RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 CTDSPL2Q05D32 466 aa9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 Q3C1V9 767 aa9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 WBP1LQ9NX94 342 aa9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 PZPP20742 1482 aa9.98□□□□□ -0.81
HMGN1P17-201ENST00000513734 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 PTPRTO14522 1441 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 ABCC5O15440 1437 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 FGD6Q6ZV73 1430 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 TCOF1Q13428 1488 aaKnown RBP9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
HMGN1P17-201ENST00000513734 DEPDC5O75140 1603 aa9.96□□□□□ -0.81
HMGN1P17-201ENST00000513734 APBB1O00213 710 aa9.96□□□□□ -0.82
HMGN1P17-201ENST00000513734 KCTD12Q96CX2 325 aaKnown RBP9.96□□□□□ -0.82
HMGN1P17-201ENST00000513734 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
HMGN1P17-201ENST00000513734 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.82
HMGN1P17-201ENST00000513734 SHANK2Q9UPX8 1470 aa9.96□□□□□ -0.82
HMGN1P17-201ENST00000513734 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 PRM3Q9NNZ6 103 aa9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 DAPK1P53355 1430 aa9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 PRDM15P57071 1507 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 DUOX2Q9NRD8 1548 aa9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 UBR1Q8IWV7 1749 aa9.95□□□□□ -0.82
HMGN1P17-201ENST00000513734 STRCP1A6NGW2 1772 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 SPATA31D1Q6ZQQ2 1576 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 PLA2R1Q13018 1463 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 TNRQ92752 1358 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 SOCS7O14512 581 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 POTEGQ6S5H5 508 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 THSD4Q6ZMP0 1018 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
HMGN1P17-201ENST00000513734 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 NR1I2O75469 434 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 TSPY4P0CV99 314 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 TSPY10P0CW01 314 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 CDAN1Q8IWY9 1227 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 FNBP4Q8N3X1 1017 aaPredicted RBP9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 HMX1Q9NP08 348 aaPredicted RBP9.93□□□□□ -0.82
HMGN1P17-201ENST00000513734 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
HMGN1P17-201ENST00000513734 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
HMGN1P17-201ENST00000513734 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
HMGN1P17-201ENST00000513734 ABL2P42684 1182 aa9.92□□□□□ -0.82
HMGN1P17-201ENST00000513734 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
HMGN1P17-201ENST00000513734 ZNF335Q9H4Z2 1342 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 IQGAP1P46940 1657 aa9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 ARID3AQ99856 593 aa9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 USB1Q9BQ65 265 aaKnown RBP9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 UGGT1Q9NYU2 1555 aa9.91□□□□□ -0.82
HMGN1P17-201ENST00000513734 PIK3C2BO00750 1634 aa9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 VWDEQ8N2E2 1590 aa9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 POTEMA6NI47 508 aa9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P17-201ENST00000513734 ERBINQ96RT1 1412 aa9.9□□□□□ -0.83
HMGN1P17-201ENST00000513734 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 COPS2P61201 443 aa9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 TRIM34Q9BYJ4 488 aa9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 ZNF330Q9Y3S2 320 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
HMGN1P17-201ENST00000513734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMGN1P17-201ENST00000513734 SYNMO15061 1565 aa9.88□□□□□ -0.83
HMGN1P17-201ENST00000513734 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
HMGN1P17-201ENST00000513734 ARXQ96QS3 562 aa9.88□□□□□ -0.83
HMGN1P17-201ENST00000513734 XIRP1Q702N8 1843 aaKnown RBP9.88□□□□□ -0.83
HMGN1P17-201ENST00000513734 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
HMGN1P17-201ENST00000513734 PTPN5P54829 565 aa9.87□□□□□ -0.83
HMGN1P17-201ENST00000513734 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
HMGN1P17-201ENST00000513734 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
HMGN1P17-201ENST00000513734 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
HMGN1P17-201ENST00000513734 GCC2Q8IWJ2 1684 aa9.86□□□□□ -0.83
HMGN1P17-201ENST00000513734 EFCAB6Q5THR3 1501 aa9.86□□□□□ -0.83
HMGN1P17-201ENST00000513734 FAM50AQ14320 339 aaKnown RBP9.85□□□□□ -0.83
HMGN1P17-201ENST00000513734 NR6A1Q15406 480 aa9.85□□□□□ -0.83
HMGN1P17-201ENST00000513734 LYPD8Q6UX82 237 aa9.85□□□□□ -0.83
HMGN1P17-201ENST00000513734 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
HMGN1P17-201ENST00000513734 ALKQ9UM73 1620 aa9.85□□□□□ -0.83
HMGN1P17-201ENST00000513734 UNC13BO14795 1591 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 E9PCH4 1651 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 TET3O43151 1660 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 LMTK2Q8IWU2 1503 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 ANKRD30AQ9BXX3 1397 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 MED14O60244 1454 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
HMGN1P17-201ENST00000513734 NPHP4O75161 1426 aaPredicted RBP9.83□□□□□ -0.84
HMGN1P17-201ENST00000513734 ARHGAP31Q2M1Z3 1444 aa9.83□□□□□ -0.84
HMGN1P17-201ENST00000513734 JUNDP17535 347 aa9.83□□□□□ -0.84
HMGN1P17-201ENST00000513734 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
HMGN1P17-201ENST00000513734 SPSB2Q99619 263 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms