RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 PKD1L3Q7Z443 1732 aa25.77■■□□□ 1.72
SSBP2-218ENST00000514493 TRMT2AQ8IZ69 625 aaKnown RBP25.77■■□□□ 1.72
SSBP2-218ENST00000514493 IL16Q14005 1332 aa25.75■■□□□ 1.71
SSBP2-218ENST00000514493 MEGF6O75095 1541 aa25.73■■□□□ 1.71
SSBP2-218ENST00000514493 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
SSBP2-218ENST00000514493 MAP3K5Q99683 1374 aa25.71■■□□□ 1.71
SSBP2-218ENST00000514493 CALD1Q05682 793 aaKnown RBP25.71■■□□□ 1.71
SSBP2-218ENST00000514493 BTG4Q9NY30 223 aa25.71■■□□□ 1.71
SSBP2-218ENST00000514493 CRB1P82279 1406 aa25.71■■□□□ 1.71
SSBP2-218ENST00000514493 MEX3CQ5U5Q3 659 aaKnown RBP25.7■■□□□ 1.7
SSBP2-218ENST00000514493 C8orf37Q96NL8 207 aa25.7■■□□□ 1.7
SSBP2-218ENST00000514493 AMOTQ4VCS5 1084 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 TOM1L2Q6ZVM7 507 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 MYH16Q9H6N6 1097 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 STRN4Q9NRL3 753 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 FKBP8Q14318 412 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 PLEKHO1Q53GL0 409 aaPredicted RBP25.69■■□□□ 1.7
SSBP2-218ENST00000514493 RAPGEF4Q8WZA2 1011 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 CARD10Q9BWT7 1032 aa25.69■■□□□ 1.7
SSBP2-218ENST00000514493 EVA1CP58658 441 aa25.68■■□□□ 1.7
SSBP2-218ENST00000514493 THUMPD2Q9BTF0 503 aaKnown RBP25.68■■□□□ 1.7
SSBP2-218ENST00000514493 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
SSBP2-218ENST00000514493 LARP1Q6PKG0 1096 aaKnown RBP25.67■■□□□ 1.7
SSBP2-218ENST00000514493 OVOS2A0A0G2JMS6 1433 aa25.67■■□□□ 1.7
SSBP2-218ENST00000514493 SLIT2O94813 1529 aa25.67■■□□□ 1.7
SSBP2-218ENST00000514493 ADAMTS7Q9UKP4 1686 aa25.67■■□□□ 1.7
SSBP2-218ENST00000514493 RNF123Q5XPI4 1314 aa25.66■■□□□ 1.7
SSBP2-218ENST00000514493 GNAT3A8MTJ3 354 aa25.66■■□□□ 1.7
SSBP2-218ENST00000514493 TATP17735 454 aaPredicted RBP25.66■■□□□ 1.7
SSBP2-218ENST00000514493 DCTN1Q14203 1278 aa25.66■■□□□ 1.7
SSBP2-218ENST00000514493 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
SSBP2-218ENST00000514493 RCAN3Q9UKA8 241 aa25.66■■□□□ 1.7
SSBP2-218ENST00000514493 SHANK3Q9BYB0 1731 aa25.65■■□□□ 1.7
SSBP2-218ENST00000514493 RTF1Q92541 710 aaKnown RBP25.65■■□□□ 1.7
SSBP2-218ENST00000514493 FANCIQ9NVI1 1328 aa25.65■■□□□ 1.7
SSBP2-218ENST00000514493 MCM10Q7L590 875 aa25.64■■□□□ 1.7
SSBP2-218ENST00000514493 NGLY1Q96IV0 654 aa25.64■■□□□ 1.7
SSBP2-218ENST00000514493 IFT57Q9NWB7 429 aa25.64■■□□□ 1.7
SSBP2-218ENST00000514493 ZNF530Q6P9A1 599 aaPredicted RBP25.64■■□□□ 1.69
SSBP2-218ENST00000514493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.63■■□□□ 1.69
SSBP2-218ENST00000514493 SCN11AQ9UI33 1791 aa25.63■■□□□ 1.69
SSBP2-218ENST00000514493 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.63■■□□□ 1.69
SSBP2-218ENST00000514493 ZNF853P0CG23 659 aa25.61■■□□□ 1.69
SSBP2-218ENST00000514493 AKAP4Q5JQC9 854 aa25.61■■□□□ 1.69
SSBP2-218ENST00000514493 GNAI1P63096 354 aa25.61■■□□□ 1.69
SSBP2-218ENST00000514493 TSR2Q969E8 191 aaKnown RBP25.61■■□□□ 1.69
SSBP2-218ENST00000514493 AFF2P51816 1311 aa25.6■■□□□ 1.69
SSBP2-218ENST00000514493 SIPA1L3O60292 1781 aaPredicted RBP25.6■■□□□ 1.69
SSBP2-218ENST00000514493 CFAP44Q96MT7 982 aa25.59■■□□□ 1.69
SSBP2-218ENST00000514493 SPG7Q9UQ90 795 aa25.59■■□□□ 1.69
SSBP2-218ENST00000514493 CEMIPQ8WUJ3 1361 aa25.59■■□□□ 1.69
SSBP2-218ENST00000514493 C1orf141Q5JVX7 400 aa25.59■■□□□ 1.69
SSBP2-218ENST00000514493 DISP2A7MBM2 1401 aa25.58■■□□□ 1.69
SSBP2-218ENST00000514493 IL2RBP14784 551 aa25.57■■□□□ 1.68
SSBP2-218ENST00000514493 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
SSBP2-218ENST00000514493 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
SSBP2-218ENST00000514493 IL17REQ8NFR9 667 aa25.56■■□□□ 1.68
SSBP2-218ENST00000514493 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
SSBP2-218ENST00000514493 IRX6P78412 446 aaPredicted RBP25.55■■□□□ 1.68
SSBP2-218ENST00000514493 MBIPQ9NS73 344 aa25.55■■□□□ 1.68
SSBP2-218ENST00000514493 RRP1P56182 461 aaKnown RBP25.54■■□□□ 1.68
SSBP2-218ENST00000514493 ERICH6BQ5W0A0 696 aa25.54■■□□□ 1.68
SSBP2-218ENST00000514493 BCL9LQ86UU0 1499 aa25.54■■□□□ 1.68
SSBP2-218ENST00000514493 USP21Q9UK80 565 aa25.54■■□□□ 1.68
SSBP2-218ENST00000514493 POTEAQ6S8J7 498 aa25.53■■□□□ 1.68
SSBP2-218ENST00000514493 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
SSBP2-218ENST00000514493 CHL1O00533 1208 aa25.52■■□□□ 1.68
SSBP2-218ENST00000514493 CT47B1P0C2W7 299 aaPredicted RBP25.52■■□□□ 1.68
SSBP2-218ENST00000514493 PHKG2P15735 406 aa25.52■■□□□ 1.68
SSBP2-218ENST00000514493 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
SSBP2-218ENST00000514493 PCDH11XQ9BZA7 1347 aa25.52■■□□□ 1.68
SSBP2-218ENST00000514493 PCDH11YQ9BZA8 1340 aa25.52■■□□□ 1.68
SSBP2-218ENST00000514493 KDM6AO15550 1401 aaPredicted RBP25.52■■□□□ 1.68
SSBP2-218ENST00000514493 IFNL2Q8IZJ0 200 aa25.51■■□□□ 1.67
SSBP2-218ENST00000514493 MRC1P22897 1456 aa25.51■■□□□ 1.67
SSBP2-218ENST00000514493 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
SSBP2-218ENST00000514493 CYP27B1O15528 508 aa25.5■■□□□ 1.67
SSBP2-218ENST00000514493 RNMTO43148 476 aaKnown RBP25.5■■□□□ 1.67
SSBP2-218ENST00000514493 MPRIPQ6WCQ1 1025 aa25.5■■□□□ 1.67
SSBP2-218ENST00000514493 UNC5CLQ8IV45 518 aa25.5■■□□□ 1.67
SSBP2-218ENST00000514493 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
SSBP2-218ENST00000514493 LGR6Q9HBX8 967 aa25.49■■□□□ 1.67
SSBP2-218ENST00000514493 SPATA31A5Q5VU36 1347 aa25.49■■□□□ 1.67
SSBP2-218ENST00000514493 SPATA31A7Q8IWB4 1347 aa25.49■■□□□ 1.67
SSBP2-218ENST00000514493 THRAP3Q9Y2W1 955 aaKnown RBP25.49■■□□□ 1.67
SSBP2-218ENST00000514493 QTRT2Q9H974 415 aaKnown RBP25.48■■□□□ 1.67
SSBP2-218ENST00000514493 BABAM1Q9NWV8 329 aa25.48■■□□□ 1.67
SSBP2-218ENST00000514493 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
SSBP2-218ENST00000514493 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
SSBP2-218ENST00000514493 TAF7Q15545 349 aaPredicted RBP25.46■■□□□ 1.67
SSBP2-218ENST00000514493 TSPYL4Q9UJ04 414 aa25.46■■□□□ 1.67
SSBP2-218ENST00000514493 ZNF772Q68DY9 489 aaPredicted RBP25.46■■□□□ 1.67
SSBP2-218ENST00000514493 TOGARAM1Q9Y4F4 1720 aa25.45■■□□□ 1.67
SSBP2-218ENST00000514493 TEFQ10587 303 aa25.45■■□□□ 1.66
SSBP2-218ENST00000514493 VPS72Q15906 364 aa25.44■■□□□ 1.66
SSBP2-218ENST00000514493 DCAF5Q96JK2 942 aa25.44■■□□□ 1.66
SSBP2-218ENST00000514493 CDCA7Q9BWT1 371 aaPredicted RBP25.44■■□□□ 1.66
SSBP2-218ENST00000514493 RARSP54136 660 aaKnown RBP25.44■■□□□ 1.66
SSBP2-218ENST00000514493 MIS18AQ9NYP9 233 aa25.42■■□□□ 1.66
SSBP2-218ENST00000514493 BARGINQ6ZT62 677 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms