RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 IL2RBP14784 551 aa18.95■□□□□ 0.62
RAB3A-204ENST00000515410 TMF1P82094 1093 aa18.95■□□□□ 0.62
RAB3A-204ENST00000515410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.94■□□□□ 0.62
RAB3A-204ENST00000515410 TFCP2L1Q9NZI6 479 aa18.94■□□□□ 0.62
RAB3A-204ENST00000515410 ERBB3P21860 1342 aa18.94■□□□□ 0.62
RAB3A-204ENST00000515410 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
RAB3A-204ENST00000515410 GPBP1L1Q9HC44 474 aaPredicted RBP18.93■□□□□ 0.62
RAB3A-204ENST00000515410 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
RAB3A-204ENST00000515410 NME9Q86XW9 330 aa18.92■□□□□ 0.62
RAB3A-204ENST00000515410 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
RAB3A-204ENST00000515410 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
RAB3A-204ENST00000515410 ADCY9O60503 1353 aa18.89■□□□□ 0.61
RAB3A-204ENST00000515410 ANKRD36BQ8N2N9 1353 aa18.88■□□□□ 0.61
RAB3A-204ENST00000515410 KCNQ4P56696 695 aa18.87■□□□□ 0.61
RAB3A-204ENST00000515410 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
RAB3A-204ENST00000515410 ANKRD24Q8TF21 1146 aa18.85■□□□□ 0.61
RAB3A-204ENST00000515410 ZNF526Q8TF50 670 aaPredicted RBP18.84■□□□□ 0.61
RAB3A-204ENST00000515410 LTN1O94822 1766 aa18.83■□□□□ 0.61
RAB3A-204ENST00000515410 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
RAB3A-204ENST00000515410 CD2APQ9Y5K6 639 aa18.83■□□□□ 0.6
RAB3A-204ENST00000515410 MSH5O43196 834 aa18.82■□□□□ 0.6
RAB3A-204ENST00000515410 COL23A1Q86Y22 540 aaPredicted RBP18.82■□□□□ 0.6
RAB3A-204ENST00000515410 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
RAB3A-204ENST00000515410 COG3Q96JB2 828 aa18.82■□□□□ 0.6
RAB3A-204ENST00000515410 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
RAB3A-204ENST00000515410 CCNL1Q9UK58 526 aaPredicted RBP18.81■□□□□ 0.6
RAB3A-204ENST00000515410 NSD2O96028 1365 aa18.81■□□□□ 0.6
RAB3A-204ENST00000515410 KAT6BQ8WYB5 2073 aa18.8■□□□□ 0.6
RAB3A-204ENST00000515410 FYB1O15117 783 aa18.8■□□□□ 0.6
RAB3A-204ENST00000515410 MSL1Q68DK7 614 aa18.8■□□□□ 0.6
RAB3A-204ENST00000515410 IP6K1Q92551 441 aa18.79■□□□□ 0.6
RAB3A-204ENST00000515410 LY75O60449 1722 aa18.78■□□□□ 0.6
RAB3A-204ENST00000515410 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
RAB3A-204ENST00000515410 KIF3CO14782 793 aa18.77■□□□□ 0.6
RAB3A-204ENST00000515410 APLP1P51693 650 aa18.76■□□□□ 0.59
RAB3A-204ENST00000515410 CARD14Q9BXL6 1004 aa18.75■□□□□ 0.59
RAB3A-204ENST00000515410 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
RAB3A-204ENST00000515410 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
RAB3A-204ENST00000515410 MAP3K19Q56UN5 1328 aa18.74■□□□□ 0.59
RAB3A-204ENST00000515410 HSPA5P11021 654 aaKnown RBP18.73■□□□□ 0.59
RAB3A-204ENST00000515410 DNAJC5GQ8N7S2 189 aa18.73■□□□□ 0.59
RAB3A-204ENST00000515410 FLAD1Q8NFF5 587 aa18.73■□□□□ 0.59
RAB3A-204ENST00000515410 HOXC9P31274 260 aa18.72■□□□□ 0.59
RAB3A-204ENST00000515410 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
RAB3A-204ENST00000515410 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
RAB3A-204ENST00000515410 FBLN1P23142 703 aa18.71■□□□□ 0.59
RAB3A-204ENST00000515410 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
RAB3A-204ENST00000515410 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
RAB3A-204ENST00000515410 AMPHP49418 695 aa18.7■□□□□ 0.58
RAB3A-204ENST00000515410 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
RAB3A-204ENST00000515410 RTL1A6NKG5 1358 aa18.69■□□□□ 0.58
RAB3A-204ENST00000515410 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
RAB3A-204ENST00000515410 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
RAB3A-204ENST00000515410 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
RAB3A-204ENST00000515410 TOMM70O94826 608 aa18.68■□□□□ 0.58
RAB3A-204ENST00000515410 RRS1Q15050 365 aaKnown RBP18.67■□□□□ 0.58
RAB3A-204ENST00000515410 WWC3Q9ULE0 1092 aa18.67■□□□□ 0.58
RAB3A-204ENST00000515410 C5P01031 1676 aa18.66■□□□□ 0.58
RAB3A-204ENST00000515410 MEGF6O75095 1541 aa18.66■□□□□ 0.58
RAB3A-204ENST00000515410 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
RAB3A-204ENST00000515410 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
RAB3A-204ENST00000515410 INSRP06213 1382 aa18.64■□□□□ 0.57
RAB3A-204ENST00000515410 COL13A1Q5TAT6 717 aaPredicted RBP18.63■□□□□ 0.57
RAB3A-204ENST00000515410 POLR3GLQ9BT43 218 aa18.63■□□□□ 0.57
RAB3A-204ENST00000515410 PALLDQ8WX93 1383 aa18.63■□□□□ 0.57
RAB3A-204ENST00000515410 FLT4P35916 1363 aa18.62■□□□□ 0.57
RAB3A-204ENST00000515410 RGPD2P0DJD1 1756 aa18.62■□□□□ 0.57
RAB3A-204ENST00000515410 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 AMIGO3Q86WK7 504 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 AK7Q96M32 723 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 PANK3Q9H999 370 aa18.61■□□□□ 0.57
RAB3A-204ENST00000515410 SMG6Q86US8 1419 aaKnown RBP18.6■□□□□ 0.57
RAB3A-204ENST00000515410 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
RAB3A-204ENST00000515410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
RAB3A-204ENST00000515410 JMYQ8N9B5 988 aa18.59■□□□□ 0.57
RAB3A-204ENST00000515410 KLRG1Q96E93 195 aa18.59■□□□□ 0.57
RAB3A-204ENST00000515410 C4BP0C0L5 1744 aa18.59■□□□□ 0.57
RAB3A-204ENST00000515410 CAPN15O75808 1086 aa18.58■□□□□ 0.56
RAB3A-204ENST00000515410 PHF14O94880 888 aa18.58■□□□□ 0.56
RAB3A-204ENST00000515410 TAF1LQ8IZX4 1826 aa18.58■□□□□ 0.56
RAB3A-204ENST00000515410 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 TOGARAM1Q9Y4F4 1720 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 WASHC2AQ641Q2 1341 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 RBM46Q8TBY0 533 aaKnown RBP18.57■□□□□ 0.56
RAB3A-204ENST00000515410 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 NMRK2Q9NPI5 230 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
RAB3A-204ENST00000515410 SSFA2P28290 1259 aa18.56■□□□□ 0.56
RAB3A-204ENST00000515410 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
RAB3A-204ENST00000515410 SMARCC1Q92922 1105 aaPredicted RBP18.56■□□□□ 0.56
RAB3A-204ENST00000515410 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
RAB3A-204ENST00000515410 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
RAB3A-204ENST00000515410 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
RAB3A-204ENST00000515410 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
RAB3A-204ENST00000515410 PXDNLA1KZ92 1463 aa18.55■□□□□ 0.56
RAB3A-204ENST00000515410 PRELPP51888 382 aa18.55■□□□□ 0.56
RAB3A-204ENST00000515410 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
RAB3A-204ENST00000515410 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms