RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
CDH9-204ENST00000511822 FOXC1Q12948 553 aa10.63□□□□□ -0.71
CDH9-204ENST00000511822 TRIM32Q13049 653 aa10.63□□□□□ -0.71
CDH9-204ENST00000511822 MED14O60244 1454 aa10.62□□□□□ -0.71
CDH9-204ENST00000511822 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
CDH9-204ENST00000511822 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
CDH9-204ENST00000511822 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
CDH9-204ENST00000511822 MTMR2Q13614 643 aa10.62□□□□□ -0.71
CDH9-204ENST00000511822 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
CDH9-204ENST00000511822 TNRQ92752 1358 aa10.62□□□□□ -0.71
CDH9-204ENST00000511822 PZPP20742 1482 aa10.61□□□□□ -0.71
CDH9-204ENST00000511822 POLR1AO95602 1720 aaPredicted RBP10.61□□□□□ -0.71
CDH9-204ENST00000511822 SPTLC1O15269 473 aa10.61□□□□□ -0.71
CDH9-204ENST00000511822 DEPDC5O75140 1603 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 SPDYE5A6NIY4 337 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 DGAT1O75907 488 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 PRR7Q8TB68 274 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 NLRP1Q9C000 1473 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
CDH9-204ENST00000511822 RTEL1-TNFRSF6BF6WH68 1400 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 KDM5DQ9BY66 1539 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 HNRNPMP52272 730 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDH9-204ENST00000511822 GGT6Q6P531 493 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 RIC3Q7Z5B4 369 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 PCDHB15Q9Y5E8 787 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 SYNMO15061 1565 aa10.59□□□□□ -0.71
CDH9-204ENST00000511822 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
CDH9-204ENST00000511822 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
CDH9-204ENST00000511822 ZNF777Q9ULD5 760 aaPredicted RBP10.58□□□□□ -0.72
CDH9-204ENST00000511822 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
CDH9-204ENST00000511822 MBD5Q9P267 1494 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
CDH9-204ENST00000511822 WNT7AO00755 349 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 PTPRNQ16849 979 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 DESI1Q6ICB0 168 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 ANKLE2Q86XL3 938 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 TOR4AQ9NXH8 423 aa10.57□□□□□ -0.72
CDH9-204ENST00000511822 CFDP1Q9UEE9 299 aaPredicted RBP10.57□□□□□ -0.72
CDH9-204ENST00000511822 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
CDH9-204ENST00000511822 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
CDH9-204ENST00000511822 PRPF38BQ5VTL8 546 aaKnown RBP10.56□□□□□ -0.72
CDH9-204ENST00000511822 LRRC7Q96NW7 1537 aa10.56□□□□□ -0.72
CDH9-204ENST00000511822 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
CDH9-204ENST00000511822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH9-204ENST00000511822 HRCP23327 699 aa10.55□□□□□ -0.72
CDH9-204ENST00000511822 MYT1Q01538 1121 aa10.55□□□□□ -0.72
CDH9-204ENST00000511822 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
CDH9-204ENST00000511822 THEMISQ8N1K5 641 aaPredicted RBP10.55□□□□□ -0.72
CDH9-204ENST00000511822 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
CDH9-204ENST00000511822 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
CDH9-204ENST00000511822 UGGT1Q9NYU2 1555 aa10.55□□□□□ -0.72
CDH9-204ENST00000511822 CYP4X1Q8N118 509 aa10.54□□□□□ -0.72
CDH9-204ENST00000511822 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 CFAP99D6REC4 459 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 WNT7BP56706 349 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 SKOR1P84550 965 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 FBXO31Q5XUX0 539 aaPredicted RBP10.53□□□□□ -0.72
CDH9-204ENST00000511822 CABLES1Q8TDN4 633 aa10.53□□□□□ -0.72
CDH9-204ENST00000511822 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
CDH9-204ENST00000511822 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
CDH9-204ENST00000511822 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
CDH9-204ENST00000511822 EVA1BQ9NVM1 165 aa10.52□□□□□ -0.73
CDH9-204ENST00000511822 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
CDH9-204ENST00000511822 GPBP1L1Q9HC44 474 aaPredicted RBP10.51□□□□□ -0.73
CDH9-204ENST00000511822 CCDC141Q6ZP82 1450 aa10.5□□□□□ -0.73
CDH9-204ENST00000511822 QPCTQ16769 361 aa10.5□□□□□ -0.73
CDH9-204ENST00000511822 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
CDH9-204ENST00000511822 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
CDH9-204ENST00000511822 SNIP1Q8TAD8 396 aaKnown RBP10.5□□□□□ -0.73
CDH9-204ENST00000511822 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
CDH9-204ENST00000511822 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
CDH9-204ENST00000511822 TTC24A2A3L6 582 aaPredicted RBP10.49□□□□□ -0.73
CDH9-204ENST00000511822 KIF3BO15066 747 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
CDH9-204ENST00000511822 KCNH2Q12809 1159 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 UNC93B1Q9H1C4 597 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 WASHC2CQ9Y4E1 1318 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 STRCP1A6NGW2 1772 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 FAM135BQ49AJ0 1406 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
CDH9-204ENST00000511822 EHBP1L1Q8N3D4 1523 aa10.48□□□□□ -0.73
CDH9-204ENST00000511822 LILRB3O75022 631 aa10.48□□□□□ -0.73
CDH9-204ENST00000511822 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
CDH9-204ENST00000511822 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
CDH9-204ENST00000511822 AVPP01185 164 aa10.47□□□□□ -0.73
CDH9-204ENST00000511822 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
CDH9-204ENST00000511822 SCAF11Q99590 1463 aaKnown RBP10.47□□□□□ -0.73
CDH9-204ENST00000511822 ARHGAP23Q9P227 1491 aa10.47□□□□□ -0.73
CDH9-204ENST00000511822 ABCC3O15438 1527 aa10.47□□□□□ -0.73
CDH9-204ENST00000511822 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
CDH9-204ENST00000511822 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
CDH9-204ENST00000511822 ST8SIA5O15466 376 aa10.46□□□□□ -0.73
CDH9-204ENST00000511822 SMPD1P17405 629 aa10.46□□□□□ -0.73
CDH9-204ENST00000511822 NUTM2DQ5VT03 806 aaPredicted RBP10.46□□□□□ -0.73
CDH9-204ENST00000511822 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms