RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	VSIG10	Q8N0Z9	540 aa		9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	ABCC6	O95255	1503 aa		9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	WASHC2A	Q641Q2	1341 aa		9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	ROCK2	O75116	1388 aa	Known RBP	9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	SLIT3	O75094	1523 aa		9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	MARCH10	Q8NA82	808 aa	Predicted RBP	9.22	□□□□□ -0.93
RACK1-231	ENST00000514183	QRICH2	Q9H0J4	1663 aa		9.21	□□□□□ -0.93
RACK1-231	ENST00000514183	USP6	P35125	1406 aa		9.21	□□□□□ -0.93
RACK1-231	ENST00000514183	TTC21A	Q8NDW8	1320 aa		9.21	□□□□□ -0.93
RACK1-231	ENST00000514183	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.21	□□□□□ -0.93
RACK1-231	ENST00000514183	SLC27A3	Q5K4L6	730 aa		9.21	□□□□□ -0.94
RACK1-231	ENST00000514183	SGIP1	Q9BQI5	828 aa		9.21	□□□□□ -0.94
RACK1-231	ENST00000514183	EVC2	Q86UK5	1308 aa		9.2	□□□□□ -0.94
RACK1-231	ENST00000514183	CPSF1	Q10570	1443 aa	Known RBP	9.2	□□□□□ -0.94
RACK1-231	ENST00000514183	ARHGEF25	Q86VW2	580 aa		9.2	□□□□□ -0.94
RACK1-231	ENST00000514183	COL18A1	P39060	1754 aa		9.2	□□□□□ -0.94
RACK1-231	ENST00000514183	NHS	Q6T4R5	1651 aa		9.19	□□□□□ -0.94
RACK1-231	ENST00000514183	QSER1	Q2KHR3	1735 aa		9.19	□□□□□ -0.94
RACK1-231	ENST00000514183	PRKCSH	P14314	528 aa	Predicted RBP	9.19	□□□□□ -0.94
RACK1-231	ENST00000514183	NBPF1	Q3BBV0	1214 aa		9.19	□□□□□ -0.94
RACK1-231	ENST00000514183	CABP1	Q9NZU7	370 aa		9.19	□□□□□ -0.94
RACK1-231	ENST00000514183	UTRN	P46939	3433 aa		9.18	□□□□□ -0.94
RACK1-231	ENST00000514183	TRPM1	Q7Z4N2	1603 aa		9.18	□□□□□ -0.94
RACK1-231	ENST00000514183	TNS2	Q63HR2	1409 aa		9.18	□□□□□ -0.94
RACK1-231	ENST00000514183	KIF7	Q2M1P5	1343 aa		9.18	□□□□□ -0.94
RACK1-231	ENST00000514183	RGPD5	Q99666	1765 aa		9.18	□□□□□ -0.94
RACK1-231	ENST00000514183	IL2RB	P14784	551 aa		9.17	□□□□□ -0.94
RACK1-231	ENST00000514183	PDGFD	Q9GZP0	370 aa	Predicted RBP	9.17	□□□□□ -0.94
RACK1-231	ENST00000514183	CABP2	Q9NPB3	220 aa		9.17	□□□□□ -0.94
RACK1-231	ENST00000514183	ST20-MTHFS	A0A0A6YYL1	179 aa		9.16	□□□□□ -0.94
RACK1-231	ENST00000514183	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.16	□□□□□ -0.94
RACK1-231	ENST00000514183	AXIN2	Q9Y2T1	843 aa		9.16	□□□□□ -0.94
RACK1-231	ENST00000514183	BTAF1	O14981	1849 aa		9.16	□□□□□ -0.94
RACK1-231	ENST00000514183	PIK3C2A	O00443	1686 aa		9.15	□□□□□ -0.94
RACK1-231	ENST00000514183	ANP32C	O43423	234 aa		9.15	□□□□□ -0.94
RACK1-231	ENST00000514183	SPRYD3	Q8NCJ5	442 aa		9.15	□□□□□ -0.94
RACK1-231	ENST00000514183	TSHZ2	Q9NRE2	1034 aa		9.15	□□□□□ -0.94
RACK1-231	ENST00000514183	TTC21B	Q7Z4L5	1316 aa		9.15	□□□□□ -0.94
RACK1-231	ENST00000514183	COL24A1	Q17RW2	1714 aa		9.15	□□□□□ -0.95
RACK1-231	ENST00000514183	PELP1	Q8IZL8	1130 aa	Known RBP	9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	YTHDC1	Q96MU7	727 aa	Known RBP	9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	NLRP2	Q9NX02	1062 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	TFCP2L1	Q9NZI6	479 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	PAPPA	Q13219	1627 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	PTF1A	Q7RTS3	328 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	FLAD1	Q8NFF5	587 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	POLR3GL	Q9BT43	218 aa		9.14	□□□□□ -0.95
RACK1-231	ENST00000514183	ERBB3	P21860	1342 aa		9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	KTN1	Q86UP2	1357 aa	Known RBP	9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	AKT1S1	Q96B36	256 aa		9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	ACSBG1	Q96GR2	724 aa		9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	FAM208A	Q9UK61	1670 aa	Known RBP	9.13	□□□□□ -0.95
RACK1-231	ENST00000514183	CD2AP	Q9Y5K6	639 aa		9.12	□□□□□ -0.95
RACK1-231	ENST00000514183	USP31	Q70CQ4	1352 aa		9.11	□□□□□ -0.95
RACK1-231	ENST00000514183	HSPA6	P17066	643 aa		9.11	□□□□□ -0.95
RACK1-231	ENST00000514183	LTN1	O94822	1766 aa		9.11	□□□□□ -0.95
RACK1-231	ENST00000514183	NFAT5	O94916	1531 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	CCER2	I3L3R5	266 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	SOX12	O15370	315 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	CENPB	P07199	599 aa	Predicted RBP	9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	TESK2	Q96S53	571 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	CLEC11A	Q9Y240	323 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	USP54	Q70EL1	1684 aa		9.1	□□□□□ -0.95
RACK1-231	ENST00000514183	SHANK3	Q9BYB0	1731 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	CGNL1	Q0VF96	1302 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	PNPLA7	Q6ZV29	1317 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	ZNF827	Q17R98	1081 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	ANKRD24	Q8TF21	1146 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	LRRC4B	Q9NT99	713 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	TAOK2	Q9UL54	1235 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	MON2	Q7Z3U7	1717 aa		9.09	□□□□□ -0.95
RACK1-231	ENST00000514183	ANKRD36B	Q8N2N9	1353 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	TMF1	P82094	1093 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	DCAF8	Q5TAQ9	597 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	SYTL4	Q96C24	671 aa	Predicted RBP	9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	TERF2IP	Q9NYB0	399 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	LY75	O60449	1722 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	NSD3	Q9BZ95	1437 aa		9.08	□□□□□ -0.96
RACK1-231	ENST00000514183	DDX54	Q8TDD1	881 aa	Known RBP	9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	RNF25	Q96BH1	459 aa	Predicted RBP	9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	CCNL1	Q9UK58	526 aa	Predicted RBP	9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	ATP10D	Q9P241	1426 aa		9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	SBNO2	Q9Y2G9	1366 aa		9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	CEP350	Q5VT06	3117 aa		9.07	□□□□□ -0.96
RACK1-231	ENST00000514183	APLP1	P51693	650 aa		9.06	□□□□□ -0.96
RACK1-231	ENST00000514183	IP6K1	Q92551	441 aa		9.06	□□□□□ -0.96
RACK1-231	ENST00000514183	PUS7	Q96PZ0	661 aa	Known RBP	9.06	□□□□□ -0.96
RACK1-231	ENST00000514183	PRIM1	P49642	420 aa	Known RBP	9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	NUBP1	P53384	320 aa		9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	ZCRB1	Q8TBF4	217 aa	Known RBP	9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	PRKRIP1	Q9H875	184 aa	Predicted RBP	9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	TUBGCP6	Q96RT7	1819 aa		9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	EDC4	Q6P2E9	1401 aa	Known RBP	9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	GSE1	Q14687	1217 aa		9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	NLGN2	Q8NFZ4	835 aa		9.05	□□□□□ -0.96
RACK1-231	ENST00000514183	SMARCC1	Q92922	1105 aa	Predicted RBP	9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms