RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 Q3C1V9 767 aa10.57□□□□□ -0.72
RFC1-215ENST00000512881 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
RFC1-215ENST00000512881 PDZRN3Q9UPQ7 1066 aa10.57□□□□□ -0.72
RFC1-215ENST00000512881 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
RFC1-215ENST00000512881 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
RFC1-215ENST00000512881 ARHGAP31Q2M1Z3 1444 aa10.56□□□□□ -0.72
RFC1-215ENST00000512881 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
RFC1-215ENST00000512881 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
RFC1-215ENST00000512881 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
RFC1-215ENST00000512881 ZNF697Q5TEC3 545 aa10.55□□□□□ -0.72
RFC1-215ENST00000512881 NPHP4O75161 1426 aaPredicted RBP10.55□□□□□ -0.72
RFC1-215ENST00000512881 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
RFC1-215ENST00000512881 LTKP29376 864 aa10.54□□□□□ -0.72
RFC1-215ENST00000512881 SPATA31D1Q6ZQQ2 1576 aa10.54□□□□□ -0.72
RFC1-215ENST00000512881 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
RFC1-215ENST00000512881 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
RFC1-215ENST00000512881 TRIM66O15016 1216 aa10.53□□□□□ -0.72
RFC1-215ENST00000512881 MMP16P51512 607 aa10.53□□□□□ -0.72
RFC1-215ENST00000512881 IDI1Q13907 227 aa10.53□□□□□ -0.72
RFC1-215ENST00000512881 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
RFC1-215ENST00000512881 MED14O60244 1454 aa10.53□□□□□ -0.72
RFC1-215ENST00000512881 TOM1O60784 492 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 PRR20EP86478 221 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 PRR20CP86479 221 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 PRR20DP86480 221 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 PRR20BP86481 221 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 PRR20AP86496 221 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.73
RFC1-215ENST00000512881 EID1Q9Y6B2 187 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 NEURL4Q96JN8 1562 aa10.52□□□□□ -0.73
RFC1-215ENST00000512881 ADGRL2O95490 1459 aa10.51□□□□□ -0.73
RFC1-215ENST00000512881 DXOO77932 396 aaKnown RBP10.51□□□□□ -0.73
RFC1-215ENST00000512881 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
RFC1-215ENST00000512881 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
RFC1-215ENST00000512881 PRDM15P57071 1507 aaPredicted RBP10.51□□□□□ -0.73
RFC1-215ENST00000512881 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
RFC1-215ENST00000512881 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
RFC1-215ENST00000512881 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
RFC1-215ENST00000512881 GDF9O60383 454 aa10.5□□□□□ -0.73
RFC1-215ENST00000512881 RPIAP49247 311 aa10.5□□□□□ -0.73
RFC1-215ENST00000512881 AK7Q96M32 723 aa10.5□□□□□ -0.73
RFC1-215ENST00000512881 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
RFC1-215ENST00000512881 CPS1P31327 1500 aa10.49□□□□□ -0.73
RFC1-215ENST00000512881 LMTK2Q8IWU2 1503 aa10.49□□□□□ -0.73
RFC1-215ENST00000512881 ITGAEP38570 1179 aa10.49□□□□□ -0.73
RFC1-215ENST00000512881 PCDHGC3Q9UN70 934 aa10.49□□□□□ -0.73
RFC1-215ENST00000512881 TMEM2Q9UHN6 1383 aa10.49□□□□□ -0.73
RFC1-215ENST00000512881 CROCC2H7BZ55 1655 aa10.48□□□□□ -0.73
RFC1-215ENST00000512881 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
RFC1-215ENST00000512881 MS4A1P11836 297 aa10.48□□□□□ -0.73
RFC1-215ENST00000512881 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
RFC1-215ENST00000512881 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
RFC1-215ENST00000512881 ARHGAP23Q9P227 1491 aa10.48□□□□□ -0.73
RFC1-215ENST00000512881 VWDEQ8N2E2 1590 aa10.48□□□□□ -0.73
RFC1-215ENST00000512881 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 FDX1P10109 184 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 HSPA1LP34931 641 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 BEGAINQ9BUH8 593 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 ROCK1Q13464 1354 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 NOS1P29475 1434 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 CEP152O94986 1710 aa10.47□□□□□ -0.73
RFC1-215ENST00000512881 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.73
RFC1-215ENST00000512881 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
RFC1-215ENST00000512881 SLIT1O75093 1534 aa10.46□□□□□ -0.74
RFC1-215ENST00000512881 ILDR2Q71H61 639 aa10.45□□□□□ -0.74
RFC1-215ENST00000512881 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
RFC1-215ENST00000512881 SLC26A8Q96RN1 970 aa10.45□□□□□ -0.74
RFC1-215ENST00000512881 POLR1AO95602 1720 aaPredicted RBP10.44□□□□□ -0.74
RFC1-215ENST00000512881 LRRC7Q96NW7 1537 aa10.44□□□□□ -0.74
RFC1-215ENST00000512881 JUNDP17535 347 aa10.44□□□□□ -0.74
RFC1-215ENST00000512881 NDUFV2P19404 249 aa10.44□□□□□ -0.74
RFC1-215ENST00000512881 PDE4DQ08499 809 aa10.44□□□□□ -0.74
RFC1-215ENST00000512881 BCANQ96GW7 911 aa10.44□□□□□ -0.74
RFC1-215ENST00000512881 NUP155O75694 1391 aa10.43□□□□□ -0.74
RFC1-215ENST00000512881 CFAP65Q6ZU64 1925 aaKnown RBP10.43□□□□□ -0.74
RFC1-215ENST00000512881 KCNA6P17658 529 aa10.43□□□□□ -0.74
RFC1-215ENST00000512881 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
RFC1-215ENST00000512881 IQGAP1P46940 1657 aa10.43□□□□□ -0.74
RFC1-215ENST00000512881 EFCAB6Q5THR3 1501 aa10.43□□□□□ -0.74
RFC1-215ENST00000512881 RPRD2Q5VT52 1461 aaKnown RBP10.42□□□□□ -0.74
RFC1-215ENST00000512881 PIK3C2BO00750 1634 aa10.41□□□□□ -0.74
RFC1-215ENST00000512881 SYNMO15061 1565 aa10.41□□□□□ -0.74
RFC1-215ENST00000512881 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
RFC1-215ENST00000512881 FOXC1Q12948 553 aa10.41□□□□□ -0.74
RFC1-215ENST00000512881 TRIM32Q13049 653 aa10.41□□□□□ -0.74
RFC1-215ENST00000512881 PROSER2Q86WR7 435 aaPredicted RBP10.41□□□□□ -0.74
RFC1-215ENST00000512881 TBC1D2Q9BYX2 928 aa10.41□□□□□ -0.74
RFC1-215ENST00000512881 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
RFC1-215ENST00000512881 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
RFC1-215ENST00000512881 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
RFC1-215ENST00000512881 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
RFC1-215ENST00000512881 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
RFC1-215ENST00000512881 NUTM2DQ5VT03 806 aaPredicted RBP10.39□□□□□ -0.75
RFC1-215ENST00000512881 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
RFC1-215ENST00000512881 RIMS2Q9UQ26 1411 aa10.39□□□□□ -0.75
RFC1-215ENST00000512881 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms