RNA–Protein interactions for RNA: ENST00000513026.5

LINC00461-213, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 533 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-213	ENST00000513026	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	ANP32B	Q92688	251 aa	Known RBP	12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	KIF20B	Q96Q89	1820 aa		12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	PPP1R9B	Q96SB3	815 aa		12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	API5	Q9BZZ5	524 aa	Known RBP	12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	CWC22	Q9HCG8	908 aa	Known RBP	12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	IFT57	Q9NWB7	429 aa		12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026	NOB1	Q9ULX3	412 aa	Known RBP	12.75	□□□□□ -0.37
LINC00461-213	ENST00000513026		K7ELQ4	463 aa	Predicted RBP	12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	HSP90AB1	P08238	724 aa	Known RBP	12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	PRKAR2A	P13861	404 aa	Known RBP	12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	GNAI1	P63096	354 aa		12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	KLHL40	Q2TBA0	621 aa		12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	BARGIN	Q6ZT62	677 aa		12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	TMEM57	Q8N5G2	664 aa		12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	TRIM44	Q96DX7	344 aa	Predicted RBP	12.74	□□□□□ -0.37
LINC00461-213	ENST00000513026	PTPRM	P28827	1452 aa		12.73	□□□□□ -0.37
LINC00461-213	ENST00000513026	AATK	Q6ZMQ8	1374 aa		12.73	□□□□□ -0.37
LINC00461-213	ENST00000513026	ABCC4	O15439	1325 aa		12.73	□□□□□ -0.37
LINC00461-213	ENST00000513026	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.73	□□□□□ -0.37
LINC00461-213	ENST00000513026	CPSF1	Q10570	1443 aa	Known RBP	12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	CDC45	O75419	566 aa		12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	HSP90AA1	P07900	732 aa	Known RBP	12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	RIPK4	P57078	832 aa		12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	TNPO1	Q92973	898 aa	Known RBP	12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	KIF12	Q96FN5	646 aa		12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	DDX27	Q96GQ7	796 aa	Known RBP	12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	CD163L1	Q9NR16	1453 aa		12.72	□□□□□ -0.37
LINC00461-213	ENST00000513026	ZBTB7B	O15156	539 aa	Predicted RBP	12.71	□□□□□ -0.37
LINC00461-213	ENST00000513026	MCM5	P33992	734 aa		12.71	□□□□□ -0.37
LINC00461-213	ENST00000513026	ZNF445	P59923	1031 aa		12.71	□□□□□ -0.37
LINC00461-213	ENST00000513026	NFE2L2	Q16236	605 aa		12.71	□□□□□ -0.37
LINC00461-213	ENST00000513026	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.71	□□□□□ -0.38
LINC00461-213	ENST00000513026	FYB1	O15117	783 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	EPB41L2	O43491	1005 aa	Known RBP	12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	ZNF853	P0CG23	659 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	BCL2L13	Q9BXK5	485 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	CRISPLD2	Q9H0B8	497 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	TNN	Q9UQP3	1299 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	ARHGEF40	Q8TER5	1519 aa		12.7	□□□□□ -0.38
LINC00461-213	ENST00000513026	MRPL50	Q8N5N7	158 aa	Known RBP	12.69	□□□□□ -0.38
LINC00461-213	ENST00000513026	MAP7D2	Q96T17	732 aa		12.69	□□□□□ -0.38
LINC00461-213	ENST00000513026	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.69	□□□□□ -0.38
LINC00461-213	ENST00000513026	TMEM131L	A2VDJ0	1609 aa		12.69	□□□□□ -0.38
LINC00461-213	ENST00000513026	U2SURP	O15042	1029 aa	Known RBP	12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	VAMP4	O75379	141 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	MCM2	P49736	904 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	CASC1	Q6TDU7	716 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	TSR2	Q969E8	191 aa	Known RBP	12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	SIRT1	Q96EB6	747 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	KIF2C	Q99661	725 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	SIGLEC1	Q9BZZ2	1709 aa		12.68	□□□□□ -0.38
LINC00461-213	ENST00000513026	LRRC7	Q96NW7	1537 aa		12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	TNNT2	P45379	298 aa	Predicted RBP	12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	ZSCAN30	Q86W11	494 aa		12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	MS4A4A	Q96JQ5	239 aa		12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	AK7	Q96M32	723 aa		12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	DCTPP1	Q9H773	170 aa		12.67	□□□□□ -0.38
LINC00461-213	ENST00000513026	DIP2C	Q9Y2E4	1556 aa		12.66	□□□□□ -0.38
LINC00461-213	ENST00000513026	EDC4	Q6P2E9	1401 aa	Known RBP	12.66	□□□□□ -0.38
LINC00461-213	ENST00000513026	CAMK2B	Q13554	666 aa		12.66	□□□□□ -0.38
LINC00461-213	ENST00000513026	MTERF4	Q7Z6M4	381 aa	Known RBP	12.66	□□□□□ -0.38
LINC00461-213	ENST00000513026	CYP2E1	P05181	493 aa	Predicted RBP	12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	SRPK2	P78362	688 aa	Known RBP	12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	INTS3	Q68E01	1043 aa	Known RBP	12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	TMEM132E	Q6IEE7	984 aa		12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	TBC1D9	Q6ZT07	1266 aa		12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	LNPK	Q9C0E8	428 aa		12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	KIAA0232	Q92628	1395 aa		12.65	□□□□□ -0.38
LINC00461-213	ENST00000513026	PREX1	Q8TCU6	1659 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	ST18	O60284	1047 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	REC8	O95072	547 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	CSPP1	Q1MSJ5	1256 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	ANKRD45	Q5TZF3	282 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	GPIHBP1	Q8IV16	184 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	KRI1	Q8N9T8	703 aa	Known RBP	12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	IL17RA	Q96F46	866 aa		12.64	□□□□□ -0.39
LINC00461-213	ENST00000513026	PTPRC	P08575	1304 aa		12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	ALK	Q9UM73	1620 aa		12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	OFD1	O75665	1012 aa		12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	BAG4	O95429	457 aa	Known RBP	12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	MBD3	O95983	291 aa		12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	NASP	P49321	788 aa	Predicted RBP	12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	PANK2	Q9BZ23	570 aa		12.63	□□□□□ -0.39
LINC00461-213	ENST00000513026	SOS1	Q07889	1333 aa	Predicted RBP	12.62	□□□□□ -0.39
LINC00461-213	ENST00000513026	RBM26	Q5T8P6	1007 aa	Known RBP	12.62	□□□□□ -0.39
LINC00461-213	ENST00000513026	PDCL3	Q9H2J4	239 aa		12.62	□□□□□ -0.39
LINC00461-213	ENST00000513026	OSBPL3	Q9H4L5	887 aa		12.62	□□□□□ -0.39
LINC00461-213	ENST00000513026	ZNF500	O60304	480 aa	Predicted RBP	12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	TTC22	Q5TAA0	569 aa		12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	GGT6	Q6P531	493 aa		12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	ANKRD44	Q8N8A2	993 aa		12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	PDLIM2	Q96JY6	352 aa		12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	GZF1	Q9H116	711 aa	Predicted RBP	12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	GGNBP2	Q9H3C7	697 aa		12.61	□□□□□ -0.39
LINC00461-213	ENST00000513026	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms