RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 DCCP43146 1447 aa16.84■□□□□ 0.29
SNCAIP-218ENST00000513719 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
SNCAIP-218ENST00000513719 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-218ENST00000513719 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
SNCAIP-218ENST00000513719 TMEM57Q8N5G2 664 aa16.83■□□□□ 0.28
SNCAIP-218ENST00000513719 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 MSH6P52701 1360 aa16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-218ENST00000513719 XIRP1Q702N8 1843 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-218ENST00000513719 CADPS2Q86UW7 1296 aa16.81■□□□□ 0.28
SNCAIP-218ENST00000513719 MS4A1P11836 297 aa16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 AAMPQ13685 434 aa16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 MED1Q15648 1581 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SNCAIP-218ENST00000513719 ITPRIPQ8IWB1 547 aa16.79■□□□□ 0.28
SNCAIP-218ENST00000513719 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
SNCAIP-218ENST00000513719 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
SNCAIP-218ENST00000513719 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
SNCAIP-218ENST00000513719 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
SNCAIP-218ENST00000513719 PDE4AP27815 886 aa16.78■□□□□ 0.28
SNCAIP-218ENST00000513719 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
SNCAIP-218ENST00000513719 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
SNCAIP-218ENST00000513719 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
SNCAIP-218ENST00000513719 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
SNCAIP-218ENST00000513719 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
SNCAIP-218ENST00000513719 BACH2Q9BYV9 841 aa16.76■□□□□ 0.27
SNCAIP-218ENST00000513719 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
SNCAIP-218ENST00000513719 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
SNCAIP-218ENST00000513719 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
SNCAIP-218ENST00000513719 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 LRRC37A3O60309 1634 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 PXDNQ92626 1479 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 NCAPD2Q15021 1401 aa16.75■□□□□ 0.27
SNCAIP-218ENST00000513719 RGS3P49796 1198 aa16.74■□□□□ 0.27
SNCAIP-218ENST00000513719 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
SNCAIP-218ENST00000513719 ABCC4O15439 1325 aa16.74■□□□□ 0.27
SNCAIP-218ENST00000513719 ZBTB7BO15156 539 aaPredicted RBP16.73■□□□□ 0.27
SNCAIP-218ENST00000513719 MSH5O43196 834 aa16.73■□□□□ 0.27
SNCAIP-218ENST00000513719 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
SNCAIP-218ENST00000513719 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
SNCAIP-218ENST00000513719 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 CEMIPQ8WUJ3 1361 aa16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 RGS12O14924 1447 aa16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 ERBB3P21860 1342 aa16.71■□□□□ 0.27
SNCAIP-218ENST00000513719 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
SNCAIP-218ENST00000513719 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
SNCAIP-218ENST00000513719 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
SNCAIP-218ENST00000513719 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
SNCAIP-218ENST00000513719 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
SNCAIP-218ENST00000513719 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
SNCAIP-218ENST00000513719 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
SNCAIP-218ENST00000513719 G2E3Q7L622 706 aa16.68■□□□□ 0.26
SNCAIP-218ENST00000513719 COL18A1P39060 1754 aa16.68■□□□□ 0.26
SNCAIP-218ENST00000513719 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
SNCAIP-218ENST00000513719 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
SNCAIP-218ENST00000513719 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-218ENST00000513719 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-218ENST00000513719 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
SNCAIP-218ENST00000513719 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
SNCAIP-218ENST00000513719 C1orf115Q9H7X2 142 aa16.67■□□□□ 0.26
SNCAIP-218ENST00000513719 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
SNCAIP-218ENST00000513719 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
SNCAIP-218ENST00000513719 MPRIPQ6WCQ1 1025 aa16.66■□□□□ 0.26
SNCAIP-218ENST00000513719 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
SNCAIP-218ENST00000513719 KCNQ3O43525 872 aa16.65■□□□□ 0.26
SNCAIP-218ENST00000513719 AMOTQ4VCS5 1084 aa16.65■□□□□ 0.26
SNCAIP-218ENST00000513719 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
SNCAIP-218ENST00000513719 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
SNCAIP-218ENST00000513719 SIRT2Q8IXJ6 389 aa16.64■□□□□ 0.25
SNCAIP-218ENST00000513719 SMC5Q8IY18 1101 aa16.64■□□□□ 0.25
SNCAIP-218ENST00000513719 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
SNCAIP-218ENST00000513719 PTPRCP08575 1304 aa16.63■□□□□ 0.25
SNCAIP-218ENST00000513719 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
SNCAIP-218ENST00000513719 RNMTO43148 476 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-218ENST00000513719 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
SNCAIP-218ENST00000513719 CPDO75976 1380 aa16.62■□□□□ 0.25
SNCAIP-218ENST00000513719 EIF4A1P60842 406 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-218ENST00000513719 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-218ENST00000513719 F6X3S4 739 aa16.61■□□□□ 0.25
SNCAIP-218ENST00000513719 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
SNCAIP-218ENST00000513719 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
SNCAIP-218ENST00000513719 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-218ENST00000513719 MEGF6O75095 1541 aa16.59■□□□□ 0.25
SNCAIP-218ENST00000513719 BTBD11A6QL63 1104 aa16.58■□□□□ 0.25
SNCAIP-218ENST00000513719 TEFQ10587 303 aa16.58■□□□□ 0.25
SNCAIP-218ENST00000513719 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.25
SNCAIP-218ENST00000513719 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.24
SNCAIP-218ENST00000513719 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
SNCAIP-218ENST00000513719 FLIIQ13045 1269 aa16.58■□□□□ 0.24
SNCAIP-218ENST00000513719 STK31Q9BXU1 1019 aa16.58■□□□□ 0.24
SNCAIP-218ENST00000513719 SOS1Q07889 1333 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms