RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 DCCP43146 1447 aa10.67□□□□□ -0.7
HTT-209ENST00000512068 TMEM94Q12767 1356 aa10.67□□□□□ -0.7
HTT-209ENST00000512068 POTEB2H3BUK9 544 aa10.67□□□□□ -0.7
HTT-209ENST00000512068 NEFMP07197 916 aa10.67□□□□□ -0.7
HTT-209ENST00000512068 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
HTT-209ENST00000512068 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
HTT-209ENST00000512068 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
HTT-209ENST00000512068 PSME1Q06323 249 aa10.66□□□□□ -0.7
HTT-209ENST00000512068 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
HTT-209ENST00000512068 STRCP1A6NGW2 1772 aa10.66□□□□□ -0.7
HTT-209ENST00000512068 SHPRHQ149N8 1683 aa10.66□□□□□ -0.7
HTT-209ENST00000512068 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
HTT-209ENST00000512068 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
HTT-209ENST00000512068 U2AF1L5P0DN76 240 aaPredicted RBP10.65□□□□□ -0.7
HTT-209ENST00000512068 U2AF1Q01081 240 aaKnown RBP eCLIP10.65□□□□□ -0.7
HTT-209ENST00000512068 PDE3BQ13370 1112 aa10.65□□□□□ -0.7
HTT-209ENST00000512068 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
HTT-209ENST00000512068 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
HTT-209ENST00000512068 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 CDK12Q9NYV4 1490 aaPredicted RBP10.64□□□□□ -0.71
HTT-209ENST00000512068 CCDC146Q8IYE0 955 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 ABTB2Q8N961 1025 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 OVOS2A0A0J9YW53 1432 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 OVOS2Q6IE36 1432 aa10.64□□□□□ -0.71
HTT-209ENST00000512068 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
HTT-209ENST00000512068 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
HTT-209ENST00000512068 PIK3C2AO00443 1686 aa10.63□□□□□ -0.71
HTT-209ENST00000512068 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
HTT-209ENST00000512068 SMG6Q86US8 1419 aaKnown RBP10.62□□□□□ -0.71
HTT-209ENST00000512068 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
HTT-209ENST00000512068 POLKQ9UBT6 870 aa10.62□□□□□ -0.71
HTT-209ENST00000512068 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
HTT-209ENST00000512068 USP54Q70EL1 1684 aa10.61□□□□□ -0.71
HTT-209ENST00000512068 AMPHP49418 695 aa10.61□□□□□ -0.71
HTT-209ENST00000512068 RRS1Q15050 365 aaKnown RBP10.61□□□□□ -0.71
HTT-209ENST00000512068 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
HTT-209ENST00000512068 LRRC7Q96NW7 1537 aa10.61□□□□□ -0.71
HTT-209ENST00000512068 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
HTT-209ENST00000512068 ZNF335Q9H4Z2 1342 aaPredicted RBP10.6□□□□□ -0.71
HTT-209ENST00000512068 MST1RQ04912 1400 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 APAF1O14727 1248 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 MAMSTRQ6ZN01 415 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 ORAI2Q96SN7 254 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 PNPLA6Q8IY17 1366 aa10.6□□□□□ -0.71
HTT-209ENST00000512068 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
HTT-209ENST00000512068 FOXO3O43524 673 aa10.59□□□□□ -0.71
HTT-209ENST00000512068 NUTM2GQ5VZR2 741 aa10.59□□□□□ -0.71
HTT-209ENST00000512068 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
HTT-209ENST00000512068 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.71
HTT-209ENST00000512068 SBNO1A3KN83 1393 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 FLT4P35916 1363 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 DPYSL4O14531 572 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 SCUBE2Q9NQ36 999 aa10.58□□□□□ -0.72
HTT-209ENST00000512068 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
HTT-209ENST00000512068 SEMA3EO15041 775 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 FCHSD2O94868 740 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 SLC34A2O95436 690 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 FBLN1P23142 703 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 LTN1O94822 1766 aa10.57□□□□□ -0.72
HTT-209ENST00000512068 RTL1A6NKG5 1358 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 KIF24Q5T7B8 1368 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
HTT-209ENST00000512068 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
HTT-209ENST00000512068 PDIA6Q15084 440 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
HTT-209ENST00000512068 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
HTT-209ENST00000512068 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
HTT-209ENST00000512068 TRPM3Q9HCF6 1732 aaPredicted RBP10.55□□□□□ -0.72
HTT-209ENST00000512068 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
HTT-209ENST00000512068 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
HTT-209ENST00000512068 E9PSI1 815 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 HMOX1P09601 288 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 IL13P35225 146 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 PEAK1Q9H792 1746 aa10.54□□□□□ -0.72
HTT-209ENST00000512068 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
HTT-209ENST00000512068 TNS3Q68CZ2 1445 aa10.53□□□□□ -0.72
HTT-209ENST00000512068 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
HTT-209ENST00000512068 EIF4A2Q14240 407 aaKnown RBP10.53□□□□□ -0.72
HTT-209ENST00000512068 CCDC27Q2M243 656 aa10.53□□□□□ -0.72
HTT-209ENST00000512068 SLAIN2Q9P270 581 aa10.53□□□□□ -0.72
HTT-209ENST00000512068 ARHGEF10O15013 1369 aa10.52□□□□□ -0.72
HTT-209ENST00000512068 HOXC9P31274 260 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
HTT-209ENST00000512068 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 SLAIN1Q8ND83 568 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.73
HTT-209ENST00000512068 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 MYH16Q9H6N6 1097 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 ALS2Q96Q42 1657 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 SLIT3O75094 1523 aa10.52□□□□□ -0.73
HTT-209ENST00000512068 TMPOP42166 694 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms