RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
LINC01550-203ENST00000512901 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
LINC01550-203ENST00000512901 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
LINC01550-203ENST00000512901 MEGF6O75095 1541 aa13.7□□□□□ -0.22
LINC01550-203ENST00000512901 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
LINC01550-203ENST00000512901 IL2RBP14784 551 aa13.69□□□□□ -0.22
LINC01550-203ENST00000512901 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
LINC01550-203ENST00000512901 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
LINC01550-203ENST00000512901 USP21Q9UK80 565 aa13.69□□□□□ -0.22
LINC01550-203ENST00000512901 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
LINC01550-203ENST00000512901 FNBP4Q8N3X1 1017 aaPredicted RBP13.69□□□□□ -0.22
LINC01550-203ENST00000512901 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
LINC01550-203ENST00000512901 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
LINC01550-203ENST00000512901 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
LINC01550-203ENST00000512901 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
LINC01550-203ENST00000512901 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
LINC01550-203ENST00000512901 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
LINC01550-203ENST00000512901 AFF2P51816 1311 aa13.67□□□□□ -0.22
LINC01550-203ENST00000512901 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
LINC01550-203ENST00000512901 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
LINC01550-203ENST00000512901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01550-203ENST00000512901 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
LINC01550-203ENST00000512901 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
LINC01550-203ENST00000512901 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
LINC01550-203ENST00000512901 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
LINC01550-203ENST00000512901 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 MCM10Q7L590 875 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
LINC01550-203ENST00000512901 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
LINC01550-203ENST00000512901 E9PSI1 815 aa13.65□□□□□ -0.22
LINC01550-203ENST00000512901 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
LINC01550-203ENST00000512901 VPS72Q15906 364 aa13.65□□□□□ -0.22
LINC01550-203ENST00000512901 THRAP3Q9Y2W1 955 aaKnown RBP13.65□□□□□ -0.22
LINC01550-203ENST00000512901 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
LINC01550-203ENST00000512901 WNK3Q9BYP7 1800 aa13.65□□□□□ -0.22
LINC01550-203ENST00000512901 SLFN5Q08AF3 891 aa13.64□□□□□ -0.23
LINC01550-203ENST00000512901 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
LINC01550-203ENST00000512901 LAS1LQ9Y4W2 734 aaKnown RBP13.64□□□□□ -0.23
LINC01550-203ENST00000512901 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
LINC01550-203ENST00000512901 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
LINC01550-203ENST00000512901 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
LINC01550-203ENST00000512901 IL16Q14005 1332 aa13.63□□□□□ -0.23
LINC01550-203ENST00000512901 PCDH11XQ9BZA7 1347 aa13.63□□□□□ -0.23
LINC01550-203ENST00000512901 PCDH11YQ9BZA8 1340 aa13.63□□□□□ -0.23
LINC01550-203ENST00000512901 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
LINC01550-203ENST00000512901 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
LINC01550-203ENST00000512901 PHKG2P15735 406 aa13.62□□□□□ -0.23
LINC01550-203ENST00000512901 GNAI1P63096 354 aa13.62□□□□□ -0.23
LINC01550-203ENST00000512901 TRPC5Q9UL62 973 aaPredicted RBP13.62□□□□□ -0.23
LINC01550-203ENST00000512901 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
LINC01550-203ENST00000512901 EXOC5O00471 708 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 CYP27B1O15528 508 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 DUSP27Q5VZP5 1158 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 IL17REQ8NFR9 667 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
LINC01550-203ENST00000512901 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
LINC01550-203ENST00000512901 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
LINC01550-203ENST00000512901 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
LINC01550-203ENST00000512901 A0A0G2JS52 829 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 MYT1Q01538 1121 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 TEFQ10587 303 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 TSR2Q969E8 191 aaKnown RBP13.6□□□□□ -0.23
LINC01550-203ENST00000512901 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 LGR6Q9HBX8 967 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 LRRC37A3O60309 1634 aa13.6□□□□□ -0.23
LINC01550-203ENST00000512901 RNMTO43148 476 aaKnown RBP13.59□□□□□ -0.23
LINC01550-203ENST00000512901 DDB1Q16531 1140 aa13.59□□□□□ -0.23
LINC01550-203ENST00000512901 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
LINC01550-203ENST00000512901 GJD4Q96KN9 370 aaPredicted RBP13.59□□□□□ -0.23
LINC01550-203ENST00000512901 ATRNO75882 1429 aa13.59□□□□□ -0.23
LINC01550-203ENST00000512901 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
LINC01550-203ENST00000512901 TNS2Q63HR2 1409 aa13.58□□□□□ -0.23
LINC01550-203ENST00000512901 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
LINC01550-203ENST00000512901 DCAF5Q96JK2 942 aa13.58□□□□□ -0.24
LINC01550-203ENST00000512901 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
LINC01550-203ENST00000512901 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
LINC01550-203ENST00000512901 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
LINC01550-203ENST00000512901 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
LINC01550-203ENST00000512901 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
LINC01550-203ENST00000512901 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
LINC01550-203ENST00000512901 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
LINC01550-203ENST00000512901 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
LINC01550-203ENST00000512901 GLI3P10071 1580 aa13.57□□□□□ -0.24
LINC01550-203ENST00000512901 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
LINC01550-203ENST00000512901 CHL1O00533 1208 aa13.55□□□□□ -0.24
LINC01550-203ENST00000512901 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
LINC01550-203ENST00000512901 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
LINC01550-203ENST00000512901 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
LINC01550-203ENST00000512901 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 CABP4P57796 275 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 BABAM1Q9NWV8 329 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
LINC01550-203ENST00000512901 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms