RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 LNPKQ9C0E8 428 aa25.85■■□□□ 1.73
SPOCK3-219ENST00000511905 RGPD8O14715 1765 aaPredicted RBP25.84■■□□□ 1.73
SPOCK3-219ENST00000511905 NUTM2FA1L443 756 aa25.84■■□□□ 1.73
SPOCK3-219ENST00000511905 RPAP2Q8IXW5 612 aaPredicted RBP25.84■■□□□ 1.73
SPOCK3-219ENST00000511905 ANKRD45Q5TZF3 282 aa25.83■■□□□ 1.73
SPOCK3-219ENST00000511905 BABAM1Q9NWV8 329 aa25.83■■□□□ 1.73
SPOCK3-219ENST00000511905 GSE1Q14687 1217 aa25.83■■□□□ 1.72
SPOCK3-219ENST00000511905 DCTPP1Q9H773 170 aa25.83■■□□□ 1.72
SPOCK3-219ENST00000511905 LRRC37A3O60309 1634 aa25.82■■□□□ 1.72
SPOCK3-219ENST00000511905 AMPHP49418 695 aa25.82■■□□□ 1.72
SPOCK3-219ENST00000511905 RTF1Q92541 710 aaKnown RBP25.82■■□□□ 1.72
SPOCK3-219ENST00000511905 RTL1A6NKG5 1358 aa25.81■■□□□ 1.72
SPOCK3-219ENST00000511905 MCM10Q7L590 875 aa25.81■■□□□ 1.72
SPOCK3-219ENST00000511905 ANKRD44Q8N8A2 993 aa25.81■■□□□ 1.72
SPOCK3-219ENST00000511905 MARF1Q9Y4F3 1742 aaKnown RBP25.81■■□□□ 1.72
SPOCK3-219ENST00000511905 MFAP1P55081 439 aaKnown RBP25.8■■□□□ 1.72
SPOCK3-219ENST00000511905 MTHFSDQ2M296 383 aaKnown RBP25.8■■□□□ 1.72
SPOCK3-219ENST00000511905 EYA1Q99502 592 aa25.8■■□□□ 1.72
SPOCK3-219ENST00000511905 SNX21Q969T3 373 aa25.79■■□□□ 1.72
SPOCK3-219ENST00000511905 KCNA6P17658 529 aa25.78■■□□□ 1.72
SPOCK3-219ENST00000511905 FRAT2O75474 233 aaPredicted RBP25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 ATP10DQ9P241 1426 aa25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 CHD2O14647 1828 aaKnown RBP25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 PLPPR3Q6T4P5 718 aa25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 C1orf115Q9H7X2 142 aa25.77■■□□□ 1.72
SPOCK3-219ENST00000511905 NLRP6P59044 892 aa25.76■■□□□ 1.71
SPOCK3-219ENST00000511905 NWD1Q149M9 1564 aa25.76■■□□□ 1.71
SPOCK3-219ENST00000511905 HOXC9P31274 260 aa25.75■■□□□ 1.71
SPOCK3-219ENST00000511905 TSPYL4Q9UJ04 414 aa25.74■■□□□ 1.71
SPOCK3-219ENST00000511905 CCT4P50991 539 aaKnown RBP25.73■■□□□ 1.71
SPOCK3-219ENST00000511905 CEP85Q6P2H3 762 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 ANKLE2Q86XL3 938 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 GNAT3A8MTJ3 354 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 KRT24Q2M2I5 525 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 HSCBQ8IWL3 235 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 NCOA3Q9Y6Q9 1424 aa25.71■■□□□ 1.71
SPOCK3-219ENST00000511905 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
SPOCK3-219ENST00000511905 CDC45O75419 566 aa25.69■■□□□ 1.7
SPOCK3-219ENST00000511905 PLEKHM2Q8IWE5 1019 aa25.69■■□□□ 1.7
SPOCK3-219ENST00000511905 CHMP5Q9NZZ3 219 aa25.69■■□□□ 1.7
SPOCK3-219ENST00000511905 PHF8Q9UPP1 1060 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 MSH6P52701 1360 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 PHRF1Q9P1Y6 1649 aaKnown RBP25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 SOX12O15370 315 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 FOXO3O43524 673 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 HMMRO75330 724 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 SLKQ9H2G2 1235 aaPredicted RBP25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 CACNA1FO60840 1977 aa25.68■■□□□ 1.7
SPOCK3-219ENST00000511905 MAP3K5Q99683 1374 aa25.67■■□□□ 1.7
SPOCK3-219ENST00000511905 TBC1D9Q6ZT07 1266 aa25.67■■□□□ 1.7
SPOCK3-219ENST00000511905 ABTB2Q8N961 1025 aa25.67■■□□□ 1.7
SPOCK3-219ENST00000511905 CCDC30Q5VVM6 783 aa25.66■■□□□ 1.7
SPOCK3-219ENST00000511905 STK31Q9BXU1 1019 aa25.66■■□□□ 1.7
SPOCK3-219ENST00000511905 ADGRL3Q9HAR2 1447 aa25.65■■□□□ 1.7
SPOCK3-219ENST00000511905 TTC22Q5TAA0 569 aa25.65■■□□□ 1.7
SPOCK3-219ENST00000511905 IP6K1Q92551 441 aa25.64■■□□□ 1.7
SPOCK3-219ENST00000511905 CHMP4AQ9BY43 222 aa25.64■■□□□ 1.7
SPOCK3-219ENST00000511905 PXDNLA1KZ92 1463 aa25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 NFAT5O94916 1531 aa25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 N4BP2Q86UW6 1770 aaPredicted RBP25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 CIZ1Q9ULV3 898 aaPredicted RBP25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 FAM208AQ9UK61 1670 aaKnown RBP25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 TAF7Q15545 349 aaPredicted RBP25.63■■□□□ 1.69
SPOCK3-219ENST00000511905 MEIS3Q99687 375 aa25.62■■□□□ 1.69
SPOCK3-219ENST00000511905 DDIT3P35638 169 aa25.61■■□□□ 1.69
SPOCK3-219ENST00000511905 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
SPOCK3-219ENST00000511905 GSPT1P15170 499 aaKnown RBP25.6■■□□□ 1.69
SPOCK3-219ENST00000511905 KIF2CQ99661 725 aa25.6■■□□□ 1.69
SPOCK3-219ENST00000511905 OSBPL3Q9H4L5 887 aa25.6■■□□□ 1.69
SPOCK3-219ENST00000511905 MIS18AQ9NYP9 233 aa25.6■■□□□ 1.69
SPOCK3-219ENST00000511905 GNAI3P08754 354 aa25.59■■□□□ 1.69
SPOCK3-219ENST00000511905 ADAMTSL3P82987 1691 aa25.59■■□□□ 1.69
SPOCK3-219ENST00000511905 LTN1O94822 1766 aa25.59■■□□□ 1.69
SPOCK3-219ENST00000511905 MED1Q15648 1581 aaPredicted RBP25.59■■□□□ 1.69
SPOCK3-219ENST00000511905 CEMIPQ8WUJ3 1361 aa25.59■■□□□ 1.69
SPOCK3-219ENST00000511905 IL17REQ8NFR9 667 aa25.58■■□□□ 1.69
SPOCK3-219ENST00000511905 GNAI2P04899 355 aa25.57■■□□□ 1.68
SPOCK3-219ENST00000511905 HOXB7P09629 217 aa25.57■■□□□ 1.68
SPOCK3-219ENST00000511905 G2E3Q7L622 706 aa25.57■■□□□ 1.68
SPOCK3-219ENST00000511905 SETD1BQ9UPS6 1966 aaKnown RBP25.57■■□□□ 1.68
SPOCK3-219ENST00000511905 FLIIQ13045 1269 aa25.56■■□□□ 1.68
SPOCK3-219ENST00000511905 NCAPD2Q15021 1401 aa25.55■■□□□ 1.68
SPOCK3-219ENST00000511905 MCM4P33991 863 aa25.54■■□□□ 1.68
SPOCK3-219ENST00000511905 CASC1Q6TDU7 716 aa25.54■■□□□ 1.68
SPOCK3-219ENST00000511905 OVOS2A0A0G2JMS6 1433 aa25.52■■□□□ 1.68
SPOCK3-219ENST00000511905 SLIT3O75094 1523 aa25.52■■□□□ 1.68
SPOCK3-219ENST00000511905 NUTM2GQ5VZR2 741 aa25.51■■□□□ 1.68
SPOCK3-219ENST00000511905 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
SPOCK3-219ENST00000511905 NPHP4O75161 1426 aaPredicted RBP25.51■■□□□ 1.67
SPOCK3-219ENST00000511905 RABEP1Q15276 862 aa25.51■■□□□ 1.67
SPOCK3-219ENST00000511905 ATP8B2P98198 1209 aa25.5■■□□□ 1.67
SPOCK3-219ENST00000511905 PSME1Q06323 249 aa25.5■■□□□ 1.67
SPOCK3-219ENST00000511905 LMO7Q8WWI1 1683 aa25.5■■□□□ 1.67
SPOCK3-219ENST00000511905 MST1RQ04912 1400 aa25.49■■□□□ 1.67
SPOCK3-219ENST00000511905 F6X3S4 739 aa25.49■■□□□ 1.67
SPOCK3-219ENST00000511905 K7ELQ4 463 aaPredicted RBP25.49■■□□□ 1.67
SPOCK3-219ENST00000511905 SLC4A10Q6U841 1118 aa25.49■■□□□ 1.67
SPOCK3-219ENST00000511905 C16orf71Q8IYS4 520 aaPredicted RBP25.49■■□□□ 1.67
SPOCK3-219ENST00000511905 HSP90AB1P08238 724 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms