RNA–Protein interactions for RNA: ENST00000511850.1

TMEM173-209, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 890 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-209ENST00000511850 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
TMEM173-209ENST00000511850 SHANK3Q9BYB0 1731 aa23.28■■□□□ 1.32
TMEM173-209ENST00000511850 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
TMEM173-209ENST00000511850 MARCH10Q8NA82 808 aaPredicted RBP23.27■■□□□ 1.32
TMEM173-209ENST00000511850 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
TMEM173-209ENST00000511850 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
TMEM173-209ENST00000511850 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
TMEM173-209ENST00000511850 SBF2Q86WG5 1849 aa23.25■■□□□ 1.31
TMEM173-209ENST00000511850 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
TMEM173-209ENST00000511850 KDRP35968 1356 aa23.24■■□□□ 1.31
TMEM173-209ENST00000511850 DDX54Q8TDD1 881 aaKnown RBP23.23■■□□□ 1.31
TMEM173-209ENST00000511850 NUDCQ9Y266 331 aa23.23■■□□□ 1.31
TMEM173-209ENST00000511850 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
TMEM173-209ENST00000511850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.22■■□□□ 1.31
TMEM173-209ENST00000511850 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
TMEM173-209ENST00000511850 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
TMEM173-209ENST00000511850 TRIM37O94972 964 aa23.21■■□□□ 1.31
TMEM173-209ENST00000511850 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
TMEM173-209ENST00000511850 BAG6P46379 1132 aa23.2■■□□□ 1.3
TMEM173-209ENST00000511850 AEBP1Q8IUX7 1158 aa23.19■■□□□ 1.3
TMEM173-209ENST00000511850 EP400Q96L91 3159 aa23.19■■□□□ 1.3
TMEM173-209ENST00000511850 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
TMEM173-209ENST00000511850 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
TMEM173-209ENST00000511850 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
TMEM173-209ENST00000511850 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
TMEM173-209ENST00000511850 HMOX1P09601 288 aa23.16■■□□□ 1.3
TMEM173-209ENST00000511850 BCL11BQ9C0K0 894 aaPredicted RBP23.16■■□□□ 1.3
TMEM173-209ENST00000511850 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.3
TMEM173-209ENST00000511850 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.3
TMEM173-209ENST00000511850 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.29
TMEM173-209ENST00000511850 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.29
TMEM173-209ENST00000511850 CYP27B1O15528 508 aa23.13■■□□□ 1.29
TMEM173-209ENST00000511850 APBA3O96018 575 aa23.13■■□□□ 1.29
TMEM173-209ENST00000511850 ACSBG1Q96GR2 724 aa23.13■■□□□ 1.29
TMEM173-209ENST00000511850 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
TMEM173-209ENST00000511850 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
TMEM173-209ENST00000511850 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
TMEM173-209ENST00000511850 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
TMEM173-209ENST00000511850 BTAF1O14981 1849 aa23.1■■□□□ 1.29
TMEM173-209ENST00000511850 ANP32CO43423 234 aa23.1■■□□□ 1.29
TMEM173-209ENST00000511850 PHKG2P15735 406 aa23.1■■□□□ 1.29
TMEM173-209ENST00000511850 C1orf141Q5JVX7 400 aa23.1■■□□□ 1.29
TMEM173-209ENST00000511850 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
TMEM173-209ENST00000511850 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
TMEM173-209ENST00000511850 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
TMEM173-209ENST00000511850 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.29
TMEM173-209ENST00000511850 KCNQ2O43526 872 aa23.07■■□□□ 1.28
TMEM173-209ENST00000511850 EN1Q05925 392 aaPredicted RBP23.07■■□□□ 1.28
TMEM173-209ENST00000511850 RREB1Q92766 1687 aa23.06■■□□□ 1.28
TMEM173-209ENST00000511850 FCHSD2O94868 740 aa23.06■■□□□ 1.28
TMEM173-209ENST00000511850 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
TMEM173-209ENST00000511850 ITGB4P16144 1822 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 PLSCR1O15162 318 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 NEFMP07197 916 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 PRIM1P49642 420 aaKnown RBP23.05■■□□□ 1.28
TMEM173-209ENST00000511850 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 DCAF5Q96JK2 942 aa23.05■■□□□ 1.28
TMEM173-209ENST00000511850 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
TMEM173-209ENST00000511850 AKAP4Q5JQC9 854 aa23.04■■□□□ 1.28
TMEM173-209ENST00000511850 PTF1AQ7RTS3 328 aa23.03■■□□□ 1.28
TMEM173-209ENST00000511850 CAMKK2Q96RR4 588 aa23.03■■□□□ 1.28
TMEM173-209ENST00000511850 EZH2Q15910 746 aaKnown RBP23.02■■□□□ 1.28
TMEM173-209ENST00000511850 SCN11AQ9UI33 1791 aa23.01■■□□□ 1.27
TMEM173-209ENST00000511850 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMEM173-209ENST00000511850 MTHFSDQ2M296 383 aaKnown RBP23.01■■□□□ 1.27
TMEM173-209ENST00000511850 NUP188Q5SRE5 1749 aa23.01■■□□□ 1.27
TMEM173-209ENST00000511850 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
TMEM173-209ENST00000511850 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
TMEM173-209ENST00000511850 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
TMEM173-209ENST00000511850 ERVV-2B6SEH9 535 aa22.99■■□□□ 1.27
TMEM173-209ENST00000511850 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
TMEM173-209ENST00000511850 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
TMEM173-209ENST00000511850 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
TMEM173-209ENST00000511850 LY75O60449 1722 aa22.97■■□□□ 1.27
TMEM173-209ENST00000511850 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
TMEM173-209ENST00000511850 SMARCC1Q92922 1105 aaPredicted RBP22.96■■□□□ 1.27
TMEM173-209ENST00000511850 CABP4P57796 275 aa22.95■■□□□ 1.26
TMEM173-209ENST00000511850 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
TMEM173-209ENST00000511850 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
TMEM173-209ENST00000511850 MRC1P22897 1456 aa22.94■■□□□ 1.26
TMEM173-209ENST00000511850 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
TMEM173-209ENST00000511850 PALLDQ8WX93 1383 aa22.93■■□□□ 1.26
TMEM173-209ENST00000511850 HMGB2P26583 209 aaKnown RBP22.93■■□□□ 1.26
TMEM173-209ENST00000511850 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
TMEM173-209ENST00000511850 PIGBQ92521 554 aa22.93■■□□□ 1.26
TMEM173-209ENST00000511850 RNMTO43148 476 aaKnown RBP22.92■■□□□ 1.26
TMEM173-209ENST00000511850 SLC27A3Q5K4L6 730 aa22.92■■□□□ 1.26
TMEM173-209ENST00000511850 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
TMEM173-209ENST00000511850 RTF1Q92541 710 aaKnown RBP22.9■■□□□ 1.26
TMEM173-209ENST00000511850 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
TMEM173-209ENST00000511850 SLC52A2Q9HAB3 445 aa22.89■■□□□ 1.25
TMEM173-209ENST00000511850 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
TMEM173-209ENST00000511850 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
TMEM173-209ENST00000511850 PROM2Q8N271 834 aa22.88■■□□□ 1.25
TMEM173-209ENST00000511850 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
TMEM173-209ENST00000511850 PAPPAQ13219 1627 aa22.87■■□□□ 1.25
TMEM173-209ENST00000511850 TEFQ10587 303 aa22.87■■□□□ 1.25
TMEM173-209ENST00000511850 NFE2L2Q16236 605 aa22.87■■□□□ 1.25
TMEM173-209ENST00000511850 LGR6Q9HBX8 967 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms