RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 NALCNQ8IZF0 1738 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 DCCP43146 1447 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 PTPN23Q9H3S7 1636 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 PBX2P40425 430 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 PSEN2P49810 448 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 DEFB132Q7Z7B7 95 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 SLC52A1Q9NWF4 448 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 USP21Q9UK80 565 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 LRP5O75197 1615 aa7.59□□□□□ -1.19
HTT-211ENST00000513326 C3orf80F5H4A9 247 aa7.58□□□□□ -1.2
HTT-211ENST00000513326 MARVELD3Q96A59 401 aa7.58□□□□□ -1.2
HTT-211ENST00000513326 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
HTT-211ENST00000513326 KIAA1468Q9P260 1216 aa7.58□□□□□ -1.2
HTT-211ENST00000513326 METP08581 1390 aa7.58□□□□□ -1.2
HTT-211ENST00000513326 PIK3R4Q99570 1358 aa7.58□□□□□ -1.2
HTT-211ENST00000513326 BCL9LQ86UU0 1499 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 SH3D19Q5HYK7 790 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 ZNF687Q8N1G0 1237 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 RABGEF1Q9UJ41 708 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
HTT-211ENST00000513326 ADGRL3Q9HAR2 1447 aa7.57□□□□□ -1.2
HTT-211ENST00000513326 LAMC1P11047 1609 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 RPRD2Q5VT52 1461 aaKnown RBP7.56□□□□□ -1.2
HTT-211ENST00000513326 GLI3P10071 1580 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 FAM205CA6NFA0 338 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 FNBP4Q8N3X1 1017 aaPredicted RBP7.56□□□□□ -1.2
HTT-211ENST00000513326 FAM163AQ96GL9 167 aaPredicted RBP7.56□□□□□ -1.2
HTT-211ENST00000513326 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
HTT-211ENST00000513326 ORAI2Q96SN7 254 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 E9PCH4 1651 aa7.56□□□□□ -1.2
HTT-211ENST00000513326 MYOM2P54296 1465 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 C1orf167Q5SNV9 1468 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 SMAPO00193 183 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
HTT-211ENST00000513326 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 COL22A1Q8NFW1 1626 aaPredicted RBP7.55□□□□□ -1.2
HTT-211ENST00000513326 ANKRD30AQ9BXX3 1397 aa7.55□□□□□ -1.2
HTT-211ENST00000513326 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
HTT-211ENST00000513326 BLMP54132 1417 aaPredicted RBP7.54□□□□□ -1.2
HTT-211ENST00000513326 PTCH1Q13635 1447 aa7.54□□□□□ -1.2
HTT-211ENST00000513326 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
HTT-211ENST00000513326 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.54□□□□□ -1.2
HTT-211ENST00000513326 RALGAPBQ86X10 1494 aa7.54□□□□□ -1.2
HTT-211ENST00000513326 DDX11L8A8MPP1 907 aa7.53□□□□□ -1.2
HTT-211ENST00000513326 CD46P15529 392 aa7.53□□□□□ -1.2
HTT-211ENST00000513326 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
HTT-211ENST00000513326 VPS9D1Q9Y2B5 631 aa7.53□□□□□ -1.2
HTT-211ENST00000513326 ADGRL2O95490 1459 aa7.53□□□□□ -1.2
HTT-211ENST00000513326 ANKRD50Q9ULJ7 1429 aa7.52□□□□□ -1.2
HTT-211ENST00000513326 ROBO2Q9HCK4 1378 aa7.52□□□□□ -1.21
HTT-211ENST00000513326 HRCP23327 699 aa7.52□□□□□ -1.21
HTT-211ENST00000513326 HDGFP51858 240 aaKnown RBP7.52□□□□□ -1.21
HTT-211ENST00000513326 GJD4Q96KN9 370 aaPredicted RBP7.52□□□□□ -1.21
HTT-211ENST00000513326 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
HTT-211ENST00000513326 TBC1D2Q9BYX2 928 aa7.52□□□□□ -1.21
HTT-211ENST00000513326 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.21
HTT-211ENST00000513326 PXDNQ92626 1479 aa7.51□□□□□ -1.21
HTT-211ENST00000513326 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
HTT-211ENST00000513326 MYSM1Q5VVJ2 828 aa7.51□□□□□ -1.21
HTT-211ENST00000513326 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
HTT-211ENST00000513326 TK2O00142 265 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 LAPTM4BQ86VI4 370 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 NUTM1Q86Y26 1132 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 SPIRE2Q8WWL2 714 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 NBPF3Q9H094 633 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 POLR3EQ9NVU0 708 aa7.5□□□□□ -1.21
HTT-211ENST00000513326 SEPT9Q9UHD8 586 aaPredicted RBP7.5□□□□□ -1.21
HTT-211ENST00000513326 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.49□□□□□ -1.21
HTT-211ENST00000513326 SLIT2O94813 1529 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 POTEB3A0JP26 581 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 CLK2P49760 499 aaKnown RBP7.49□□□□□ -1.21
HTT-211ENST00000513326 POTEBQ6S5H4 581 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 IQGAP3Q86VI3 1631 aa7.49□□□□□ -1.21
HTT-211ENST00000513326 NEXMIFQ5QGS0 1516 aa7.48□□□□□ -1.21
HTT-211ENST00000513326 SWT1Q5T5J6 900 aaKnown RBP7.48□□□□□ -1.21
HTT-211ENST00000513326 SEPT12Q8IYM1 358 aa7.48□□□□□ -1.21
HTT-211ENST00000513326 PROCA1Q8NCQ7 364 aaPredicted RBP7.48□□□□□ -1.21
HTT-211ENST00000513326 SPHKAPQ2M3C7 1700 aa7.47□□□□□ -1.21
HTT-211ENST00000513326 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
HTT-211ENST00000513326 FLIIQ13045 1269 aa7.47□□□□□ -1.21
HTT-211ENST00000513326 R3HDM1Q15032 1099 aaKnown RBP7.47□□□□□ -1.21
HTT-211ENST00000513326 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
HTT-211ENST00000513326 UNC5CLQ8IV45 518 aa7.47□□□□□ -1.21
HTT-211ENST00000513326 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
HTT-211ENST00000513326 CLTCL1P53675 1640 aa7.46□□□□□ -1.21
HTT-211ENST00000513326 USP32Q8NFA0 1604 aa7.46□□□□□ -1.21
HTT-211ENST00000513326 LOC105371045A0A1W2PR82 267 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 FOXO3O43524 673 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 KDM4AO75164 1064 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 GJA5P36382 358 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 GCGRP47871 477 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms