00000515658 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-210ENST00000515658 CAMKK2Q96RR4 588 aa13.77□□□□□ -0.21
COL4A5-210ENST00000515658 APBA3O96018 575 aa13.76□□□□□ -0.21
COL4A5-210ENST00000515658 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
COL4A5-210ENST00000515658 USHBP1Q8N6Y0 703 aa13.76□□□□□ -0.21
COL4A5-210ENST00000515658 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 BAG6P46379 1132 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 NUP188Q5SRE5 1749 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 RREB1Q92766 1687 aa13.75□□□□□ -0.21
COL4A5-210ENST00000515658 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
COL4A5-210ENST00000515658 KCNQ2O43526 872 aa13.74□□□□□ -0.21
COL4A5-210ENST00000515658 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
COL4A5-210ENST00000515658 MEGF6O75095 1541 aa13.74□□□□□ -0.21
COL4A5-210ENST00000515658 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 AMPHP49418 695 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 NBPF6Q5VWK0 638 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 NBPF4Q96M43 638 aa13.73□□□□□ -0.21
COL4A5-210ENST00000515658 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
COL4A5-210ENST00000515658 PANK3Q9H999 370 aa13.72□□□□□ -0.21
COL4A5-210ENST00000515658 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
COL4A5-210ENST00000515658 IL2RBP14784 551 aa13.71□□□□□ -0.21
COL4A5-210ENST00000515658 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.21
COL4A5-210ENST00000515658 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
COL4A5-210ENST00000515658 EXOC5O00471 708 aa13.7□□□□□ -0.22
COL4A5-210ENST00000515658 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
COL4A5-210ENST00000515658 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
COL4A5-210ENST00000515658 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-210ENST00000515658 PPM1GO15355 546 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-210ENST00000515658 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-210ENST00000515658 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
COL4A5-210ENST00000515658 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
COL4A5-210ENST00000515658 BCL9O00512 1426 aa13.67□□□□□ -0.22
COL4A5-210ENST00000515658 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
COL4A5-210ENST00000515658 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
COL4A5-210ENST00000515658 PDGFDQ9GZP0 370 aaPredicted RBP13.67□□□□□ -0.22
COL4A5-210ENST00000515658 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
COL4A5-210ENST00000515658 INSRP06213 1382 aa13.67□□□□□ -0.22
COL4A5-210ENST00000515658 CGNL1Q0VF96 1302 aa13.66□□□□□ -0.22
COL4A5-210ENST00000515658 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
COL4A5-210ENST00000515658 FLT4P35916 1363 aa13.66□□□□□ -0.22
COL4A5-210ENST00000515658 MAP2P11137 1827 aaKnown RBP13.66□□□□□ -0.22
COL4A5-210ENST00000515658 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
COL4A5-210ENST00000515658 BTAF1O14981 1849 aa13.65□□□□□ -0.22
COL4A5-210ENST00000515658 NSD2O96028 1365 aa13.64□□□□□ -0.23
COL4A5-210ENST00000515658 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-210ENST00000515658 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
COL4A5-210ENST00000515658 KCNQ4P56696 695 aa13.63□□□□□ -0.23
COL4A5-210ENST00000515658 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
COL4A5-210ENST00000515658 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
COL4A5-210ENST00000515658 NUBP1P53384 320 aa13.62□□□□□ -0.23
COL4A5-210ENST00000515658 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
COL4A5-210ENST00000515658 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-210ENST00000515658 EYA1Q99502 592 aa13.62□□□□□ -0.23
COL4A5-210ENST00000515658 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
COL4A5-210ENST00000515658 TOGARAM1Q9Y4F4 1720 aa13.61□□□□□ -0.23
COL4A5-210ENST00000515658 LRP5O75197 1615 aa13.61□□□□□ -0.23
COL4A5-210ENST00000515658 PLSCR1O15162 318 aa13.61□□□□□ -0.23
COL4A5-210ENST00000515658 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-210ENST00000515658 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
COL4A5-210ENST00000515658 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
COL4A5-210ENST00000515658 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
COL4A5-210ENST00000515658 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
COL4A5-210ENST00000515658 CYP27B1O15528 508 aa13.6□□□□□ -0.23
COL4A5-210ENST00000515658 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
COL4A5-210ENST00000515658 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
COL4A5-210ENST00000515658 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
COL4A5-210ENST00000515658 KIF24Q5T7B8 1368 aa13.59□□□□□ -0.23
COL4A5-210ENST00000515658 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
COL4A5-210ENST00000515658 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-210ENST00000515658 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
COL4A5-210ENST00000515658 MORC1Q86VD1 984 aa13.58□□□□□ -0.24
COL4A5-210ENST00000515658 SYTL4Q96C24 671 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-210ENST00000515658 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
COL4A5-210ENST00000515658 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
COL4A5-210ENST00000515658 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
COL4A5-210ENST00000515658 LHX8Q68G74 356 aa13.57□□□□□ -0.24
COL4A5-210ENST00000515658 AEBP1Q8IUX7 1158 aa13.57□□□□□ -0.24
COL4A5-210ENST00000515658 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms