RNA–Protein interactions for RNA: ENST00000515452.1

NR1I3-233, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 2 BASIC

Gene NR1I3, Length 1,093 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-233	ENST00000515452	AATK	Q6ZMQ8	1374 aa		10.82	□□□□□ -0.68
NR1I3-233	ENST00000515452	GC	P02774	474 aa		10.82	□□□□□ -0.68
NR1I3-233	ENST00000515452	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.82	□□□□□ -0.68
NR1I3-233	ENST00000515452	TOM1L2	Q6ZVM7	507 aa		10.82	□□□□□ -0.68
NR1I3-233	ENST00000515452	TTC21A	Q8NDW8	1320 aa		10.82	□□□□□ -0.68
NR1I3-233	ENST00000515452	YBX3	P16989	372 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
NR1I3-233	ENST00000515452	MAP2	P11137	1827 aa	Known RBP	10.81	□□□□□ -0.68
NR1I3-233	ENST00000515452	PEAK1	Q9H792	1746 aa		10.81	□□□□□ -0.68
NR1I3-233	ENST00000515452	USP31	Q70CQ4	1352 aa		10.8	□□□□□ -0.68
NR1I3-233	ENST00000515452	NLRP6	P59044	892 aa		10.8	□□□□□ -0.68
NR1I3-233	ENST00000515452	TNS4	Q8IZW8	715 aa		10.8	□□□□□ -0.68
NR1I3-233	ENST00000515452	NLGN2	Q8NFZ4	835 aa		10.8	□□□□□ -0.68
NR1I3-233	ENST00000515452	PANK3	Q9H999	370 aa		10.8	□□□□□ -0.68
NR1I3-233	ENST00000515452	ZNF526	Q8TF50	670 aa	Predicted RBP	10.79	□□□□□ -0.68
NR1I3-233	ENST00000515452	RGPD2	P0DJD1	1756 aa		10.78	□□□□□ -0.68
NR1I3-233	ENST00000515452	FYB1	O15117	783 aa		10.78	□□□□□ -0.68
NR1I3-233	ENST00000515452	SOX12	O15370	315 aa		10.78	□□□□□ -0.68
NR1I3-233	ENST00000515452	GGNBP2	Q9H3C7	697 aa		10.78	□□□□□ -0.68
NR1I3-233	ENST00000515452	COL5A2	P05997	1499 aa	Predicted RBP	10.78	□□□□□ -0.68
NR1I3-233	ENST00000515452	KIF3C	O14782	793 aa		10.77	□□□□□ -0.69
NR1I3-233	ENST00000515452	SLC34A2	O95436	690 aa		10.77	□□□□□ -0.69
NR1I3-233	ENST00000515452	FBLN1	P23142	703 aa		10.77	□□□□□ -0.69
NR1I3-233	ENST00000515452	ZBTB7C	A1YPR0	619 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	TOMM70	O94826	608 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	ZNF827	Q17R98	1081 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	AKT1S1	Q96B36	256 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	PCDH10	Q9P2E7	1040 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	WNK3	Q9BYP7	1800 aa		10.76	□□□□□ -0.69
NR1I3-233	ENST00000515452	SLC27A3	Q5K4L6	730 aa		10.75	□□□□□ -0.69
NR1I3-233	ENST00000515452	CARD10	Q9BWT7	1032 aa		10.75	□□□□□ -0.69
NR1I3-233	ENST00000515452	WDR17	Q8IZU2	1322 aa		10.75	□□□□□ -0.69
NR1I3-233	ENST00000515452	PER1	O15534	1290 aa	Predicted RBP	10.74	□□□□□ -0.69
NR1I3-233	ENST00000515452	JMY	Q8N9B5	988 aa		10.74	□□□□□ -0.69
NR1I3-233	ENST00000515452	ACSBG1	Q96GR2	724 aa		10.74	□□□□□ -0.69
NR1I3-233	ENST00000515452	LRRC4B	Q9NT99	713 aa		10.74	□□□□□ -0.69
NR1I3-233	ENST00000515452	TFCP2L1	Q9NZI6	479 aa		10.74	□□□□□ -0.69
NR1I3-233	ENST00000515452	ARHGEF25	Q86VW2	580 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	KLRG1	Q96E93	195 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	COG3	Q96JB2	828 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	CD2AP	Q9Y5K6	639 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	PNPLA7	Q6ZV29	1317 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	ADCY9	O60503	1353 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	ABCC6	O95255	1503 aa		10.73	□□□□□ -0.69
NR1I3-233	ENST00000515452	CSB-PGBD3	P0DP91	1061 aa		10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	KCNH5	Q8NCM2	988 aa		10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	AXIN2	Q9Y2T1	843 aa		10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	CGNL1	Q0VF96	1302 aa		10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	LRRC37A3	O60309	1634 aa		10.72	□□□□□ -0.69
NR1I3-233	ENST00000515452	FAM208A	Q9UK61	1670 aa	Known RBP	10.71	□□□□□ -0.69
NR1I3-233	ENST00000515452	GOLGB1	Q14789	3259 aa	Known RBP	10.71	□□□□□ -0.7
NR1I3-233	ENST00000515452	MAP3K19	Q56UN5	1328 aa		10.7	□□□□□ -0.7
NR1I3-233	ENST00000515452	RRS1	Q15050	365 aa	Known RBP	10.7	□□□□□ -0.7
NR1I3-233	ENST00000515452	NSD2	O96028	1365 aa		10.69	□□□□□ -0.7
NR1I3-233	ENST00000515452	TNNT2	P45379	298 aa	Predicted RBP	10.69	□□□□□ -0.7
NR1I3-233	ENST00000515452	CNGB1	Q14028	1251 aa	Predicted RBP	10.69	□□□□□ -0.7
NR1I3-233	ENST00000515452	WWC3	Q9ULE0	1092 aa		10.69	□□□□□ -0.7
NR1I3-233	ENST00000515452	KNSTRN	Q9Y448	316 aa		10.69	□□□□□ -0.7
NR1I3-233	ENST00000515452	COL24A1	Q17RW2	1714 aa		10.68	□□□□□ -0.7
NR1I3-233	ENST00000515452	DDX10	Q13206	875 aa	Known RBP	10.68	□□□□□ -0.7
NR1I3-233	ENST00000515452	CC2D1B	Q5T0F9	858 aa	Known RBP	10.68	□□□□□ -0.7
NR1I3-233	ENST00000515452	KAT6B	Q8WYB5	2073 aa		10.68	□□□□□ -0.7
NR1I3-233	ENST00000515452	PAPPA	Q13219	1627 aa		10.67	□□□□□ -0.7
NR1I3-233	ENST00000515452	HMGB2	P26583	209 aa	Known RBP	10.67	□□□□□ -0.7
NR1I3-233	ENST00000515452	EMILIN1	Q9Y6C2	1016 aa		10.67	□□□□□ -0.7
NR1I3-233	ENST00000515452	SMG6	Q86US8	1419 aa	Known RBP	10.67	□□□□□ -0.7
NR1I3-233	ENST00000515452	NPC1L1	Q9UHC9	1359 aa		10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	HOXC9	P31274	260 aa		10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	MORC1	Q86VD1	984 aa		10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	COL23A1	Q86Y22	540 aa	Predicted RBP	10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	RBM46	Q8TBY0	533 aa	Known RBP	10.66	□□□□□ -0.7
NR1I3-233	ENST00000515452	RTL1	A6NKG5	1358 aa		10.65	□□□□□ -0.7
NR1I3-233	ENST00000515452	FSTL1	Q12841	308 aa		10.65	□□□□□ -0.7
NR1I3-233	ENST00000515452	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.65	□□□□□ -0.7
NR1I3-233	ENST00000515452	IP6K1	Q92551	441 aa		10.65	□□□□□ -0.7
NR1I3-233	ENST00000515452	POLK	Q9UBT6	870 aa		10.65	□□□□□ -0.7
NR1I3-233	ENST00000515452	ERBB3	P21860	1342 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	IL2RB	P14784	551 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	AMPH	P49418	695 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	HSP90AB2P	Q58FF8	381 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	FLAD1	Q8NFF5	587 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	ANKRD24	Q8TF21	1146 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	LTV1	Q96GA3	475 aa	Predicted RBP	10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	QSER1	Q2KHR3	1735 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	FLT4	P35916	1363 aa		10.64	□□□□□ -0.71
NR1I3-233	ENST00000515452	NHS	Q6T4R5	1651 aa		10.63	□□□□□ -0.71
NR1I3-233	ENST00000515452	PPM1G	O15355	546 aa	Predicted RBP	10.63	□□□□□ -0.71
NR1I3-233	ENST00000515452	HTRA3	P83110	453 aa		10.63	□□□□□ -0.71
NR1I3-233	ENST00000515452	TNS2	Q63HR2	1409 aa		10.63	□□□□□ -0.71
NR1I3-233	ENST00000515452	INSR	P06213	1382 aa		10.63	□□□□□ -0.71
NR1I3-233	ENST00000515452	COL3A1	P02461	1466 aa	Predicted RBP	10.62	□□□□□ -0.71
NR1I3-233	ENST00000515452	KCNQ4	P56696	695 aa		10.62	□□□□□ -0.71
NR1I3-233	ENST00000515452	MSL1	Q68DK7	614 aa		10.62	□□□□□ -0.71
NR1I3-233	ENST00000515452	KIF24	Q5T7B8	1368 aa		10.62	□□□□□ -0.71
NR1I3-233	ENST00000515452	IGSF1	Q8N6C5	1336 aa		10.61	□□□□□ -0.71
NR1I3-233	ENST00000515452	NMRK2	Q9NPI5	230 aa		10.61	□□□□□ -0.71
NR1I3-233	ENST00000515452	NLRP2	Q9NX02	1062 aa		10.61	□□□□□ -0.71
NR1I3-233	ENST00000515452	CCNL1	Q9UK58	526 aa	Predicted RBP	10.61	□□□□□ -0.71
NR1I3-233	ENST00000515452	HSPA1A	P0DMV8	641 aa	Known RBP	10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms