RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.11■□□□□ 0.81
LETM1-206ENST00000512189 IL16Q14005 1332 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 AMOTQ4VCS5 1084 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 RAPGEF4Q8WZA2 1011 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 WNK3Q9BYP7 1800 aa20.11■□□□□ 0.81
LETM1-206ENST00000512189 TATP17735 454 aaPredicted RBP20.1■□□□□ 0.81
LETM1-206ENST00000512189 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
LETM1-206ENST00000512189 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
LETM1-206ENST00000512189 E9PSI1 815 aa20.09■□□□□ 0.81
LETM1-206ENST00000512189 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
LETM1-206ENST00000512189 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
LETM1-206ENST00000512189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
LETM1-206ENST00000512189 BCL9LQ86UU0 1499 aa20.09■□□□□ 0.81
LETM1-206ENST00000512189 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
LETM1-206ENST00000512189 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.81
LETM1-206ENST00000512189 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
LETM1-206ENST00000512189 FNBP4Q8N3X1 1017 aaPredicted RBP20.07■□□□□ 0.8
LETM1-206ENST00000512189 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
LETM1-206ENST00000512189 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
LETM1-206ENST00000512189 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
LETM1-206ENST00000512189 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 IL2RBP14784 551 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 UNC5CLQ8IV45 518 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 FBXO41Q8TF61 875 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 SHANK3Q9BYB0 1731 aa20.05■□□□□ 0.8
LETM1-206ENST00000512189 SPATA31A1Q5TZJ5 1347 aa20.04■□□□□ 0.8
LETM1-206ENST00000512189 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
LETM1-206ENST00000512189 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
LETM1-206ENST00000512189 CEMIPQ8WUJ3 1361 aa20.04■□□□□ 0.8
LETM1-206ENST00000512189 SPATA31A5Q5VU36 1347 aa20.03■□□□□ 0.8
LETM1-206ENST00000512189 SPATA31A7Q8IWB4 1347 aa20.03■□□□□ 0.8
LETM1-206ENST00000512189 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
LETM1-206ENST00000512189 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
LETM1-206ENST00000512189 MCM10Q7L590 875 aa20.02■□□□□ 0.8
LETM1-206ENST00000512189 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
LETM1-206ENST00000512189 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.8
LETM1-206ENST00000512189 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
LETM1-206ENST00000512189 THRAP3Q9Y2W1 955 aaKnown RBP20.02■□□□□ 0.8
LETM1-206ENST00000512189 ZNF853P0CG23 659 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 VPS72Q15906 364 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
LETM1-206ENST00000512189 TNS2Q63HR2 1409 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
LETM1-206ENST00000512189 MRC1P22897 1456 aa20■□□□□ 0.79
LETM1-206ENST00000512189 PHKG2P15735 406 aa20■□□□□ 0.79
LETM1-206ENST00000512189 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
LETM1-206ENST00000512189 IL17REQ8NFR9 667 aa19.99■□□□□ 0.79
LETM1-206ENST00000512189 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
LETM1-206ENST00000512189 CYP27B1O15528 508 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 GNAI1P63096 354 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 BARGINQ6ZT62 677 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
LETM1-206ENST00000512189 CFAP44Q96MT7 982 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 CDCA7Q9BWT1 371 aaPredicted RBP19.98■□□□□ 0.79
LETM1-206ENST00000512189 USP21Q9UK80 565 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 ATRNO75882 1429 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 AFF2P51816 1311 aa19.98■□□□□ 0.79
LETM1-206ENST00000512189 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
LETM1-206ENST00000512189 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
LETM1-206ENST00000512189 GLI3P10071 1580 aa19.95■□□□□ 0.78
LETM1-206ENST00000512189 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
LETM1-206ENST00000512189 THSD7AQ9UPZ6 1657 aa19.95■□□□□ 0.78
LETM1-206ENST00000512189 CHL1O00533 1208 aa19.95■□□□□ 0.78
LETM1-206ENST00000512189 MBIPQ9NS73 344 aa19.95■□□□□ 0.78
LETM1-206ENST00000512189 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
LETM1-206ENST00000512189 HSP90AB1P08238 724 aaKnown RBP19.94■□□□□ 0.78
LETM1-206ENST00000512189 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
LETM1-206ENST00000512189 LGR6Q9HBX8 967 aa19.94■□□□□ 0.78
LETM1-206ENST00000512189 NKX1-1Q15270 411 aaPredicted RBP19.93■□□□□ 0.78
LETM1-206ENST00000512189 DCAF5Q96JK2 942 aa19.93■□□□□ 0.78
LETM1-206ENST00000512189 BABAM1Q9NWV8 329 aa19.93■□□□□ 0.78
LETM1-206ENST00000512189 CCDC9Q9Y3X0 531 aaKnown RBP19.93■□□□□ 0.78
LETM1-206ENST00000512189 VIRMAQ69YN4 1812 aaKnown RBP19.92■□□□□ 0.78
LETM1-206ENST00000512189 LAS1LQ9Y4W2 734 aaKnown RBP19.92■□□□□ 0.78
LETM1-206ENST00000512189 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
LETM1-206ENST00000512189 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
LETM1-206ENST00000512189 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
LETM1-206ENST00000512189 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
LETM1-206ENST00000512189 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.77
LETM1-206ENST00000512189 TEFQ10587 303 aa19.89■□□□□ 0.77
LETM1-206ENST00000512189 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
LETM1-206ENST00000512189 RNF123Q5XPI4 1314 aa19.89■□□□□ 0.77
LETM1-206ENST00000512189 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
LETM1-206ENST00000512189 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
LETM1-206ENST00000512189 EXOC5O00471 708 aa19.87■□□□□ 0.77
LETM1-206ENST00000512189 DDB1Q16531 1140 aa19.87■□□□□ 0.77
LETM1-206ENST00000512189 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
LETM1-206ENST00000512189 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
LETM1-206ENST00000512189 SLC52A2Q9HAB3 445 aa19.87■□□□□ 0.77
LETM1-206ENST00000512189 FAM98CQ17RN3 349 aaKnown RBP19.86■□□□□ 0.77
LETM1-206ENST00000512189 PAPPAQ13219 1627 aa19.86■□□□□ 0.77
LETM1-206ENST00000512189 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms