RNA–Protein interactions for RNA: ENST00000515068.1

CSF1R-207, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-207ENST00000515068 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
CSF1R-207ENST00000515068 MYH16Q9H6N6 1097 aa16.25■□□□□ 0.19
CSF1R-207ENST00000515068 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
CSF1R-207ENST00000515068 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
CSF1R-207ENST00000515068 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
CSF1R-207ENST00000515068 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
CSF1R-207ENST00000515068 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
CSF1R-207ENST00000515068 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 NEFLP07196 543 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
CSF1R-207ENST00000515068 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 MAP3K5Q99683 1374 aa16.23■□□□□ 0.19
CSF1R-207ENST00000515068 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
CSF1R-207ENST00000515068 CHL1O00533 1208 aa16.22■□□□□ 0.19
CSF1R-207ENST00000515068 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
CSF1R-207ENST00000515068 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.19
CSF1R-207ENST00000515068 TSPYL6Q8N831 410 aa16.21■□□□□ 0.19
CSF1R-207ENST00000515068 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
CSF1R-207ENST00000515068 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
CSF1R-207ENST00000515068 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 HTATSF1O43719 755 aaKnown RBP16.2■□□□□ 0.18
CSF1R-207ENST00000515068 GNAI1P63096 354 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
CSF1R-207ENST00000515068 KDM3BQ7LBC6 1761 aa16.2■□□□□ 0.18
CSF1R-207ENST00000515068 SCN11AQ9UI33 1791 aa16.19■□□□□ 0.18
CSF1R-207ENST00000515068 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
CSF1R-207ENST00000515068 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
CSF1R-207ENST00000515068 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
CSF1R-207ENST00000515068 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
CSF1R-207ENST00000515068 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
CSF1R-207ENST00000515068 VAMP4O75379 141 aa16.18■□□□□ 0.18
CSF1R-207ENST00000515068 EXOC6Q8TAG9 804 aa16.18■□□□□ 0.18
CSF1R-207ENST00000515068 MIS18AQ9NYP9 233 aa16.18■□□□□ 0.18
CSF1R-207ENST00000515068 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
CSF1R-207ENST00000515068 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
CSF1R-207ENST00000515068 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
CSF1R-207ENST00000515068 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
CSF1R-207ENST00000515068 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
CSF1R-207ENST00000515068 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
CSF1R-207ENST00000515068 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
CSF1R-207ENST00000515068 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
CSF1R-207ENST00000515068 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
CSF1R-207ENST00000515068 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
CSF1R-207ENST00000515068 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
CSF1R-207ENST00000515068 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
CSF1R-207ENST00000515068 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
CSF1R-207ENST00000515068 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
CSF1R-207ENST00000515068 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
CSF1R-207ENST00000515068 PLEKHG2Q9H7P9 1386 aa16.14■□□□□ 0.17
CSF1R-207ENST00000515068 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
CSF1R-207ENST00000515068 AMOTQ4VCS5 1084 aa16.14■□□□□ 0.17
CSF1R-207ENST00000515068 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
CSF1R-207ENST00000515068 DISP2A7MBM2 1401 aa16.13■□□□□ 0.17
CSF1R-207ENST00000515068 CYP27B1O15528 508 aa16.13■□□□□ 0.17
CSF1R-207ENST00000515068 MPRIPQ6WCQ1 1025 aa16.13■□□□□ 0.17
CSF1R-207ENST00000515068 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
CSF1R-207ENST00000515068 BTG4Q9NY30 223 aa16.13■□□□□ 0.17
CSF1R-207ENST00000515068 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
CSF1R-207ENST00000515068 RLBP1P12271 317 aa16.12■□□□□ 0.17
CSF1R-207ENST00000515068 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
CSF1R-207ENST00000515068 STRN4Q9NRL3 753 aa16.12■□□□□ 0.17
CSF1R-207ENST00000515068 PPP4R2Q9NY27 417 aa16.12■□□□□ 0.17
CSF1R-207ENST00000515068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.12■□□□□ 0.17
CSF1R-207ENST00000515068 NWD2Q9ULI1 1742 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 MRC1P22897 1456 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 KCNQ3O43525 872 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 PHKG2P15735 406 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
CSF1R-207ENST00000515068 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
CSF1R-207ENST00000515068 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 LRP6O75581 1613 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
CSF1R-207ENST00000515068 SLIT2O94813 1529 aa16.1■□□□□ 0.17
CSF1R-207ENST00000515068 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
CSF1R-207ENST00000515068 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
CSF1R-207ENST00000515068 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
CSF1R-207ENST00000515068 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
CSF1R-207ENST00000515068 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
CSF1R-207ENST00000515068 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
CSF1R-207ENST00000515068 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
CSF1R-207ENST00000515068 GLI3P10071 1580 aa16.09■□□□□ 0.17
CSF1R-207ENST00000515068 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
CSF1R-207ENST00000515068 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
CSF1R-207ENST00000515068 NUTM2BA6NNL0 878 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-207ENST00000515068 NUTM2EB1AL46 878 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-207ENST00000515068 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 POTEAQ6S8J7 498 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 NUTM2AQ8IVF1 878 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-207ENST00000515068 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-207ENST00000515068 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 JCADQ9P266 1359 aa16.07■□□□□ 0.16
CSF1R-207ENST00000515068 RGS12O14924 1447 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms