RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-211ENST00000514893 KDF1Q8NAX2 398 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-211ENST00000514893 DNMT3AQ9Y6K1 912 aaPredicted RBP10.1□□□□□ -0.79
NEDD4-211ENST00000514893 PRICKLE2Q7Z3G6 844 aa10.09□□□□□ -0.79
NEDD4-211ENST00000514893 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
NEDD4-211ENST00000514893 FOXK2Q01167 660 aa10.08□□□□□ -0.8
NEDD4-211ENST00000514893 RFC5P40937 340 aa10.07□□□□□ -0.8
NEDD4-211ENST00000514893 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
NEDD4-211ENST00000514893 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
NEDD4-211ENST00000514893 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
NEDD4-211ENST00000514893 ATP5J2-PTCD1G3V325 749 aa10.06□□□□□ -0.8
NEDD4-211ENST00000514893 GPC1P35052 558 aa10.06□□□□□ -0.8
NEDD4-211ENST00000514893 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
NEDD4-211ENST00000514893 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
NEDD4-211ENST00000514893 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
NEDD4-211ENST00000514893 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
NEDD4-211ENST00000514893 H7C1W4 665 aa10.04□□□□□ -0.8
NEDD4-211ENST00000514893 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
NEDD4-211ENST00000514893 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
NEDD4-211ENST00000514893 MEN1O00255 615 aa10.03□□□□□ -0.8
NEDD4-211ENST00000514893 GIGYF1O75420 1035 aaPredicted RBP10.03□□□□□ -0.8
NEDD4-211ENST00000514893 RHOQP17081 205 aa10.03□□□□□ -0.8
NEDD4-211ENST00000514893 MCCD1P59942 119 aaPredicted RBP10.03□□□□□ -0.8
NEDD4-211ENST00000514893 GOPCQ9HD26 462 aa10.03□□□□□ -0.8
NEDD4-211ENST00000514893 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
NEDD4-211ENST00000514893 GAS6Q14393 721 aa10.02□□□□□ -0.81
NEDD4-211ENST00000514893 RIPOR1Q6ZS17 1223 aa10.02□□□□□ -0.81
NEDD4-211ENST00000514893 PCMTD1Q96MG8 357 aaPredicted RBP10.02□□□□□ -0.81
NEDD4-211ENST00000514893 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
NEDD4-211ENST00000514893 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
NEDD4-211ENST00000514893 A0A1W2PRU2 124 aa10.01□□□□□ -0.81
NEDD4-211ENST00000514893 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
NEDD4-211ENST00000514893 BEND7Q8N7W2 519 aaPredicted RBP10.01□□□□□ -0.81
NEDD4-211ENST00000514893 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
NEDD4-211ENST00000514893 TRIM34Q9BYJ4 488 aa10.01□□□□□ -0.81
NEDD4-211ENST00000514893 ESF1Q9H501 851 aaKnown RBP10.01□□□□□ -0.81
NEDD4-211ENST00000514893 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
NEDD4-211ENST00000514893 DBN1Q16643 649 aa10□□□□□ -0.81
NEDD4-211ENST00000514893 SLC27A3Q5K4L6 730 aa10□□□□□ -0.81
NEDD4-211ENST00000514893 ZNF837Q96EG3 531 aaPredicted RBP10□□□□□ -0.81
NEDD4-211ENST00000514893 TRERF1Q96PN7 1200 aa10□□□□□ -0.81
NEDD4-211ENST00000514893 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
NEDD4-211ENST00000514893 POU4F2Q12837 409 aa9.98□□□□□ -0.81
NEDD4-211ENST00000514893 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
NEDD4-211ENST00000514893 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
NEDD4-211ENST00000514893 IGF1RP08069 1367 aa9.98□□□□□ -0.81
NEDD4-211ENST00000514893 BCRP11274 1271 aa9.97□□□□□ -0.81
NEDD4-211ENST00000514893 ERVK-9P63128 1117 aa9.97□□□□□ -0.81
NEDD4-211ENST00000514893 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
NEDD4-211ENST00000514893 GAS2L1Q99501 681 aaPredicted RBP9.97□□□□□ -0.81
NEDD4-211ENST00000514893 CYP2U1Q7Z449 544 aa9.96□□□□□ -0.82
NEDD4-211ENST00000514893 PODNQ7Z5L7 613 aa9.96□□□□□ -0.82
NEDD4-211ENST00000514893 GTPBP3Q969Y2 492 aaKnown RBP9.96□□□□□ -0.82
NEDD4-211ENST00000514893 GRIP2Q9C0E4 1043 aa9.96□□□□□ -0.82
NEDD4-211ENST00000514893 LRRC4BQ9NT99 713 aa9.96□□□□□ -0.82
NEDD4-211ENST00000514893 ZNF330Q9Y3S2 320 aaPredicted RBP9.96□□□□□ -0.82
NEDD4-211ENST00000514893 GPR25O00155 361 aa9.95□□□□□ -0.82
NEDD4-211ENST00000514893 FBXO45P0C2W1 286 aa9.95□□□□□ -0.82
NEDD4-211ENST00000514893 CLN3Q13286 438 aa9.95□□□□□ -0.82
NEDD4-211ENST00000514893 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
NEDD4-211ENST00000514893 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
NEDD4-211ENST00000514893 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
NEDD4-211ENST00000514893 SPATA31C2B4DYI2 1134 aa9.93□□□□□ -0.82
NEDD4-211ENST00000514893 MX2P20592 715 aa9.93□□□□□ -0.82
NEDD4-211ENST00000514893 TIMMDC1Q9NPL8 285 aa9.93□□□□□ -0.82
NEDD4-211ENST00000514893 MSTNO14793 375 aa9.92□□□□□ -0.82
NEDD4-211ENST00000514893 F11P03951 625 aa9.92□□□□□ -0.82
NEDD4-211ENST00000514893 NR1H3Q13133 447 aa9.92□□□□□ -0.82
NEDD4-211ENST00000514893 GJD4Q96KN9 370 aaPredicted RBP9.92□□□□□ -0.82
NEDD4-211ENST00000514893 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
NEDD4-211ENST00000514893 ACDQ96AP0 544 aa9.91□□□□□ -0.82
NEDD4-211ENST00000514893 DCAF5Q96JK2 942 aa9.91□□□□□ -0.82
NEDD4-211ENST00000514893 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
NEDD4-211ENST00000514893 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
NEDD4-211ENST00000514893 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
NEDD4-211ENST00000514893 GNRH1P01148 92 aa9.89□□□□□ -0.83
NEDD4-211ENST00000514893 MAP2K3P46734 347 aa9.89□□□□□ -0.83
NEDD4-211ENST00000514893 CFHR5Q9BXR6 569 aa9.89□□□□□ -0.83
NEDD4-211ENST00000514893 PLA2G4EQ3MJ16 856 aa9.88□□□□□ -0.83
NEDD4-211ENST00000514893 TRAK2O60296 914 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 SCTRP47872 440 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 BCANQ96GW7 911 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 OSBPL3Q9H4L5 887 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 ARHGEF10LQ9HCE6 1279 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 PHF24Q9UPV7 400 aa9.87□□□□□ -0.83
NEDD4-211ENST00000514893 OIP5O43482 229 aa9.86□□□□□ -0.83
NEDD4-211ENST00000514893 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
NEDD4-211ENST00000514893 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
NEDD4-211ENST00000514893 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
NEDD4-211ENST00000514893 APBB1O00213 710 aa9.85□□□□□ -0.83
NEDD4-211ENST00000514893 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
NEDD4-211ENST00000514893 CENPCQ03188 943 aa9.85□□□□□ -0.83
NEDD4-211ENST00000514893 CNKSR1Q969H4 720 aa9.85□□□□□ -0.83
NEDD4-211ENST00000514893 SOCS7O14512 581 aa9.84□□□□□ -0.83
NEDD4-211ENST00000514893 SPOCK3Q9BQ16 436 aa9.84□□□□□ -0.83
NEDD4-211ENST00000514893 OXCT2Q9BYC2 517 aaPredicted RBP9.84□□□□□ -0.83
NEDD4-211ENST00000514893 A0A1B0GTH6 734 aa9.82□□□□□ -0.84
NEDD4-211ENST00000514893 LBRQ14739 615 aaKnown RBP9.82□□□□□ -0.84
NEDD4-211ENST00000514893 GNASQ5JWF2 1037 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms