RNA–Protein interactions for RNA: ENST00000511810.5

SDHA-214, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 3,001 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-214ENST00000511810 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.36
SDHA-214ENST00000511810 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.36
SDHA-214ENST00000511810 ABCC4O15439 1325 aa12.77□□□□□ -0.37
SDHA-214ENST00000511810 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.37
SDHA-214ENST00000511810 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
SDHA-214ENST00000511810 LTN1O94822 1766 aa12.76□□□□□ -0.37
SDHA-214ENST00000511810 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
SDHA-214ENST00000511810 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
SDHA-214ENST00000511810 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
SDHA-214ENST00000511810 NBR1Q14596 966 aa12.75□□□□□ -0.37
SDHA-214ENST00000511810 USP19O94966 1318 aa12.75□□□□□ -0.37
SDHA-214ENST00000511810 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
SDHA-214ENST00000511810 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
SDHA-214ENST00000511810 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
SDHA-214ENST00000511810 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
SDHA-214ENST00000511810 MYT1Q01538 1121 aa12.74□□□□□ -0.37
SDHA-214ENST00000511810 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
SDHA-214ENST00000511810 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
SDHA-214ENST00000511810 KIAA0232Q92628 1395 aa12.73□□□□□ -0.37
SDHA-214ENST00000511810 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
SDHA-214ENST00000511810 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
SDHA-214ENST00000511810 NFAT5O94916 1531 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 IP6K1Q92551 441 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 RGS12O14924 1447 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
SDHA-214ENST00000511810 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
SDHA-214ENST00000511810 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
SDHA-214ENST00000511810 G2E3Q7L622 706 aa12.7□□□□□ -0.38
SDHA-214ENST00000511810 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
SDHA-214ENST00000511810 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
SDHA-214ENST00000511810 MSH6P52701 1360 aa12.7□□□□□ -0.38
SDHA-214ENST00000511810 NUCB1Q02818 461 aa12.7□□□□□ -0.38
SDHA-214ENST00000511810 GCP02774 474 aa12.7□□□□□ -0.38
SDHA-214ENST00000511810 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
SDHA-214ENST00000511810 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
SDHA-214ENST00000511810 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
SDHA-214ENST00000511810 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
SDHA-214ENST00000511810 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SDHA-214ENST00000511810 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
SDHA-214ENST00000511810 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
SDHA-214ENST00000511810 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
SDHA-214ENST00000511810 CHD1LQ86WJ1 897 aa12.68□□□□□ -0.38
SDHA-214ENST00000511810 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
SDHA-214ENST00000511810 F6X3S4 739 aa12.68□□□□□ -0.38
SDHA-214ENST00000511810 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
SDHA-214ENST00000511810 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
SDHA-214ENST00000511810 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
SDHA-214ENST00000511810 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
SDHA-214ENST00000511810 C1orf167Q5SNV9 1468 aa12.67□□□□□ -0.38
SDHA-214ENST00000511810 ARHGEF25Q86VW2 580 aa12.67□□□□□ -0.38
SDHA-214ENST00000511810 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
SDHA-214ENST00000511810 PTPRCP08575 1304 aa12.66□□□□□ -0.38
SDHA-214ENST00000511810 HSPA2P54652 639 aa12.66□□□□□ -0.38
SDHA-214ENST00000511810 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
SDHA-214ENST00000511810 MEIS3Q99687 375 aa12.66□□□□□ -0.38
SDHA-214ENST00000511810 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
SDHA-214ENST00000511810 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
SDHA-214ENST00000511810 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
SDHA-214ENST00000511810 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
SDHA-214ENST00000511810 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
SDHA-214ENST00000511810 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
SDHA-214ENST00000511810 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
SDHA-214ENST00000511810 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
SDHA-214ENST00000511810 SLIT3O75094 1523 aa12.64□□□□□ -0.39
SDHA-214ENST00000511810 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
SDHA-214ENST00000511810 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
SDHA-214ENST00000511810 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
SDHA-214ENST00000511810 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
SDHA-214ENST00000511810 MFAP1P55081 439 aaKnown RBP12.63□□□□□ -0.39
SDHA-214ENST00000511810 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
SDHA-214ENST00000511810 UPF2Q9HAU5 1272 aaKnown RBP12.63□□□□□ -0.39
SDHA-214ENST00000511810 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
SDHA-214ENST00000511810 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
SDHA-214ENST00000511810 ATF3P18847 181 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
SDHA-214ENST00000511810 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
SDHA-214ENST00000511810 FLIIQ13045 1269 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 CEP85Q6P2H3 762 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 KCNQ3O43525 872 aa12.62□□□□□ -0.39
SDHA-214ENST00000511810 MST1RQ04912 1400 aa12.61□□□□□ -0.39
SDHA-214ENST00000511810 FKBP5Q13451 457 aaPredicted RBP12.61□□□□□ -0.39
SDHA-214ENST00000511810 DCTPP1Q9H773 170 aa12.61□□□□□ -0.39
SDHA-214ENST00000511810 PXDNQ92626 1479 aa12.61□□□□□ -0.39
SDHA-214ENST00000511810 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
SDHA-214ENST00000511810 APBB1O00213 710 aa12.6□□□□□ -0.39
SDHA-214ENST00000511810 PLEKHO1Q53GL0 409 aaPredicted RBP12.6□□□□□ -0.39
SDHA-214ENST00000511810 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
SDHA-214ENST00000511810 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
SDHA-214ENST00000511810 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
SDHA-214ENST00000511810 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
SDHA-214ENST00000511810 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms