RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 HSPA5P11021 654 aaKnown RBP13.77□□□□□ -0.21
COPS4-211ENST00000511891 MYOM1P52179 1685 aa13.77□□□□□ -0.21
COPS4-211ENST00000511891 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
COPS4-211ENST00000511891 RREB1Q92766 1687 aa13.76□□□□□ -0.21
COPS4-211ENST00000511891 NSD3Q9BZ95 1437 aa13.76□□□□□ -0.21
COPS4-211ENST00000511891 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
COPS4-211ENST00000511891 BCL9O00512 1426 aa13.75□□□□□ -0.21
COPS4-211ENST00000511891 KCNQ2O43526 872 aa13.75□□□□□ -0.21
COPS4-211ENST00000511891 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
COPS4-211ENST00000511891 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS4-211ENST00000511891 SRCAPQ6ZRS2 3230 aa13.74□□□□□ -0.21
COPS4-211ENST00000511891 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
COPS4-211ENST00000511891 PLSCR1O15162 318 aa13.73□□□□□ -0.21
COPS4-211ENST00000511891 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
COPS4-211ENST00000511891 PROM2Q8N271 834 aa13.73□□□□□ -0.21
COPS4-211ENST00000511891 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 LRP5O75197 1615 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 RGPD2P0DJD1 1756 aa13.72□□□□□ -0.21
COPS4-211ENST00000511891 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.21
COPS4-211ENST00000511891 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.21
COPS4-211ENST00000511891 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
COPS4-211ENST00000511891 EMILIN1Q9Y6C2 1016 aa13.71□□□□□ -0.21
COPS4-211ENST00000511891 FAM208AQ9UK61 1670 aaKnown RBP13.7□□□□□ -0.22
COPS4-211ENST00000511891 MEGF6O75095 1541 aa13.69□□□□□ -0.22
COPS4-211ENST00000511891 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
COPS4-211ENST00000511891 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
COPS4-211ENST00000511891 FLT4P35916 1363 aa13.69□□□□□ -0.22
COPS4-211ENST00000511891 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
COPS4-211ENST00000511891 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
COPS4-211ENST00000511891 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
COPS4-211ENST00000511891 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
COPS4-211ENST00000511891 INSRP06213 1382 aa13.68□□□□□ -0.22
COPS4-211ENST00000511891 SMG6Q86US8 1419 aaKnown RBP13.67□□□□□ -0.22
COPS4-211ENST00000511891 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
COPS4-211ENST00000511891 PANK3Q9H999 370 aa13.67□□□□□ -0.22
COPS4-211ENST00000511891 TNNT2P45379 298 aaPredicted RBP13.66□□□□□ -0.22
COPS4-211ENST00000511891 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
COPS4-211ENST00000511891 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.22
COPS4-211ENST00000511891 RAPGEF4Q8WZA2 1011 aa13.65□□□□□ -0.22
COPS4-211ENST00000511891 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
COPS4-211ENST00000511891 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.22
COPS4-211ENST00000511891 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
COPS4-211ENST00000511891 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
COPS4-211ENST00000511891 BTAF1O14981 1849 aa13.64□□□□□ -0.23
COPS4-211ENST00000511891 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
COPS4-211ENST00000511891 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
COPS4-211ENST00000511891 POLKQ9UBT6 870 aa13.64□□□□□ -0.23
COPS4-211ENST00000511891 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
COPS4-211ENST00000511891 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
COPS4-211ENST00000511891 SPON1Q9HCB6 807 aa13.62□□□□□ -0.23
COPS4-211ENST00000511891 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
COPS4-211ENST00000511891 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
COPS4-211ENST00000511891 NSD2O96028 1365 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 KCNQ4P56696 695 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 MAP2P11137 1827 aaKnown RBP13.61□□□□□ -0.23
COPS4-211ENST00000511891 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 ANKRD26Q9UPS8 1709 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 KIF7Q2M1P5 1343 aa13.61□□□□□ -0.23
COPS4-211ENST00000511891 ZNF827Q17R98 1081 aa13.6□□□□□ -0.23
COPS4-211ENST00000511891 EYA1Q99502 592 aa13.6□□□□□ -0.23
COPS4-211ENST00000511891 CASZ1Q86V15 1759 aa13.6□□□□□ -0.23
COPS4-211ENST00000511891 CYP27B1O15528 508 aa13.59□□□□□ -0.23
COPS4-211ENST00000511891 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
COPS4-211ENST00000511891 PCDH11XQ9BZA7 1347 aa13.59□□□□□ -0.23
COPS4-211ENST00000511891 PCDH11YQ9BZA8 1340 aa13.59□□□□□ -0.23
COPS4-211ENST00000511891 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
COPS4-211ENST00000511891 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
COPS4-211ENST00000511891 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
COPS4-211ENST00000511891 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
COPS4-211ENST00000511891 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
COPS4-211ENST00000511891 PTGER2P43116 358 aa13.55□□□□□ -0.24
COPS4-211ENST00000511891 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
COPS4-211ENST00000511891 PKD1L3Q7Z443 1732 aa13.54□□□□□ -0.24
COPS4-211ENST00000511891 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
COPS4-211ENST00000511891 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
COPS4-211ENST00000511891 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
COPS4-211ENST00000511891 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
COPS4-211ENST00000511891 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
COPS4-211ENST00000511891 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
COPS4-211ENST00000511891 LY75O60449 1722 aa13.53□□□□□ -0.24
COPS4-211ENST00000511891 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
COPS4-211ENST00000511891 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
COPS4-211ENST00000511891 MTFR1LQ9H019 292 aa13.52□□□□□ -0.25
COPS4-211ENST00000511891 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
COPS4-211ENST00000511891 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
COPS4-211ENST00000511891 PIGBQ92521 554 aa13.51□□□□□ -0.25
COPS4-211ENST00000511891 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
COPS4-211ENST00000511891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
COPS4-211ENST00000511891 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
COPS4-211ENST00000511891 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
COPS4-211ENST00000511891 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
COPS4-211ENST00000511891 PHKG2P15735 406 aa13.5□□□□□ -0.25
COPS4-211ENST00000511891 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
COPS4-211ENST00000511891 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
COPS4-211ENST00000511891 ITGB4P16144 1822 aa13.49□□□□□ -0.25
COPS4-211ENST00000511891 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms