RNA–Protein interactions for RNA: ENST00000512375.1

MRPS18C-208, Transcript of mitochondrial ribosomal protein S18C, human

TSL 2

Gene MRPS18C, Length 2,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18C-208	ENST00000512375	HDAC1	Q13547	482 aa	Predicted RBP	13.98	□□□□□ -0.17
MRPS18C-208	ENST00000512375	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.98	□□□□□ -0.17
MRPS18C-208	ENST00000512375	MIS18A	Q9NYP9	233 aa		13.97	□□□□□ -0.17
MRPS18C-208	ENST00000512375	NFAT5	O94916	1531 aa		13.97	□□□□□ -0.17
MRPS18C-208	ENST00000512375	RTL1	A6NKG5	1358 aa		13.97	□□□□□ -0.17
MRPS18C-208	ENST00000512375	ZBTB7C	A1YPR0	619 aa		13.96	□□□□□ -0.18
MRPS18C-208	ENST00000512375	ABCC4	O15439	1325 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	VIRMA	Q69YN4	1812 aa	Known RBP	13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	KIAA0232	Q92628	1395 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	PLEKHG5	O94827	1062 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	HAP1	P54257	671 aa	Predicted RBP	13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	USHBP1	Q8N6Y0	703 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	IP6K1	Q92551	441 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	ZBTB7B	O15156	539 aa	Predicted RBP	13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	KCNH5	Q8NCM2	988 aa		13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	API5	Q9BZZ5	524 aa	Known RBP	13.95	□□□□□ -0.18
MRPS18C-208	ENST00000512375	LMOD2	Q6P5Q4	547 aa		13.94	□□□□□ -0.18
MRPS18C-208	ENST00000512375	TSPYL4	Q9UJ04	414 aa		13.94	□□□□□ -0.18
MRPS18C-208	ENST00000512375	GNAT3	A8MTJ3	354 aa		13.93	□□□□□ -0.18
MRPS18C-208	ENST00000512375	C19orf44	Q9H6X5	657 aa		13.93	□□□□□ -0.18
MRPS18C-208	ENST00000512375	SMC5	Q8IY18	1101 aa		13.92	□□□□□ -0.18
MRPS18C-208	ENST00000512375	CHMP4B	Q9H444	224 aa	Known RBP	13.92	□□□□□ -0.18
MRPS18C-208	ENST00000512375	C1orf115	Q9H7X2	142 aa		13.92	□□□□□ -0.18
MRPS18C-208	ENST00000512375	HTATSF1	O43719	755 aa	Known RBP	13.92	□□□□□ -0.18
MRPS18C-208	ENST00000512375	C1orf167	Q5SNV9	1468 aa		13.92	□□□□□ -0.18
MRPS18C-208	ENST00000512375	NBPF6	Q5VWK0	638 aa		13.91	□□□□□ -0.18
MRPS18C-208	ENST00000512375	NBPF4	Q96M43	638 aa		13.91	□□□□□ -0.18
MRPS18C-208	ENST00000512375	MAP3K5	Q99683	1374 aa		13.91	□□□□□ -0.18
MRPS18C-208	ENST00000512375	GC	P02774	474 aa		13.91	□□□□□ -0.18
MRPS18C-208	ENST00000512375	LRRC37A3	O60309	1634 aa		13.9	□□□□□ -0.18
MRPS18C-208	ENST00000512375	KRT28	Q7Z3Y7	464 aa		13.9	□□□□□ -0.18
MRPS18C-208	ENST00000512375	MSH6	P52701	1360 aa		13.9	□□□□□ -0.18
MRPS18C-208	ENST00000512375	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.9	□□□□□ -0.18
MRPS18C-208	ENST00000512375	TMEM94	Q12767	1356 aa		13.9	□□□□□ -0.18
MRPS18C-208	ENST00000512375	RGPD2	P0DJD1	1756 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	IL17RE	Q8NFR9	667 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	DDRGK1	Q96HY6	314 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	KIF1A	Q12756	1690 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	RGS12	O14924	1447 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	SLIT3	O75094	1523 aa		13.89	□□□□□ -0.19
MRPS18C-208	ENST00000512375	STRCP1	A6NGW2	1772 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	SEC24B	O95487	1268 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	ATF3	P18847	181 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	HSPA2	P54652	639 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	ARHGEF25	Q86VW2	580 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	LRRC59	Q96AG4	307 aa	Known RBP	13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	PTPRC	P08575	1304 aa		13.88	□□□□□ -0.19
MRPS18C-208	ENST00000512375	INTS3	Q68E01	1043 aa	Known RBP	13.87	□□□□□ -0.19
MRPS18C-208	ENST00000512375	NUCB1	Q02818	461 aa		13.87	□□□□□ -0.19
MRPS18C-208	ENST00000512375	USP19	O94966	1318 aa		13.87	□□□□□ -0.19
MRPS18C-208	ENST00000512375	SIRT2	Q8IXJ6	389 aa		13.86	□□□□□ -0.19
MRPS18C-208	ENST00000512375	MST1R	Q04912	1400 aa		13.86	□□□□□ -0.19
MRPS18C-208	ENST00000512375	LNPK	Q9C0E8	428 aa		13.86	□□□□□ -0.19
MRPS18C-208	ENST00000512375	TAF7	Q15545	349 aa	Predicted RBP	13.85	□□□□□ -0.19
MRPS18C-208	ENST00000512375	G2E3	Q7L622	706 aa		13.85	□□□□□ -0.19
MRPS18C-208	ENST00000512375	CHD1L	Q86WJ1	897 aa		13.85	□□□□□ -0.19
MRPS18C-208	ENST00000512375	DDX17	Q92841	729 aa	Known RBP	13.85	□□□□□ -0.19
MRPS18C-208	ENST00000512375	GCC1	Q96CN9	775 aa		13.85	□□□□□ -0.19
MRPS18C-208	ENST00000512375	ANKRD24	Q8TF21	1146 aa		13.84	□□□□□ -0.19
MRPS18C-208	ENST00000512375	STK31	Q9BXU1	1019 aa		13.84	□□□□□ -0.19
MRPS18C-208	ENST00000512375	AXIN2	Q9Y2T1	843 aa		13.84	□□□□□ -0.19
MRPS18C-208	ENST00000512375	CEMIP	Q8WUJ3	1361 aa		13.83	□□□□□ -0.19
MRPS18C-208	ENST00000512375	DCC	P43146	1447 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ANKRD45	Q5TZF3	282 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	NECTIN2	Q92692	538 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	BABAM1	Q9NWV8	329 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ALS2	Q96Q42	1657 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ZC3H6	P61129	1189 aa	Known RBP	13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375	LGR6	Q9HBX8	967 aa		13.83	□□□□□ -0.2
MRPS18C-208	ENST00000512375		F6X3S4	739 aa		13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	SLC4A3	P48751	1232 aa		13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CCDC30	Q5VVM6	783 aa		13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	SLC4A10	Q6U841	1118 aa		13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	FAM208A	Q9UK61	1670 aa	Known RBP	13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	RGPD5	Q99666	1765 aa		13.82	□□□□□ -0.2
MRPS18C-208	ENST00000512375	MED1	Q15648	1581 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CADPS2	Q86UW7	1296 aa		13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	MEIS3	Q99687	375 aa		13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	UPF2	Q9HAU5	1272 aa	Known RBP	13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	NCOA3	Q9Y6Q9	1424 aa		13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	NBR1	Q14596	966 aa		13.81	□□□□□ -0.2
MRPS18C-208	ENST00000512375	NCAPD2	Q15021	1401 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ATP10D	Q9P241	1426 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CACNA1F	O60840	1977 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	FLII	Q13045	1269 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	AMOT	Q4VCS5	1084 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	AKAP4	Q5JQC9	854 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	LMO7	Q8WWI1	1683 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	FKBP5	Q13451	457 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	MPRIP	Q6WCQ1	1025 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	SOS1	Q07889	1333 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	PXDN	Q92626	1479 aa		13.8	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ERBB3	P21860	1342 aa		13.79	□□□□□ -0.2
MRPS18C-208	ENST00000512375	NPHP3	Q7Z494	1330 aa		13.79	□□□□□ -0.2
MRPS18C-208	ENST00000512375	ANKRD44	Q8N8A2	993 aa		13.79	□□□□□ -0.2
MRPS18C-208	ENST00000512375	CCT4	P50991	539 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms