RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
CAST-240ENST00000514055 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
CAST-240ENST00000514055 NSD2O96028 1365 aa12.3□□□□□ -0.44
CAST-240ENST00000514055 APLP1P51693 650 aa12.29□□□□□ -0.44
CAST-240ENST00000514055 ANKRD24Q8TF21 1146 aa12.29□□□□□ -0.44
CAST-240ENST00000514055 HTRA3P83110 453 aa12.28□□□□□ -0.44
CAST-240ENST00000514055 CARD11Q9BXL7 1154 aa12.28□□□□□ -0.44
CAST-240ENST00000514055 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
CAST-240ENST00000514055 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
CAST-240ENST00000514055 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
CAST-240ENST00000514055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.26□□□□□ -0.45
CAST-240ENST00000514055 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
CAST-240ENST00000514055 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
CAST-240ENST00000514055 NME9Q86XW9 330 aa12.25□□□□□ -0.45
CAST-240ENST00000514055 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
CAST-240ENST00000514055 LY75O60449 1722 aa12.25□□□□□ -0.45
CAST-240ENST00000514055 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
CAST-240ENST00000514055 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
CAST-240ENST00000514055 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
CAST-240ENST00000514055 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
CAST-240ENST00000514055 KTN1Q86UP2 1357 aaKnown RBP12.23□□□□□ -0.45
CAST-240ENST00000514055 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
CAST-240ENST00000514055 PCNTO95613 3336 aa12.23□□□□□ -0.45
CAST-240ENST00000514055 TOMM70O94826 608 aa12.22□□□□□ -0.45
CAST-240ENST00000514055 TNS4Q8IZW8 715 aa12.22□□□□□ -0.45
CAST-240ENST00000514055 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
CAST-240ENST00000514055 USP31Q70CQ4 1352 aa12.21□□□□□ -0.45
CAST-240ENST00000514055 USP47Q96K76 1375 aa12.21□□□□□ -0.45
CAST-240ENST00000514055 LTN1O94822 1766 aa12.21□□□□□ -0.45
CAST-240ENST00000514055 PRELPP51888 382 aa12.21□□□□□ -0.45
CAST-240ENST00000514055 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
CAST-240ENST00000514055 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
CAST-240ENST00000514055 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
CAST-240ENST00000514055 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
CAST-240ENST00000514055 MEGF6O75095 1541 aa12.18□□□□□ -0.46
CAST-240ENST00000514055 PHF14O94880 888 aa12.18□□□□□ -0.46
CAST-240ENST00000514055 ZCRB1Q8TBF4 217 aaKnown RBP12.18□□□□□ -0.46
CAST-240ENST00000514055 FBLN1P23142 703 aa12.17□□□□□ -0.46
CAST-240ENST00000514055 IP6K1Q92551 441 aa12.17□□□□□ -0.46
CAST-240ENST00000514055 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
CAST-240ENST00000514055 C5P01031 1676 aa12.16□□□□□ -0.46
CAST-240ENST00000514055 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
CAST-240ENST00000514055 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
CAST-240ENST00000514055 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
CAST-240ENST00000514055 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
CAST-240ENST00000514055 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
CAST-240ENST00000514055 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
CAST-240ENST00000514055 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
CAST-240ENST00000514055 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
CAST-240ENST00000514055 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
CAST-240ENST00000514055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
CAST-240ENST00000514055 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
CAST-240ENST00000514055 AK7Q96M32 723 aa12.14□□□□□ -0.47
CAST-240ENST00000514055 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 MPRIPQ6WCQ1 1025 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 TESK2Q96S53 571 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 PXDNLA1KZ92 1463 aa12.13□□□□□ -0.47
CAST-240ENST00000514055 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
CAST-240ENST00000514055 A0A0G2JLW4 131 aa12.12□□□□□ -0.47
CAST-240ENST00000514055 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
CAST-240ENST00000514055 HOXC9P31274 260 aa12.12□□□□□ -0.47
CAST-240ENST00000514055 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAST-240ENST00000514055 SLC12A5Q9H2X9 1139 aa12.12□□□□□ -0.47
CAST-240ENST00000514055 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
CAST-240ENST00000514055 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
CAST-240ENST00000514055 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
CAST-240ENST00000514055 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
CAST-240ENST00000514055 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 MMP10P09238 476 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 HSPA1AP0DMV8 641 aaKnown RBP12.1□□□□□ -0.47
CAST-240ENST00000514055 HSPA1BP0DMV9 641 aaKnown RBP12.1□□□□□ -0.47
CAST-240ENST00000514055 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
CAST-240ENST00000514055 TMF1P82094 1093 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 C16orf71Q8IYS4 520 aaPredicted RBP12.1□□□□□ -0.47
CAST-240ENST00000514055 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
CAST-240ENST00000514055 N4BP2Q86UW6 1770 aaPredicted RBP12.1□□□□□ -0.47
CAST-240ENST00000514055 DPEP1P16444 411 aa12.09□□□□□ -0.47
CAST-240ENST00000514055 FSTL1Q12841 308 aa12.09□□□□□ -0.47
CAST-240ENST00000514055 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
CAST-240ENST00000514055 A0A1W2PP64 1363 aa12.08□□□□□ -0.48
CAST-240ENST00000514055 AMPHP49418 695 aa12.08□□□□□ -0.48
CAST-240ENST00000514055 HDGFL2Q7Z4V5 671 aaPredicted RBP12.08□□□□□ -0.48
CAST-240ENST00000514055 EDC4Q6P2E9 1401 aaKnown RBP12.08□□□□□ -0.48
CAST-240ENST00000514055 CYP27B1O15528 508 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 FCHSD2O94868 740 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 SLC34A2O95436 690 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 SSFA2P28290 1259 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 ITPK1Q13572 414 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 PIGBQ92521 554 aa12.07□□□□□ -0.48
CAST-240ENST00000514055 PUS7Q96PZ0 661 aaKnown RBP12.07□□□□□ -0.48
CAST-240ENST00000514055 GNPATO15228 680 aa12.06□□□□□ -0.48
CAST-240ENST00000514055 TGFB2P61812 414 aa12.06□□□□□ -0.48
CAST-240ENST00000514055 RRS1Q15050 365 aaKnown RBP12.06□□□□□ -0.48
CAST-240ENST00000514055 CDCA8Q53HL2 280 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms