RNA–Protein interactions for RNA: ENST00000515257.6

CDH18-212, Transcript of cadherin 18, humanhuman

TSL 5

Gene CDH18, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-212ENST00000515257 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
CDH18-212ENST00000515257 PLSCR1O15162 318 aa13.03□□□□□ -0.32
CDH18-212ENST00000515257 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
CDH18-212ENST00000515257 TATP17735 454 aaPredicted RBP13.02□□□□□ -0.33
CDH18-212ENST00000515257 EIF4A2Q14240 407 aaKnown RBP13.02□□□□□ -0.33
CDH18-212ENST00000515257 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
CDH18-212ENST00000515257 EYA1Q99502 592 aa13.02□□□□□ -0.33
CDH18-212ENST00000515257 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
CDH18-212ENST00000515257 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
CDH18-212ENST00000515257 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
CDH18-212ENST00000515257 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
CDH18-212ENST00000515257 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
CDH18-212ENST00000515257 KCNQ2O43526 872 aa12.99□□□□□ -0.33
CDH18-212ENST00000515257 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
CDH18-212ENST00000515257 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
CDH18-212ENST00000515257 IGSF1Q8N6C5 1336 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH18-212ENST00000515257 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 RREB1Q92766 1687 aa12.98□□□□□ -0.33
CDH18-212ENST00000515257 MTHFSP49914 203 aa12.97□□□□□ -0.33
CDH18-212ENST00000515257 CYP27B1O15528 508 aa12.96□□□□□ -0.34
CDH18-212ENST00000515257 IL13P35225 146 aa12.96□□□□□ -0.34
CDH18-212ENST00000515257 PROM2Q8N271 834 aa12.96□□□□□ -0.34
CDH18-212ENST00000515257 SPG7Q9UQ90 795 aa12.96□□□□□ -0.34
CDH18-212ENST00000515257 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.34
CDH18-212ENST00000515257 PRIM1P49642 420 aaKnown RBP12.95□□□□□ -0.34
CDH18-212ENST00000515257 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
CDH18-212ENST00000515257 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
CDH18-212ENST00000515257 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
CDH18-212ENST00000515257 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
CDH18-212ENST00000515257 BTAF1O14981 1849 aa12.94□□□□□ -0.34
CDH18-212ENST00000515257 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
CDH18-212ENST00000515257 TXNRD1Q16881 649 aa12.93□□□□□ -0.34
CDH18-212ENST00000515257 KDRP35968 1356 aa12.93□□□□□ -0.34
CDH18-212ENST00000515257 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
CDH18-212ENST00000515257 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
CDH18-212ENST00000515257 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
CDH18-212ENST00000515257 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
CDH18-212ENST00000515257 PHKG2P15735 406 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
CDH18-212ENST00000515257 PLEKHO1Q53GL0 409 aaPredicted RBP12.91□□□□□ -0.34
CDH18-212ENST00000515257 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 AEBP1Q8IUX7 1158 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
CDH18-212ENST00000515257 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
CDH18-212ENST00000515257 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
CDH18-212ENST00000515257 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
CDH18-212ENST00000515257 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
CDH18-212ENST00000515257 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
CDH18-212ENST00000515257 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
CDH18-212ENST00000515257 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
CDH18-212ENST00000515257 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
CDH18-212ENST00000515257 CFAP53Q96M91 514 aa12.87□□□□□ -0.35
CDH18-212ENST00000515257 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
CDH18-212ENST00000515257 SLC15A2Q16348 729 aa12.86□□□□□ -0.35
CDH18-212ENST00000515257 PIGBQ92521 554 aa12.86□□□□□ -0.35
CDH18-212ENST00000515257 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
CDH18-212ENST00000515257 LY75O60449 1722 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 HMOX1P09601 288 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 HMGB2P26583 209 aaKnown RBP12.85□□□□□ -0.35
CDH18-212ENST00000515257 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
CDH18-212ENST00000515257 LRP5O75197 1615 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 ITGB4P16144 1822 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
CDH18-212ENST00000515257 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
CDH18-212ENST00000515257 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
CDH18-212ENST00000515257 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
CDH18-212ENST00000515257 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
CDH18-212ENST00000515257 CCNL1Q9UK58 526 aaPredicted RBP12.84□□□□□ -0.35
CDH18-212ENST00000515257 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
CDH18-212ENST00000515257 U2SURPO15042 1029 aaKnown RBP12.83□□□□□ -0.36
CDH18-212ENST00000515257 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
CDH18-212ENST00000515257 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
CDH18-212ENST00000515257 RALBP1Q15311 655 aa12.82□□□□□ -0.36
CDH18-212ENST00000515257 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
CDH18-212ENST00000515257 KCNQ4P56696 695 aa12.81□□□□□ -0.36
CDH18-212ENST00000515257 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
CDH18-212ENST00000515257 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
CDH18-212ENST00000515257 CASZ1Q86V15 1759 aa12.8□□□□□ -0.36
CDH18-212ENST00000515257 CABP4P57796 275 aa12.8□□□□□ -0.36
CDH18-212ENST00000515257 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
CDH18-212ENST00000515257 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
CDH18-212ENST00000515257 UTRNP46939 3433 aa12.8□□□□□ -0.36
CDH18-212ENST00000515257 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
CDH18-212ENST00000515257 SIK1P57059 783 aa12.79□□□□□ -0.36
CDH18-212ENST00000515257 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
CDH18-212ENST00000515257 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
CDH18-212ENST00000515257 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
CDH18-212ENST00000515257 FCHSD2O94868 740 aa12.78□□□□□ -0.36
CDH18-212ENST00000515257 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
CDH18-212ENST00000515257 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH18-212ENST00000515257 GOLGB1Q14789 3259 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms