RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 M0R2N6 131 aa12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 TLL1O43897 1013 aa12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 ZNF16P17020 682 aaPredicted RBP12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 C1QTNF2Q9BXJ5 285 aa12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 CDV3Q9UKY7 258 aaKnown RBP12.45□□□□□ -0.42
LDHBP3-201ENST00000514909 USP4Q13107 963 aa12.44□□□□□ -0.42
LDHBP3-201ENST00000514909 NPAS4Q8IUM7 802 aa12.44□□□□□ -0.42
LDHBP3-201ENST00000514909 SLC10A4Q96EP9 437 aa12.44□□□□□ -0.42
LDHBP3-201ENST00000514909 BCL2L13Q9BXK5 485 aa12.44□□□□□ -0.42
LDHBP3-201ENST00000514909 KIAA1522Q9P206 1035 aaPredicted RBP12.44□□□□□ -0.42
LDHBP3-201ENST00000514909 ICMTO60725 284 aa12.43□□□□□ -0.42
LDHBP3-201ENST00000514909 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
LDHBP3-201ENST00000514909 ZNF511Q8NB15 262 aa12.43□□□□□ -0.42
LDHBP3-201ENST00000514909 MRRFQ96E11 262 aaKnown RBP12.43□□□□□ -0.42
LDHBP3-201ENST00000514909 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
LDHBP3-201ENST00000514909 SCNN1AP37088 669 aa12.42□□□□□ -0.42
LDHBP3-201ENST00000514909 SLC6A16Q9GZN6 736 aa12.42□□□□□ -0.42
LDHBP3-201ENST00000514909 PSME1Q06323 249 aa12.41□□□□□ -0.42
LDHBP3-201ENST00000514909 BAP1Q92560 729 aa12.41□□□□□ -0.42
LDHBP3-201ENST00000514909 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
LDHBP3-201ENST00000514909 ANKRD33BA6NCL7 494 aa12.4□□□□□ -0.42
LDHBP3-201ENST00000514909 C4orf48Q5BLP8 95 aa12.4□□□□□ -0.42
LDHBP3-201ENST00000514909 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LDHBP3-201ENST00000514909 H3BRB1 525 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 C21orf2O43822 256 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 WEE1P30291 646 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 AGERQ15109 404 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 FOXJ1Q92949 421 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 MTRQ99707 1265 aa12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
LDHBP3-201ENST00000514909 PTCD1O75127 700 aaKnown RBP12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 ABL1P00519 1130 aa12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 GIPC2Q8TF65 315 aa12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 COL26A1Q96A83 441 aa12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
LDHBP3-201ENST00000514909 VAMP1P23763 118 aa12.37□□□□□ -0.43
LDHBP3-201ENST00000514909 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
LDHBP3-201ENST00000514909 ZNF211Q13398 564 aaPredicted RBP12.36□□□□□ -0.43
LDHBP3-201ENST00000514909 ZNF326Q5BKZ1 582 aaKnown RBP12.36□□□□□ -0.43
LDHBP3-201ENST00000514909 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 COL19A1Q14993 1142 aa12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 GTF3C2Q8WUA4 911 aaPredicted RBP12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 ASB16Q96NS5 453 aa12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
LDHBP3-201ENST00000514909 ECM1Q16610 540 aa12.34□□□□□ -0.43
LDHBP3-201ENST00000514909 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
LDHBP3-201ENST00000514909 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
LDHBP3-201ENST00000514909 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
LDHBP3-201ENST00000514909 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
LDHBP3-201ENST00000514909 FBXO33Q7Z6M2 555 aa12.32□□□□□ -0.44
LDHBP3-201ENST00000514909 DNMT3AQ9Y6K1 912 aaPredicted RBP12.32□□□□□ -0.44
LDHBP3-201ENST00000514909 IGFBP4P22692 258 aa12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 Q6ZNB5 142 aa12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 SEPT3Q9UH03 358 aa12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 FCF1Q9Y324 198 aaKnown RBP12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 MAP4K5Q9Y4K4 846 aa12.31□□□□□ -0.44
LDHBP3-201ENST00000514909 LCE2BO14633 110 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 FOXO3O43524 673 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 MAPK1P28482 360 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 SH3BP2P78314 561 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 ANO2Q9NQ90 1003 aa12.3□□□□□ -0.44
LDHBP3-201ENST00000514909 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
LDHBP3-201ENST00000514909 TCF3P15923 654 aa12.29□□□□□ -0.44
LDHBP3-201ENST00000514909 TRIM52Q96A61 297 aa12.29□□□□□ -0.44
LDHBP3-201ENST00000514909 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 NPR3P17342 541 aa12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 HELQQ8TDG4 1101 aa12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 KCTD15Q96SI1 283 aaPredicted RBP12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
LDHBP3-201ENST00000514909 S1PR4O95977 384 aa12.27□□□□□ -0.45
LDHBP3-201ENST00000514909 RGL4Q8IZJ4 473 aa12.27□□□□□ -0.45
LDHBP3-201ENST00000514909 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.45
LDHBP3-201ENST00000514909 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
LDHBP3-201ENST00000514909 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
LDHBP3-201ENST00000514909 INTS6LQ5JSJ4 861 aaKnown RBP12.25□□□□□ -0.45
LDHBP3-201ENST00000514909 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
LDHBP3-201ENST00000514909 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
LDHBP3-201ENST00000514909 TMEM229AB2RXF0 380 aa12.24□□□□□ -0.45
LDHBP3-201ENST00000514909 BACH1O14867 736 aa12.24□□□□□ -0.45
LDHBP3-201ENST00000514909 VARSP26640 1264 aaKnown RBP12.24□□□□□ -0.45
LDHBP3-201ENST00000514909 PURBQ96QR8 312 aaKnown RBP12.24□□□□□ -0.45
LDHBP3-201ENST00000514909 BCL11AQ9H165 835 aa12.24□□□□□ -0.45
LDHBP3-201ENST00000514909 FAM13AO94988 1023 aa12.23□□□□□ -0.45
LDHBP3-201ENST00000514909 SCTRP47872 440 aa12.23□□□□□ -0.45
LDHBP3-201ENST00000514909 LAPTM4AQ15012 233 aa12.23□□□□□ -0.45
LDHBP3-201ENST00000514909 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
LDHBP3-201ENST00000514909 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
LDHBP3-201ENST00000514909 LGR5O75473 907 aa12.22□□□□□ -0.45
LDHBP3-201ENST00000514909 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
LDHBP3-201ENST00000514909 RBCK1Q9BYM8 510 aa12.22□□□□□ -0.45
LDHBP3-201ENST00000514909 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms