RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRICKLE2Q7Z3G6 844 aa5.47□□□□□ -1.53
PDGFC-208ENST00000512711 CCDC85AQ96PX6 553 aaPredicted RBP5.47□□□□□ -1.53
PDGFC-208ENST00000512711 A0A1W2PRU2 124 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 ERVK-9P63128 1117 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 KRT76Q01546 638 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 RASSF7Q02833 373 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 VWA5B2Q8N398 1253 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 TMEM151AQ8N4L1 468 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 OSBPL3Q9H4L5 887 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 CUEDC1Q9NWM3 386 aaPredicted RBP5.46□□□□□ -1.54
PDGFC-208ENST00000512711 PCDHB11Q9Y5F2 797 aa5.46□□□□□ -1.54
PDGFC-208ENST00000512711 ATP5J2-PTCD1G3V325 749 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 MEN1O00255 615 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 GDF11O95390 407 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 RHOQP17081 205 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 RNF144AP50876 292 aaPredicted RBP5.45□□□□□ -1.54
PDGFC-208ENST00000512711 VAC14Q08AM6 782 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 CC2D2BQ6DHV5 1058 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 PHTF2Q8N3S3 785 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 CNTNAP3BQ96NU0 1288 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 CNTNAP3Q9BZ76 1288 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 ADAMTS8Q9UP79 889 aa5.45□□□□□ -1.54
PDGFC-208ENST00000512711 TRAK2O60296 914 aa5.44□□□□□ -1.54
PDGFC-208ENST00000512711 STAU1O95793 577 aaKnown RBP5.44□□□□□ -1.54
PDGFC-208ENST00000512711 ABL2P42684 1182 aa5.44□□□□□ -1.54
PDGFC-208ENST00000512711 MCCD1P59942 119 aaPredicted RBP5.44□□□□□ -1.54
PDGFC-208ENST00000512711 RNFT1Q5M7Z0 435 aa5.44□□□□□ -1.54
PDGFC-208ENST00000512711 RNF20Q5VTR2 975 aa5.44□□□□□ -1.54
PDGFC-208ENST00000512711 ITGA6P23229 1130 aa5.43□□□□□ -1.54
PDGFC-208ENST00000512711 POU4F2Q12837 409 aa5.43□□□□□ -1.54
PDGFC-208ENST00000512711 LYSMD3Q7Z3D4 306 aa5.43□□□□□ -1.54
PDGFC-208ENST00000512711 NANOS1Q8WY41 292 aaKnown RBP5.43□□□□□ -1.54
PDGFC-208ENST00000512711 RAB6BQ9NRW1 208 aa5.43□□□□□ -1.54
PDGFC-208ENST00000512711 MCM6Q14566 821 aa5.42□□□□□ -1.54
PDGFC-208ENST00000512711 POM121Q96HA1 1249 aa5.42□□□□□ -1.54
PDGFC-208ENST00000512711 COL25A1Q9BXS0 654 aaPredicted RBP5.42□□□□□ -1.54
PDGFC-208ENST00000512711 GRIP2Q9C0E4 1043 aa5.42□□□□□ -1.54
PDGFC-208ENST00000512711 ARHGEF10LQ9HCE6 1279 aa5.42□□□□□ -1.54
PDGFC-208ENST00000512711 ZNF330Q9Y3S2 320 aaPredicted RBP5.42□□□□□ -1.54
PDGFC-208ENST00000512711 CDC14CA4D256 554 aa5.41□□□□□ -1.54
PDGFC-208ENST00000512711 IL2RAP01589 272 aa5.41□□□□□ -1.54
PDGFC-208ENST00000512711 CLN3Q13286 438 aa5.41□□□□□ -1.54
PDGFC-208ENST00000512711 COG6Q9Y2V7 657 aa5.41□□□□□ -1.54
PDGFC-208ENST00000512711 APBB1O00213 710 aa5.4□□□□□ -1.54
PDGFC-208ENST00000512711 CENPCQ03188 943 aa5.4□□□□□ -1.54
PDGFC-208ENST00000512711 DBN1Q16643 649 aa5.4□□□□□ -1.54
PDGFC-208ENST00000512711 ZNF385CQ66K41 422 aaPredicted RBP5.4□□□□□ -1.54
PDGFC-208ENST00000512711 CCDC125Q86Z20 511 aa5.4□□□□□ -1.54
PDGFC-208ENST00000512711 CHIC2Q9UKJ5 165 aa5.4□□□□□ -1.54
PDGFC-208ENST00000512711 EIF4G2P78344 907 aaKnown RBP eCLIP5.39□□□□□ -1.55
PDGFC-208ENST00000512711 SLC27A3Q5K4L6 730 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 SV2AQ7L0J3 742 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 WHAMMQ8TF30 809 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 CNKSR1Q969H4 720 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 NLRP3Q96P20 1036 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 HRH3Q9Y5N1 445 aa5.39□□□□□ -1.55
PDGFC-208ENST00000512711 PIK3CDO00329 1044 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 GNRH1P01148 92 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 GPC1P35052 558 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 SLFNL1Q499Z3 407 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 NBPF10Q6P3W6 841 aaKnown RBP5.38□□□□□ -1.55
PDGFC-208ENST00000512711 CYP2U1Q7Z449 544 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 RNF135Q8IUD6 432 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 NBPF15Q8N660 670 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 XAGE2Q96GT9 111 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 ESYT1Q9BSJ8 1104 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 ESF1Q9H501 851 aaKnown RBP5.38□□□□□ -1.55
PDGFC-208ENST00000512711 PRM3Q9NNZ6 103 aa5.38□□□□□ -1.55
PDGFC-208ENST00000512711 RNF225M0QZC1 329 aaPredicted RBP5.37□□□□□ -1.55
PDGFC-208ENST00000512711 GPR25O00155 361 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 ARHGEF15O94989 841 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 IRS1P35568 1242 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 PHKA2P46019 1235 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 USP4Q13107 963 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 GAS6Q14393 721 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 RIPOR1Q6ZS17 1223 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 SVOPQ8N4V2 548 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 GAS2L1Q99501 681 aaPredicted RBP5.37□□□□□ -1.55
PDGFC-208ENST00000512711 DOLKQ9UPQ8 538 aa5.37□□□□□ -1.55
PDGFC-208ENST00000512711 MYCP01106 439 aaPredicted RBP5.36□□□□□ -1.55
PDGFC-208ENST00000512711 THBS1P07996 1170 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 SEMA3FQ13275 785 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 GPAT2Q6NUI2 795 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 ZNF592Q92610 1267 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 FHDC1Q9C0D6 1143 aaPredicted RBP5.36□□□□□ -1.55
PDGFC-208ENST00000512711 ALG2Q9H553 416 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 ETNK1Q9HBU6 452 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 DYRK1BQ9Y463 629 aa5.36□□□□□ -1.55
PDGFC-208ENST00000512711 POM121CA8CG34 1229 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 SLURP2P0DP57 97 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 WASHC4Q2M389 1173 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 TRIM22Q8IYM9 498 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 ZNF837Q96EG3 531 aaPredicted RBP5.35□□□□□ -1.55
PDGFC-208ENST00000512711 TIMMDC1Q9NPL8 285 aa5.35□□□□□ -1.55
PDGFC-208ENST00000512711 SCNN1DP51172 638 aa5.34□□□□□ -1.55
PDGFC-208ENST00000512711 LYPD4Q6UWN0 246 aa5.34□□□□□ -1.55
PDGFC-208ENST00000512711 ADAMTS19Q8TE59 1207 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms