RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 NSD2O96028 1365 aa12.66□□□□□ -0.38
SDHA-217ENST00000514233 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
SDHA-217ENST00000514233 AMPHP49418 695 aa12.65□□□□□ -0.38
SDHA-217ENST00000514233 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
SDHA-217ENST00000514233 ZCRB1Q8TBF4 217 aaKnown RBP12.65□□□□□ -0.38
SDHA-217ENST00000514233 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
SDHA-217ENST00000514233 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
SDHA-217ENST00000514233 MEGF6O75095 1541 aa12.64□□□□□ -0.39
SDHA-217ENST00000514233 POLD1P28340 1107 aa12.64□□□□□ -0.39
SDHA-217ENST00000514233 LY75O60449 1722 aa12.64□□□□□ -0.39
SDHA-217ENST00000514233 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
SDHA-217ENST00000514233 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
SDHA-217ENST00000514233 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
SDHA-217ENST00000514233 KIF24Q5T7B8 1368 aa12.62□□□□□ -0.39
SDHA-217ENST00000514233 FYB1O15117 783 aa12.62□□□□□ -0.39
SDHA-217ENST00000514233 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
SDHA-217ENST00000514233 NBPF6Q5VWK0 638 aa12.62□□□□□ -0.39
SDHA-217ENST00000514233 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
SDHA-217ENST00000514233 NBPF4Q96M43 638 aa12.62□□□□□ -0.39
SDHA-217ENST00000514233 FBLN1P23142 703 aa12.61□□□□□ -0.39
SDHA-217ENST00000514233 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
SDHA-217ENST00000514233 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
SDHA-217ENST00000514233 USP47Q96K76 1375 aa12.6□□□□□ -0.39
SDHA-217ENST00000514233 TMF1P82094 1093 aa12.6□□□□□ -0.39
SDHA-217ENST00000514233 GPR162Q16538 588 aa12.6□□□□□ -0.39
SDHA-217ENST00000514233 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
SDHA-217ENST00000514233 INSRP06213 1382 aa12.59□□□□□ -0.39
SDHA-217ENST00000514233 KCNQ4P56696 695 aa12.59□□□□□ -0.39
SDHA-217ENST00000514233 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
SDHA-217ENST00000514233 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
SDHA-217ENST00000514233 FLT4P35916 1363 aa12.58□□□□□ -0.4
SDHA-217ENST00000514233 CDCA8Q53HL2 280 aa12.58□□□□□ -0.4
SDHA-217ENST00000514233 GGNBP2Q9H3C7 697 aa12.58□□□□□ -0.4
SDHA-217ENST00000514233 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
SDHA-217ENST00000514233 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
SDHA-217ENST00000514233 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
SDHA-217ENST00000514233 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
SDHA-217ENST00000514233 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
SDHA-217ENST00000514233 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
SDHA-217ENST00000514233 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
SDHA-217ENST00000514233 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
SDHA-217ENST00000514233 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
SDHA-217ENST00000514233 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
SDHA-217ENST00000514233 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
SDHA-217ENST00000514233 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
SDHA-217ENST00000514233 C5P01031 1676 aa12.54□□□□□ -0.4
SDHA-217ENST00000514233 CYP27B1O15528 508 aa12.54□□□□□ -0.4
SDHA-217ENST00000514233 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
SDHA-217ENST00000514233 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
SDHA-217ENST00000514233 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
SDHA-217ENST00000514233 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
SDHA-217ENST00000514233 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
SDHA-217ENST00000514233 CD2APQ9Y5K6 639 aa12.53□□□□□ -0.4
SDHA-217ENST00000514233 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
SDHA-217ENST00000514233 MSH5O43196 834 aa12.52□□□□□ -0.41
SDHA-217ENST00000514233 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.411e-9■□□□□ 10.8
SDHA-217ENST00000514233 CARD14Q9BXL6 1004 aa12.52□□□□□ -0.41
SDHA-217ENST00000514233 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
SDHA-217ENST00000514233 MAP2P11137 1827 aaKnown RBP12.51□□□□□ -0.41
SDHA-217ENST00000514233 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
SDHA-217ENST00000514233 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
SDHA-217ENST00000514233 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
SDHA-217ENST00000514233 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
SDHA-217ENST00000514233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.41
SDHA-217ENST00000514233 TOGARAM1Q9Y4F4 1720 aa12.51□□□□□ -0.41
SDHA-217ENST00000514233 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
SDHA-217ENST00000514233 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
SDHA-217ENST00000514233 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
SDHA-217ENST00000514233 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
SDHA-217ENST00000514233 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
SDHA-217ENST00000514233 MSL1Q68DK7 614 aa12.49□□□□□ -0.41
SDHA-217ENST00000514233 PIGBQ92521 554 aa12.49□□□□□ -0.41
SDHA-217ENST00000514233 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
SDHA-217ENST00000514233 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
SDHA-217ENST00000514233 ITGB4P16144 1822 aa12.48□□□□□ -0.41
SDHA-217ENST00000514233 AK7Q96M32 723 aa12.48□□□□□ -0.41
SDHA-217ENST00000514233 UBR3Q6ZT12 1888 aa12.47□□□□□ -0.41
SDHA-217ENST00000514233 SSFA2P28290 1259 aa12.47□□□□□ -0.41
SDHA-217ENST00000514233 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
SDHA-217ENST00000514233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
SDHA-217ENST00000514233 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
SDHA-217ENST00000514233 SIK1P57059 783 aa12.46□□□□□ -0.41
SDHA-217ENST00000514233 EYA1Q99502 592 aa12.46□□□□□ -0.41
SDHA-217ENST00000514233 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
SDHA-217ENST00000514233 ADCY9O60503 1353 aa12.45□□□□□ -0.42
SDHA-217ENST00000514233 PPM1GO15355 546 aaPredicted RBP12.45□□□□□ -0.42
SDHA-217ENST00000514233 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
SDHA-217ENST00000514233 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
SDHA-217ENST00000514233 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
SDHA-217ENST00000514233 PHKG2P15735 406 aa12.44□□□□□ -0.42
SDHA-217ENST00000514233 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
SDHA-217ENST00000514233 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
SDHA-217ENST00000514233 PHF14O94880 888 aa12.43□□□□□ -0.42
SDHA-217ENST00000514233 IGSF1Q8N6C5 1336 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 ITPK1Q13572 414 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 ASAP1Q9ULH1 1129 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
SDHA-217ENST00000514233 ERVV-2B6SEH9 535 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms