RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
DDX41-214ENST00000512334 MTHFSP49914 203 aa21.57■■□□□ 1.04
DDX41-214ENST00000512334 PTF1AQ7RTS3 328 aa21.57■■□□□ 1.04
DDX41-214ENST00000512334 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
DDX41-214ENST00000512334 SHANK3Q9BYB0 1731 aa21.56■■□□□ 1.04
DDX41-214ENST00000512334 CAMKK2Q96RR4 588 aa21.56■■□□□ 1.04
DDX41-214ENST00000512334 NCAPD2Q15021 1401 aa21.55■■□□□ 1.04
DDX41-214ENST00000512334 KCNQ2O43526 872 aa21.55■■□□□ 1.04
DDX41-214ENST00000512334 PARD3Q8TEW0 1356 aa21.54■■□□□ 1.04
DDX41-214ENST00000512334 IGSF1Q8N6C5 1336 aa21.54■■□□□ 1.04
DDX41-214ENST00000512334 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
DDX41-214ENST00000512334 PCDH11XQ9BZA7 1347 aa21.53■■□□□ 1.04
DDX41-214ENST00000512334 PCDH11YQ9BZA8 1340 aa21.53■■□□□ 1.04
DDX41-214ENST00000512334 SYTL4Q96C24 671 aaPredicted RBP21.51■■□□□ 1.03
DDX41-214ENST00000512334 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
DDX41-214ENST00000512334 PLSCR1O15162 318 aa21.5■■□□□ 1.03
DDX41-214ENST00000512334 IL13P35225 146 aa21.5■■□□□ 1.03
DDX41-214ENST00000512334 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
DDX41-214ENST00000512334 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
DDX41-214ENST00000512334 RREB1Q92766 1687 aa21.48■■□□□ 1.03
DDX41-214ENST00000512334 RGPD3A6NKT7 1758 aaPredicted RBP21.48■■□□□ 1.03
DDX41-214ENST00000512334 RGPD4Q7Z3J3 1758 aa21.48■■□□□ 1.03
DDX41-214ENST00000512334 CYP27B1O15528 508 aa21.47■■□□□ 1.03
DDX41-214ENST00000512334 DIAPH1O60610 1272 aaKnown RBP21.47■■□□□ 1.03
DDX41-214ENST00000512334 PRIM1P49642 420 aaKnown RBP21.47■■□□□ 1.03
DDX41-214ENST00000512334 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
DDX41-214ENST00000512334 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
DDX41-214ENST00000512334 AEBP1Q8IUX7 1158 aa21.47■■□□□ 1.03
DDX41-214ENST00000512334 BTAF1O14981 1849 aa21.47■■□□□ 1.03
DDX41-214ENST00000512334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.46■■□□□ 1.03
DDX41-214ENST00000512334 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
DDX41-214ENST00000512334 PSDA5PKW4 1024 aaPredicted RBP21.45■■□□□ 1.02
DDX41-214ENST00000512334 NBPF14Q5TI25 921 aa21.44■■□□□ 1.02
DDX41-214ENST00000512334 PPP2R1AP30153 589 aa21.43■■□□□ 1.02
DDX41-214ENST00000512334 R3HDM1Q15032 1099 aaKnown RBP21.43■■□□□ 1.02
DDX41-214ENST00000512334 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
DDX41-214ENST00000512334 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
DDX41-214ENST00000512334 CFAP53Q96M91 514 aa21.43■■□□□ 1.02
DDX41-214ENST00000512334 HMOX1P09601 288 aa21.42■■□□□ 1.02
DDX41-214ENST00000512334 IFNL2Q8IZJ0 200 aa21.42■■□□□ 1.02
DDX41-214ENST00000512334 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
DDX41-214ENST00000512334 COL3A1P02461 1466 aaPredicted RBP21.41■■□□□ 1.02
DDX41-214ENST00000512334 KDRP35968 1356 aa21.41■■□□□ 1.02
DDX41-214ENST00000512334 U2SURPO15042 1029 aaKnown RBP21.41■■□□□ 1.02
DDX41-214ENST00000512334 PROM2Q8N271 834 aa21.41■■□□□ 1.02
DDX41-214ENST00000512334 PHKG2P15735 406 aa21.4■■□□□ 1.02
DDX41-214ENST00000512334 AMOTQ4VCS5 1084 aa21.4■■□□□ 1.02
DDX41-214ENST00000512334 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
DDX41-214ENST00000512334 ZNF530Q6P9A1 599 aaPredicted RBP21.39■■□□□ 1.01
DDX41-214ENST00000512334 MPRIPQ6WCQ1 1025 aa21.39■■□□□ 1.01
DDX41-214ENST00000512334 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
DDX41-214ENST00000512334 C1orf141Q5JVX7 400 aa21.37■■□□□ 1.01
DDX41-214ENST00000512334 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
DDX41-214ENST00000512334 ITGB4P16144 1822 aa21.35■■□□□ 1.01
DDX41-214ENST00000512334 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
DDX41-214ENST00000512334 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
DDX41-214ENST00000512334 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
DDX41-214ENST00000512334 TMOD3Q9NYL9 352 aa21.34■■□□□ 1.01
DDX41-214ENST00000512334 RALBP1Q15311 655 aa21.32■■□□□ 1
DDX41-214ENST00000512334 SLC27A3Q5K4L6 730 aa21.32■■□□□ 1
DDX41-214ENST00000512334 PIGBQ92521 554 aa21.32■■□□□ 1
DDX41-214ENST00000512334 DCAF5Q96JK2 942 aa21.32■■□□□ 1
DDX41-214ENST00000512334 KCNQ4P56696 695 aa21.31■■□□□ 1
DDX41-214ENST00000512334 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
DDX41-214ENST00000512334 CCNL1Q9UK58 526 aaPredicted RBP21.31■■□□□ 1
DDX41-214ENST00000512334 LY75O60449 1722 aa21.3■■□□□ 1
DDX41-214ENST00000512334 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
DDX41-214ENST00000512334 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
DDX41-214ENST00000512334 PALLDQ8WX93 1383 aa21.3■■□□□ 1
DDX41-214ENST00000512334 AKAP4Q5JQC9 854 aa21.29■■□□□ 1
DDX41-214ENST00000512334 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
DDX41-214ENST00000512334 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
DDX41-214ENST00000512334 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
DDX41-214ENST00000512334 SLC15A2Q16348 729 aa21.28■■□□□ 1
DDX41-214ENST00000512334 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
DDX41-214ENST00000512334 PAPPAQ13219 1627 aa21.27■■□□□ 1
DDX41-214ENST00000512334 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
DDX41-214ENST00000512334 CABP4P57796 275 aa21.27■■□□□ 1
DDX41-214ENST00000512334 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
DDX41-214ENST00000512334 ZNF827Q17R98 1081 aa21.25■□□□□ 0.99
DDX41-214ENST00000512334 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
DDX41-214ENST00000512334 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
DDX41-214ENST00000512334 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
DDX41-214ENST00000512334 ATG3Q9NT62 314 aa21.23■□□□□ 0.99
DDX41-214ENST00000512334 MYBBP1AQ9BQG0 1328 aaKnown RBP21.23■□□□□ 0.99
DDX41-214ENST00000512334 SCN11AQ9UI33 1791 aa21.23■□□□□ 0.99
DDX41-214ENST00000512334 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
DDX41-214ENST00000512334 RNMTO43148 476 aaKnown RBP21.21■□□□□ 0.99
DDX41-214ENST00000512334 FCHSD2O94868 740 aa21.21■□□□□ 0.99
DDX41-214ENST00000512334 NFATC2IPQ8NCF5 419 aa21.21■□□□□ 0.99
DDX41-214ENST00000512334 AKT1S1Q96B36 256 aa21.21■□□□□ 0.99
DDX41-214ENST00000512334 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
DDX41-214ENST00000512334 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
DDX41-214ENST00000512334 LRP5O75197 1615 aa21.21■□□□□ 0.99
DDX41-214ENST00000512334 LOC102724428A0A0B4J2F2 783 aa21.2■□□□□ 0.98
DDX41-214ENST00000512334 SIK1P57059 783 aa21.2■□□□□ 0.98
DDX41-214ENST00000512334 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
DDX41-214ENST00000512334 C5P01031 1676 aa21.2■□□□□ 0.98
DDX41-214ENST00000512334 CASZ1Q86V15 1759 aa21.19■□□□□ 0.98
DDX41-214ENST00000512334 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms