RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
SMAD5-209ENST00000514777 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
SMAD5-209ENST00000514777 FAM208AQ9UK61 1670 aaKnown RBP18.68■□□□□ 0.58
SMAD5-209ENST00000514777 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
SMAD5-209ENST00000514777 EDC4Q6P2E9 1401 aaKnown RBP18.67■□□□□ 0.58
SMAD5-209ENST00000514777 HDGFL2Q7Z4V5 671 aaPredicted RBP18.67■□□□□ 0.58
SMAD5-209ENST00000514777 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
SMAD5-209ENST00000514777 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
SMAD5-209ENST00000514777 A0A1W2PP64 1363 aa18.66■□□□□ 0.58
SMAD5-209ENST00000514777 FBLN1P23142 703 aa18.65■□□□□ 0.58
SMAD5-209ENST00000514777 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
SMAD5-209ENST00000514777 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
SMAD5-209ENST00000514777 HOXC9P31274 260 aa18.62■□□□□ 0.57
SMAD5-209ENST00000514777 ZCRB1Q8TBF4 217 aaKnown RBP18.62■□□□□ 0.57
SMAD5-209ENST00000514777 MAP3K19Q56UN5 1328 aa18.62■□□□□ 0.57
SMAD5-209ENST00000514777 MEGF6O75095 1541 aa18.61■□□□□ 0.57
SMAD5-209ENST00000514777 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
SMAD5-209ENST00000514777 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
SMAD5-209ENST00000514777 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
SMAD5-209ENST00000514777 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
SMAD5-209ENST00000514777 MSH5O43196 834 aa18.59■□□□□ 0.57
SMAD5-209ENST00000514777 MSL1Q68DK7 614 aa18.59■□□□□ 0.57
SMAD5-209ENST00000514777 C5P01031 1676 aa18.58■□□□□ 0.57
SMAD5-209ENST00000514777 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
SMAD5-209ENST00000514777 NBPF6Q5VWK0 638 aa18.57■□□□□ 0.56
SMAD5-209ENST00000514777 NBPF4Q96M43 638 aa18.57■□□□□ 0.56
SMAD5-209ENST00000514777 USP47Q96K76 1375 aa18.56■□□□□ 0.56
SMAD5-209ENST00000514777 AMPHP49418 695 aa18.56■□□□□ 0.56
SMAD5-209ENST00000514777 COG3Q96JB2 828 aa18.56■□□□□ 0.56
SMAD5-209ENST00000514777 CD2APQ9Y5K6 639 aa18.55■□□□□ 0.56
SMAD5-209ENST00000514777 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
SMAD5-209ENST00000514777 ADCY9O60503 1353 aa18.54■□□□□ 0.56
SMAD5-209ENST00000514777 ITGB4P16144 1822 aa18.53■□□□□ 0.56
SMAD5-209ENST00000514777 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
SMAD5-209ENST00000514777 TESK2Q96S53 571 aa18.53■□□□□ 0.56
SMAD5-209ENST00000514777 RRS1Q15050 365 aaKnown RBP18.52■□□□□ 0.56
SMAD5-209ENST00000514777 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.55
SMAD5-209ENST00000514777 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
SMAD5-209ENST00000514777 GPBP1L1Q9HC44 474 aaPredicted RBP18.51■□□□□ 0.55
SMAD5-209ENST00000514777 UBR3Q6ZT12 1888 aa18.51■□□□□ 0.55
SMAD5-209ENST00000514777 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
SMAD5-209ENST00000514777 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
SMAD5-209ENST00000514777 FYB1O15117 783 aa18.49■□□□□ 0.55
SMAD5-209ENST00000514777 HSPA6P17066 643 aa18.49■□□□□ 0.55
SMAD5-209ENST00000514777 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
SMAD5-209ENST00000514777 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SMAD5-209ENST00000514777 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
SMAD5-209ENST00000514777 CYP27B1O15528 508 aa18.48■□□□□ 0.55
SMAD5-209ENST00000514777 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
SMAD5-209ENST00000514777 ZNF526Q8TF50 670 aaPredicted RBP18.48■□□□□ 0.55
SMAD5-209ENST00000514777 RAPGEF4Q8WZA2 1011 aa18.48■□□□□ 0.55
SMAD5-209ENST00000514777 MAP2P11137 1827 aaKnown RBP18.47■□□□□ 0.55
SMAD5-209ENST00000514777 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
SMAD5-209ENST00000514777 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
SMAD5-209ENST00000514777 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
SMAD5-209ENST00000514777 HSP90AB2PQ58FF8 381 aa18.46■□□□□ 0.55
SMAD5-209ENST00000514777 WWC3Q9ULE0 1092 aa18.46■□□□□ 0.55
SMAD5-209ENST00000514777 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
SMAD5-209ENST00000514777 PCDH11XQ9BZA7 1347 aa18.45■□□□□ 0.54
SMAD5-209ENST00000514777 PCDH11YQ9BZA8 1340 aa18.45■□□□□ 0.54
SMAD5-209ENST00000514777 KIF3CO14782 793 aa18.44■□□□□ 0.54
SMAD5-209ENST00000514777 INSRP06213 1382 aa18.43■□□□□ 0.54
SMAD5-209ENST00000514777 PIGBQ92521 554 aa18.43■□□□□ 0.54
SMAD5-209ENST00000514777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
SMAD5-209ENST00000514777 PHF14O94880 888 aa18.42■□□□□ 0.54
SMAD5-209ENST00000514777 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
SMAD5-209ENST00000514777 AK7Q96M32 723 aa18.42■□□□□ 0.54
SMAD5-209ENST00000514777 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
SMAD5-209ENST00000514777 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
SMAD5-209ENST00000514777 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
SMAD5-209ENST00000514777 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
SMAD5-209ENST00000514777 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
SMAD5-209ENST00000514777 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.54
SMAD5-209ENST00000514777 KIAA1551Q9HCM1 1747 aa18.39■□□□□ 0.53
SMAD5-209ENST00000514777 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.53
SMAD5-209ENST00000514777 SSFA2P28290 1259 aa18.38■□□□□ 0.53
SMAD5-209ENST00000514777 FLT4P35916 1363 aa18.38■□□□□ 0.53
SMAD5-209ENST00000514777 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
SMAD5-209ENST00000514777 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
SMAD5-209ENST00000514777 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
SMAD5-209ENST00000514777 SIK1P57059 783 aa18.37■□□□□ 0.53
SMAD5-209ENST00000514777 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
SMAD5-209ENST00000514777 NCAPD2Q15021 1401 aa18.37■□□□□ 0.53
SMAD5-209ENST00000514777 SLC24A1O60721 1099 aa18.36■□□□□ 0.53
SMAD5-209ENST00000514777 ITPK1Q13572 414 aa18.36■□□□□ 0.53
SMAD5-209ENST00000514777 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
SMAD5-209ENST00000514777 ASAP1Q9ULH1 1129 aa18.36■□□□□ 0.53
SMAD5-209ENST00000514777 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
SMAD5-209ENST00000514777 NSD3Q9BZ95 1437 aa18.34■□□□□ 0.53
SMAD5-209ENST00000514777 DNAJC5GQ8N7S2 189 aa18.34■□□□□ 0.53
SMAD5-209ENST00000514777 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
SMAD5-209ENST00000514777 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
SMAD5-209ENST00000514777 GNPATO15228 680 aa18.32■□□□□ 0.52
SMAD5-209ENST00000514777 MMP10P09238 476 aa18.32■□□□□ 0.52
SMAD5-209ENST00000514777 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
SMAD5-209ENST00000514777 TMF1P82094 1093 aa18.31■□□□□ 0.52
SMAD5-209ENST00000514777 ATG3Q9NT62 314 aa18.31■□□□□ 0.52
SMAD5-209ENST00000514777 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
SMAD5-209ENST00000514777 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
SMAD5-209ENST00000514777 ANKRD26Q9UPS8 1709 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms