RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
SNCAIP-216ENST00000512146 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
SNCAIP-216ENST00000512146 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.6
SNCAIP-216ENST00000512146 IP6K1Q92551 441 aa18.77■□□□□ 0.6
SNCAIP-216ENST00000512146 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.6
SNCAIP-216ENST00000512146 USP19O94966 1318 aa18.77■□□□□ 0.6
SNCAIP-216ENST00000512146 PSME1Q06323 249 aa18.76■□□□□ 0.59
SNCAIP-216ENST00000512146 KCNH5Q8NCM2 988 aa18.76■□□□□ 0.59
SNCAIP-216ENST00000512146 RGS12O14924 1447 aa18.75■□□□□ 0.59
SNCAIP-216ENST00000512146 LRRC37A3O60309 1634 aa18.75■□□□□ 0.59
SNCAIP-216ENST00000512146 KRT24Q2M2I5 525 aa18.75■□□□□ 0.59
SNCAIP-216ENST00000512146 INTS3Q68E01 1043 aaKnown RBP18.75■□□□□ 0.59
SNCAIP-216ENST00000512146 PHRF1Q9P1Y6 1649 aaKnown RBP18.75■□□□□ 0.59
SNCAIP-216ENST00000512146 NUCB1Q02818 461 aa18.74■□□□□ 0.59
SNCAIP-216ENST00000512146 PTPRCP08575 1304 aa18.74■□□□□ 0.59
SNCAIP-216ENST00000512146 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
SNCAIP-216ENST00000512146 GNAT3A8MTJ3 354 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 SEC24BO95487 1268 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 TSPYL4Q9UJ04 414 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 MSH6P52701 1360 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 MAP3K5Q99683 1374 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 MST1RQ04912 1400 aa18.72■□□□□ 0.59
SNCAIP-216ENST00000512146 SLIT3O75094 1523 aa18.71■□□□□ 0.59
SNCAIP-216ENST00000512146 C14orf37Q86TY3 774 aa18.71■□□□□ 0.59
SNCAIP-216ENST00000512146 ORAI2Q96SN7 254 aa18.71■□□□□ 0.59
SNCAIP-216ENST00000512146 SOS1Q07889 1333 aaPredicted RBP18.7■□□□□ 0.58
SNCAIP-216ENST00000512146 SIRT2Q8IXJ6 389 aa18.7■□□□□ 0.58
SNCAIP-216ENST00000512146 PROSER2Q86WR7 435 aaPredicted RBP18.7■□□□□ 0.58
SNCAIP-216ENST00000512146 C19orf44Q9H6X5 657 aa18.7■□□□□ 0.58
SNCAIP-216ENST00000512146 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
SNCAIP-216ENST00000512146 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
SNCAIP-216ENST00000512146 LTN1O94822 1766 aa18.69■□□□□ 0.58
SNCAIP-216ENST00000512146 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
SNCAIP-216ENST00000512146 NCAPD2Q15021 1401 aa18.68■□□□□ 0.58
SNCAIP-216ENST00000512146 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
SNCAIP-216ENST00000512146 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
SNCAIP-216ENST00000512146 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
SNCAIP-216ENST00000512146 GCP02774 474 aa18.67■□□□□ 0.58
SNCAIP-216ENST00000512146 NBPF6Q5VWK0 638 aa18.67■□□□□ 0.58
SNCAIP-216ENST00000512146 NBPF4Q96M43 638 aa18.67■□□□□ 0.58
SNCAIP-216ENST00000512146 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
SNCAIP-216ENST00000512146 CEMIPQ8WUJ3 1361 aa18.66■□□□□ 0.58
SNCAIP-216ENST00000512146 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
SNCAIP-216ENST00000512146 C1orf115Q9H7X2 142 aa18.66■□□□□ 0.58
SNCAIP-216ENST00000512146 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
SNCAIP-216ENST00000512146 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
SNCAIP-216ENST00000512146 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
SNCAIP-216ENST00000512146 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
SNCAIP-216ENST00000512146 DCCP43146 1447 aa18.64■□□□□ 0.57
SNCAIP-216ENST00000512146 ATP10DQ9P241 1426 aa18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 KRT28Q7Z3Y7 464 aa18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 LNPKQ9C0E8 428 aa18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
SNCAIP-216ENST00000512146 RPAP2Q8IXW5 612 aaPredicted RBP18.62■□□□□ 0.57
SNCAIP-216ENST00000512146 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
SNCAIP-216ENST00000512146 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
SNCAIP-216ENST00000512146 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
SNCAIP-216ENST00000512146 BMP2KLQ5H9B9 411 aa18.6■□□□□ 0.57
SNCAIP-216ENST00000512146 ANKRD45Q5TZF3 282 aa18.6■□□□□ 0.57
SNCAIP-216ENST00000512146 G2E3Q7L622 706 aa18.6■□□□□ 0.57
SNCAIP-216ENST00000512146 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
SNCAIP-216ENST00000512146 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
SNCAIP-216ENST00000512146 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
SNCAIP-216ENST00000512146 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.57
SNCAIP-216ENST00000512146 CEP85Q6P2H3 762 aa18.58■□□□□ 0.57
SNCAIP-216ENST00000512146 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.57
SNCAIP-216ENST00000512146 CAMTA1Q9Y6Y1 1673 aa18.58■□□□□ 0.57
SNCAIP-216ENST00000512146 AKAP4Q5JQC9 854 aa18.58■□□□□ 0.56
SNCAIP-216ENST00000512146 ALS2Q96Q42 1657 aa18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 LMTK3Q96Q04 1460 aa18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 SLC4A3P48751 1232 aa18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 LRRC59Q96AG4 307 aaKnown RBP18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 MEIS3Q99687 375 aa18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
SNCAIP-216ENST00000512146 HOXB7P09629 217 aa18.56■□□□□ 0.56
SNCAIP-216ENST00000512146 ATF3P18847 181 aa18.56■□□□□ 0.56
SNCAIP-216ENST00000512146 FLIIQ13045 1269 aa18.56■□□□□ 0.56
SNCAIP-216ENST00000512146 NBR1Q14596 966 aa18.56■□□□□ 0.56
SNCAIP-216ENST00000512146 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
SNCAIP-216ENST00000512146 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
SNCAIP-216ENST00000512146 FAM208AQ9UK61 1670 aaKnown RBP18.55■□□□□ 0.56
SNCAIP-216ENST00000512146 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
SNCAIP-216ENST00000512146 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
SNCAIP-216ENST00000512146 AXIN2Q9Y2T1 843 aa18.54■□□□□ 0.56
SNCAIP-216ENST00000512146 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
SNCAIP-216ENST00000512146 F6X3S4 739 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 PXDNLA1KZ92 1463 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 BECN1Q14457 450 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 CHMP4AQ9BY43 222 aa18.53■□□□□ 0.56
SNCAIP-216ENST00000512146 RGPD2P0DJD1 1756 aa18.52■□□□□ 0.56
SNCAIP-216ENST00000512146 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms