RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 TAF1LQ8IZX4 1826 aa17.42■□□□□ 0.38
COPS4-210ENST00000511708 C5P01031 1676 aa17.42■□□□□ 0.38
COPS4-210ENST00000511708 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
COPS4-210ENST00000511708 PCNTO95613 3336 aa17.41■□□□□ 0.38
COPS4-210ENST00000511708 MSH5O43196 834 aa17.41■□□□□ 0.38
COPS4-210ENST00000511708 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
COPS4-210ENST00000511708 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
COPS4-210ENST00000511708 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
COPS4-210ENST00000511708 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
COPS4-210ENST00000511708 EVC2Q86UK5 1308 aa17.4■□□□□ 0.38
COPS4-210ENST00000511708 TOMM70O94826 608 aa17.39■□□□□ 0.37
COPS4-210ENST00000511708 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
COPS4-210ENST00000511708 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
COPS4-210ENST00000511708 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
COPS4-210ENST00000511708 JMYQ8N9B5 988 aa17.37■□□□□ 0.37
COPS4-210ENST00000511708 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
COPS4-210ENST00000511708 PRELPP51888 382 aa17.36■□□□□ 0.37
COPS4-210ENST00000511708 CAPN15O75808 1086 aa17.35■□□□□ 0.37
COPS4-210ENST00000511708 UBR3Q6ZT12 1888 aa17.34■□□□□ 0.37
COPS4-210ENST00000511708 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
COPS4-210ENST00000511708 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
COPS4-210ENST00000511708 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
COPS4-210ENST00000511708 USP47Q96K76 1375 aa17.33■□□□□ 0.36
COPS4-210ENST00000511708 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 NME9Q86XW9 330 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 TNS4Q8IZW8 715 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 KIAA1551Q9HCM1 1747 aa17.32■□□□□ 0.36
COPS4-210ENST00000511708 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
COPS4-210ENST00000511708 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
COPS4-210ENST00000511708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.31■□□□□ 0.36
COPS4-210ENST00000511708 IP6K1Q92551 441 aa17.3■□□□□ 0.36
COPS4-210ENST00000511708 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
COPS4-210ENST00000511708 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
COPS4-210ENST00000511708 RBM46Q8TBY0 533 aaKnown RBP17.29■□□□□ 0.36
COPS4-210ENST00000511708 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
COPS4-210ENST00000511708 MEGF6O75095 1541 aa17.29■□□□□ 0.36
COPS4-210ENST00000511708 HMGB2P26583 209 aaKnown RBP17.28■□□□□ 0.36
COPS4-210ENST00000511708 HTRA3P83110 453 aa17.28■□□□□ 0.36
COPS4-210ENST00000511708 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
COPS4-210ENST00000511708 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
COPS4-210ENST00000511708 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
COPS4-210ENST00000511708 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
COPS4-210ENST00000511708 ITGB4P16144 1822 aa17.25■□□□□ 0.35
COPS4-210ENST00000511708 PALLDQ8WX93 1383 aa17.25■□□□□ 0.35
COPS4-210ENST00000511708 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
COPS4-210ENST00000511708 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
COPS4-210ENST00000511708 FSTL1Q12841 308 aa17.23■□□□□ 0.35
COPS4-210ENST00000511708 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
COPS4-210ENST00000511708 PKD1L3Q7Z443 1732 aa17.22■□□□□ 0.35
COPS4-210ENST00000511708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
COPS4-210ENST00000511708 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
COPS4-210ENST00000511708 AK7Q96M32 723 aa17.21■□□□□ 0.35
COPS4-210ENST00000511708 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
COPS4-210ENST00000511708 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
COPS4-210ENST00000511708 SLC34A2O95436 690 aa17.2■□□□□ 0.34
COPS4-210ENST00000511708 SSFA2P28290 1259 aa17.2■□□□□ 0.34
COPS4-210ENST00000511708 HOXC9P31274 260 aa17.2■□□□□ 0.34
COPS4-210ENST00000511708 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
COPS4-210ENST00000511708 PHF14O94880 888 aa17.19■□□□□ 0.34
COPS4-210ENST00000511708 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
COPS4-210ENST00000511708 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
COPS4-210ENST00000511708 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
COPS4-210ENST00000511708 TGFB2P61812 414 aa17.17■□□□□ 0.34
COPS4-210ENST00000511708 HDGFL2Q7Z4V5 671 aaPredicted RBP17.17■□□□□ 0.34
COPS4-210ENST00000511708 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
COPS4-210ENST00000511708 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
COPS4-210ENST00000511708 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
COPS4-210ENST00000511708 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
COPS4-210ENST00000511708 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
COPS4-210ENST00000511708 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
COPS4-210ENST00000511708 SBF1O95248 1867 aa17.16■□□□□ 0.34
COPS4-210ENST00000511708 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
COPS4-210ENST00000511708 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
COPS4-210ENST00000511708 MMP10P09238 476 aa17.15■□□□□ 0.34
COPS4-210ENST00000511708 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
COPS4-210ENST00000511708 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
COPS4-210ENST00000511708 A0A0G2JLW4 131 aa17.14■□□□□ 0.33
COPS4-210ENST00000511708 HSPA1AP0DMV8 641 aaKnown RBP17.14■□□□□ 0.33
COPS4-210ENST00000511708 HSPA1BP0DMV9 641 aaKnown RBP17.14■□□□□ 0.33
COPS4-210ENST00000511708 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
COPS4-210ENST00000511708 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
COPS4-210ENST00000511708 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
COPS4-210ENST00000511708 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
COPS4-210ENST00000511708 LINC00116Q8NCU8 138 aa17.13■□□□□ 0.33
COPS4-210ENST00000511708 L3MBTL2Q969R5 705 aa17.13■□□□□ 0.33
COPS4-210ENST00000511708 RTL1A6NKG5 1358 aa17.13■□□□□ 0.33
COPS4-210ENST00000511708 AMPHP49418 695 aa17.12■□□□□ 0.33
COPS4-210ENST00000511708 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
COPS4-210ENST00000511708 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
COPS4-210ENST00000511708 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
COPS4-210ENST00000511708 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
COPS4-210ENST00000511708 CYP27B1O15528 508 aa17.11■□□□□ 0.33
COPS4-210ENST00000511708 FBLN1P23142 703 aa17.11■□□□□ 0.33
COPS4-210ENST00000511708 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
COPS4-210ENST00000511708 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
COPS4-210ENST00000511708 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
COPS4-210ENST00000511708 FCHSD2O94868 740 aa17.1■□□□□ 0.33
COPS4-210ENST00000511708 DPEP1P16444 411 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms