RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
SMAD5-210ENST00000515005 ERBB3P21860 1342 aa17.38■□□□□ 0.37
SMAD5-210ENST00000515005 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
SMAD5-210ENST00000515005 NSD2O96028 1365 aa17.37■□□□□ 0.37
SMAD5-210ENST00000515005 HSPA1AP0DMV8 641 aaKnown RBP17.36■□□□□ 0.37
SMAD5-210ENST00000515005 HSPA1BP0DMV9 641 aaKnown RBP17.36■□□□□ 0.37
SMAD5-210ENST00000515005 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
SMAD5-210ENST00000515005 FSTL1Q12841 308 aa17.35■□□□□ 0.37
SMAD5-210ENST00000515005 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
SMAD5-210ENST00000515005 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
SMAD5-210ENST00000515005 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
SMAD5-210ENST00000515005 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
SMAD5-210ENST00000515005 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
SMAD5-210ENST00000515005 C5P01031 1676 aa17.32■□□□□ 0.36
SMAD5-210ENST00000515005 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
SMAD5-210ENST00000515005 USP54Q70EL1 1684 aa17.3■□□□□ 0.36
SMAD5-210ENST00000515005 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
SMAD5-210ENST00000515005 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
SMAD5-210ENST00000515005 LTN1O94822 1766 aa17.28■□□□□ 0.36
SMAD5-210ENST00000515005 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
SMAD5-210ENST00000515005 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
SMAD5-210ENST00000515005 USP47Q96K76 1375 aa17.28■□□□□ 0.36
SMAD5-210ENST00000515005 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
SMAD5-210ENST00000515005 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
SMAD5-210ENST00000515005 ARHGAP27Q6ZUM4 889 aa17.27■□□□□ 0.36
SMAD5-210ENST00000515005 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
SMAD5-210ENST00000515005 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
SMAD5-210ENST00000515005 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
SMAD5-210ENST00000515005 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
SMAD5-210ENST00000515005 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
SMAD5-210ENST00000515005 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
SMAD5-210ENST00000515005 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
SMAD5-210ENST00000515005 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
SMAD5-210ENST00000515005 PHF14O94880 888 aa17.23■□□□□ 0.35
SMAD5-210ENST00000515005 C9orf131Q5VYM1 1079 aa17.23■□□□□ 0.35
SMAD5-210ENST00000515005 RRAGCQ9HB90 399 aa17.23■□□□□ 0.35
SMAD5-210ENST00000515005 KIAA1210Q9ULL0 1709 aa17.23■□□□□ 0.35
SMAD5-210ENST00000515005 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SMAD5-210ENST00000515005 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
SMAD5-210ENST00000515005 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
SMAD5-210ENST00000515005 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
SMAD5-210ENST00000515005 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
SMAD5-210ENST00000515005 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.34
SMAD5-210ENST00000515005 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
SMAD5-210ENST00000515005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
SMAD5-210ENST00000515005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMAD5-210ENST00000515005 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
SMAD5-210ENST00000515005 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-210ENST00000515005 AK7Q96M32 723 aa17.2■□□□□ 0.34
SMAD5-210ENST00000515005 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
SMAD5-210ENST00000515005 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
SMAD5-210ENST00000515005 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
SMAD5-210ENST00000515005 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
SMAD5-210ENST00000515005 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
SMAD5-210ENST00000515005 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
SMAD5-210ENST00000515005 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
SMAD5-210ENST00000515005 FCHSD2O94868 740 aa17.17■□□□□ 0.34
SMAD5-210ENST00000515005 TGFB2P61812 414 aa17.17■□□□□ 0.34
SMAD5-210ENST00000515005 NME9Q86XW9 330 aa17.17■□□□□ 0.34
SMAD5-210ENST00000515005 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
SMAD5-210ENST00000515005 BRCA1P38398 1863 aaKnown RBP17.16■□□□□ 0.34
SMAD5-210ENST00000515005 MMP10P09238 476 aa17.16■□□□□ 0.34
SMAD5-210ENST00000515005 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
SMAD5-210ENST00000515005 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
SMAD5-210ENST00000515005 DPEP1P16444 411 aa17.15■□□□□ 0.34
SMAD5-210ENST00000515005 MON2Q7Z3U7 1717 aa17.15■□□□□ 0.34
SMAD5-210ENST00000515005 MEGF6O75095 1541 aa17.15■□□□□ 0.34
SMAD5-210ENST00000515005 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
SMAD5-210ENST00000515005 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
SMAD5-210ENST00000515005 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
SMAD5-210ENST00000515005 FOXN1O15353 648 aa17.13■□□□□ 0.33
SMAD5-210ENST00000515005 SSFA2P28290 1259 aa17.13■□□□□ 0.33
SMAD5-210ENST00000515005 IP6K1Q92551 441 aa17.13■□□□□ 0.33
SMAD5-210ENST00000515005 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
SMAD5-210ENST00000515005 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
SMAD5-210ENST00000515005 SBF1O95248 1867 aa17.12■□□□□ 0.33
SMAD5-210ENST00000515005 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
SMAD5-210ENST00000515005 KCNA3P22001 575 aa17.09■□□□□ 0.33
SMAD5-210ENST00000515005 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
SMAD5-210ENST00000515005 SBNO2Q9Y2G9 1366 aa17.09■□□□□ 0.33
SMAD5-210ENST00000515005 MKRN1Q9UHC7 482 aaKnown RBP17.08■□□□□ 0.32
SMAD5-210ENST00000515005 ITGB4P16144 1822 aa17.07■□□□□ 0.32
SMAD5-210ENST00000515005 GNPATO15228 680 aa17.07■□□□□ 0.32
SMAD5-210ENST00000515005 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
SMAD5-210ENST00000515005 DCAF5Q96JK2 942 aa17.07■□□□□ 0.32
SMAD5-210ENST00000515005 MAP2P11137 1827 aaKnown RBP17.07■□□□□ 0.32
SMAD5-210ENST00000515005 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
SMAD5-210ENST00000515005 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
SMAD5-210ENST00000515005 ABHD8Q96I13 439 aa17.05■□□□□ 0.32
SMAD5-210ENST00000515005 CCDC87Q9NVE4 849 aa17.05■□□□□ 0.32
SMAD5-210ENST00000515005 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
SMAD5-210ENST00000515005 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
SMAD5-210ENST00000515005 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 HOXC9P31274 260 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 SIK1P57059 783 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 MLLT1Q03111 559 aaPredicted RBP17.03■□□□□ 0.32
SMAD5-210ENST00000515005 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
SMAD5-210ENST00000515005 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
SMAD5-210ENST00000515005 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms